RNA–Protein interactions for RNA: YPL173W

MRPL40, Transcript of Mitochondrial ribosomal protein of the large subunit, yeastyeast

Gene MRPL40, Length 894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MRPL40YPL173W SNF5P18480 905 aa4.57□□□□□ -1.68
MRPL40YPL173W AFG2P32794 780 aa4.57□□□□□ -1.68
MRPL40YPL173W PRP40P33203 583 aaKnown RBP4.57□□□□□ -1.68
MRPL40YPL173W GRS1P38088 690 aaKnown RBP4.57□□□□□ -1.68
MRPL40YPL173W PIK1P39104 1066 aa4.57□□□□□ -1.68
MRPL40YPL173W GPB2P39717 880 aa4.57□□□□□ -1.68
MRPL40YPL173W RSM26P47141 266 aa4.57□□□□□ -1.68
MRPL40YPL173W PHO23P50947 330 aa4.57□□□□□ -1.68
MRPL40YPL173W HOS3Q02959 697 aaKnown RBP4.57□□□□□ -1.68
MRPL40YPL173W RSB1Q08417 382 aa4.57□□□□□ -1.68
MRPL40YPL173W MSC6Q08818 692 aaKnown RBP4.57□□□□□ -1.68
MRPL40YPL173W YHL050CP38721 697 aa4.56□□□□□ -1.68
MRPL40YPL173W PEX28P38848 579 aa4.56□□□□□ -1.68
MRPL40YPL173W YHR219WP38900 624 aa4.56□□□□□ -1.68
MRPL40YPL173W NUT2Q06213 157 aa4.56□□□□□ -1.68
MRPL40YPL173W RRP15Q06511 250 aaPredicted RBP4.56□□□□□ -1.68
MRPL40YPL173W GPB1Q08886 897 aa4.56□□□□□ -1.68
MRPL40YPL173W HEM13P11353 328 aaKnown RBP4.55□□□□□ -1.68
MRPL40YPL173W CMP2P14747 604 aa4.55□□□□□ -1.68
MRPL40YPL173W PAM1P37304 830 aaKnown RBP4.55□□□□□ -1.68
MRPL40YPL173W ULP1Q02724 621 aa4.55□□□□□ -1.68
MRPL40YPL173W URN1Q06525 465 aaKnown RBP4.55□□□□□ -1.68
MRPL40YPL173W RIB2Q12362 591 aaKnown RBP4.55□□□□□ -1.68
MRPL40YPL173W PMA1P05030 918 aaKnown RBP4.54□□□□□ -1.68
MRPL40YPL173W SEC20P28791 383 aa4.54□□□□□ -1.68
MRPL40YPL173W SQT1P35184 431 aa4.54□□□□□ -1.68
MRPL40YPL173W YGL140CP53120 1219 aa4.54□□□□□ -1.68
MRPL40YPL173W SNU71P53207 620 aaKnown RBP4.54□□□□□ -1.68
MRPL40YPL173W RSM24Q03976 319 aa4.54□□□□□ -1.68
MRPL40YPL173W WHI5Q12416 295 aa4.54□□□□□ -1.68
MRPL40YPL173W PPX1P38698 397 aa4.53□□□□□ -1.68
MRPL40YPL173W RPN3P40016 523 aaKnown RBP4.53□□□□□ -1.68
MRPL40YPL173W VPS62P53285 467 aa4.53□□□□□ -1.68
MRPL40YPL173W KIN4Q01919 800 aa4.53□□□□□ -1.68
MRPL40YPL173W KAR2P16474 682 aaKnown RBP4.52□□□□□ -1.69
MRPL40YPL173W ATE1P16639 503 aa4.52□□□□□ -1.69
MRPL40YPL173W ORC1P54784 914 aaPredicted RBP4.52□□□□□ -1.69
MRPL40YPL173W YAP6Q03935 383 aa4.52□□□□□ -1.69
MRPL40YPL173W EST2Q06163 884 aa4.52□□□□□ -1.69
MRPL40YPL173W PTC5Q12511 572 aa4.52□□□□□ -1.69
MRPL40YPL173W DEF1P35732 738 aaKnown RBP4.51□□□□□ -1.69
MRPL40YPL173W RFC5P38251 354 aa4.51□□□□□ -1.69
MRPL40YPL173W PBP1P53297 722 aaKnown RBP4.51□□□□□ -1.69
MRPL40YPL173W SEC23P15303 768 aaKnown RBP4.5□□□□□ -1.69
MRPL40YPL173W ASF1P32447 279 aa4.5□□□□□ -1.69
MRPL40YPL173W DCG1P32460 244 aa4.5□□□□□ -1.69
MRPL40YPL173W ALG3P38179 458 aa4.5□□□□□ -1.69
MRPL40YPL173W NOP7P53261 605 aaKnown RBP4.5□□□□□ -1.69
MRPL40YPL173W DAL4Q04895 635 aa4.5□□□□□ -1.69
MRPL40YPL173W YLR224WQ05947 369 aa4.5□□□□□ -1.69
MRPL40YPL173W MSS4P38994 779 aa4.49□□□□□ -1.69
MRPL40YPL173W POL32P47110 350 aa4.49□□□□□ -1.69
MRPL40YPL173W VTS1Q08831 523 aaKnown RBP RIP-Chip data4.49□□□□□ -1.69not detected
MRPL40YPL173W HMI1Q12039 706 aa4.49□□□□□ -1.69
MRPL40YPL173W MET4P32389 672 aa4.48□□□□□ -1.69
MRPL40YPL173W YFL054CP43549 646 aa4.48□□□□□ -1.69
MRPL40YPL173W DAK2P43550 591 aa4.48□□□□□ -1.69
MRPL40YPL173W SIZ1Q04195 904 aa4.48□□□□□ -1.69
MRPL40YPL173W YPL260WQ08977 551 aa4.48□□□□□ -1.69
MRPL40YPL173W EMC1P25574 760 aa4.47□□□□□ -1.69
MRPL40YPL173W VPS35P34110 944 aa4.47□□□□□ -1.69
MRPL40YPL173W YPL109CQ02981 657 aa4.47□□□□□ -1.69
MRPL40YPL173W ADI1Q03677 179 aa4.47□□□□□ -1.69
MRPL40YPL173W TOS4Q06266 489 aa4.47□□□□□ -1.69
MRPL40YPL173W PHO4P07270 312 aaKnown RBP4.46□□□□□ -1.7
MRPL40YPL173W MET10P39692 1035 aa4.46□□□□□ -1.7
MRPL40YPL173W GTF1P53260 183 aaPredicted RBP4.46□□□□□ -1.7
MRPL40YPL173W PPM2Q08282 695 aa4.46□□□□□ -1.7
MRPL40YPL173W KIN2P13186 1147 aaKnown RBP4.45□□□□□ -1.7
MRPL40YPL173W THI12P42883 340 aa4.45□□□□□ -1.7
MRPL40YPL173W THI5P43534 340 aa4.45□□□□□ -1.7
MRPL40YPL173W YJR107WP47145 328 aa4.45□□□□□ -1.7
MRPL40YPL173W THI11P47183 340 aa4.45□□□□□ -1.7
MRPL40YPL173W MAP1Q01662 387 aaKnown RBP RIP-Chip data4.45□□□□□ -1.7not detected
MRPL40YPL173W THI13Q07748 340 aa4.45□□□□□ -1.7
MRPL40YPL173W NOP12Q08208 459 aaKnown RBP4.45□□□□□ -1.7
MRPL40YPL173W SVS1Q12254 260 aa4.45□□□□□ -1.7
MRPL40YPL173W DED1P06634 604 aaKnown RBP4.44□□□□□ -1.7
MRPL40YPL173W APL1P27351 700 aa4.44□□□□□ -1.7
MRPL40YPL173W GCD6P32501 712 aaKnown RBP4.44□□□□□ -1.7
MRPL40YPL173W SEC8P32855 1065 aa4.44□□□□□ -1.7
MRPL40YPL173W SIP5P40210 489 aaKnown RBP4.44□□□□□ -1.7
MRPL40YPL173W GCV2P49095 1034 aa4.44□□□□□ -1.7
MRPL40YPL173W OAR1P35731 278 aa4.43□□□□□ -1.7
MRPL40YPL173W MOH1P38191 138 aa4.43□□□□□ -1.7
MRPL40YPL173W OYE2Q03558 400 aaKnown RBP4.42□□□□□ -1.7
MRPL40YPL173W PLB1P39105 664 aa4.41□□□□□ -1.7
MRPL40YPL173W PIC2P40035 300 aa4.41□□□□□ -1.7
MRPL40YPL173W RAT1Q02792 1006 aaKnown RBP4.41□□□□□ -1.7
MRPL40YPL173W MSC2Q03455 724 aa4.41□□□□□ -1.7
MRPL40YPL173W ATG13Q06628 738 aa4.41□□□□□ -1.7
MRPL40YPL173W MGE1P38523 228 aa4.4□□□□□ -1.71
MRPL40YPL173W FAA3P39002 694 aa4.4□□□□□ -1.71
MRPL40YPL173W FYV10P40492 516 aa4.4□□□□□ -1.71
MRPL40YPL173W TAF13P11747 167 aa4.39□□□□□ -1.71
MRPL40YPL173W SVF1Q05515 481 aa4.39□□□□□ -1.71
MRPL40YPL173W YER152CP10356 443 aa4.38□□□□□ -1.71
MRPL40YPL173W ROD1Q02805 837 aa4.38□□□□□ -1.71
MRPL40YPL173W OXR1Q08952 273 aa4.38□□□□□ -1.71
MRPL40YPL173W HRR25P29295 494 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 93.4 ms