RNA–Protein interactions for RNA: YPL104W

MSD1, Transcript of Mitochondrial aspartyl-tRNA synthetase, yeastyeast

Gene MSD1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSD1YPL104W YLR407WQ06070 228 aa4.11□□□□□ -1.75
MSD1YPL104W MRD1Q06106 887 aaKnown RBP4.11□□□□□ -1.75
MSD1YPL104W TY1A-BRQ12217 440 aa4.11□□□□□ -1.75
MSD1YPL104W TY1A-NL2Q12470 440 aa4.11□□□□□ -1.75
MSD1YPL104W TY1A-GR2Q12485 440 aa4.11□□□□□ -1.75
MSD1YPL104W TOP1P04786 769 aa4.11□□□□□ -1.75
MSD1YPL104W CHO2P05374 869 aaKnown RBP4.11□□□□□ -1.75
MSD1YPL104W PFK2P16862 959 aaKnown RBP RIP-Chip data4.11□□□□□ -1.75not detected
MSD1YPL104W KNS1P32350 737 aaPredicted RBP4.11□□□□□ -1.75
MSD1YPL104W RPN12P32496 274 aa4.11□□□□□ -1.75
MSD1YPL104W PEP7P32609 515 aa4.11□□□□□ -1.75
MSD1YPL104W RFC5P38251 354 aa4.11□□□□□ -1.75
MSD1YPL104W GSM1P42950 618 aa4.11□□□□□ -1.75
MSD1YPL104W YFL034WP43564 1073 aa4.11□□□□□ -1.75
MSD1YPL104W EPL1P43572 832 aa4.11□□□□□ -1.75
MSD1YPL104W KIN4Q01919 800 aa4.11□□□□□ -1.75
MSD1YPL104W TRS120Q04183 1289 aa4.11□□□□□ -1.75
MSD1YPL104W FLO11P08640 1367 aa4.1□□□□□ -1.75
MSD1YPL104W ICL1P28240 557 aaPredicted RBP4.1□□□□□ -1.75
MSD1YPL104W ANP1P32629 500 aa4.1□□□□□ -1.75
MSD1YPL104W YKU70P32807 602 aa4.1□□□□□ -1.75
MSD1YPL104W PAC1P39946 494 aaKnown RBP4.1□□□□□ -1.75
MSD1YPL104W ULI1P43604 169 aa4.1□□□□□ -1.75
MSD1YPL104W VPS16Q03308 798 aa4.1□□□□□ -1.75
MSD1YPL104W TFC6Q06339 672 aa4.1□□□□□ -1.75
MSD1YPL104W HDA3Q06623 655 aa4.1□□□□□ -1.75
MSD1YPL104W ACK1Q07622 623 aaPredicted RBP4.1□□□□□ -1.75
MSD1YPL104W GAS5Q08193 484 aa4.1□□□□□ -1.75
MSD1YPL104W ETT1Q08421 412 aaKnown RBP4.1□□□□□ -1.75
MSD1YPL104W YPL260WQ08977 551 aa4.1□□□□□ -1.75
MSD1YPL104W APC11Q12157 165 aa4.1□□□□□ -1.75
MSD1YPL104W RRG1Q12167 365 aaPredicted RBP4.1□□□□□ -1.75
MSD1YPL104W RAD61Q99359 647 aa4.1□□□□□ -1.75
MSD1YPL104W PHO4P07270 312 aaKnown RBP4.09□□□□□ -1.75
MSD1YPL104W CIT2P08679 460 aa4.09□□□□□ -1.75
MSD1YPL104W FRS2P15625 503 aaKnown RBP4.09□□□□□ -1.75
MSD1YPL104W CBP3P21560 335 aa4.09□□□□□ -1.75
MSD1YPL104W MBR1P23493 339 aa4.09□□□□□ -1.75
MSD1YPL104W RDS1P25611 832 aa4.09□□□□□ -1.75
MSD1YPL104W RPS7AP26786 190 aaKnown RBP4.09□□□□□ -1.75
MSD1YPL104W ELM1P32801 640 aa4.09□□□□□ -1.75
MSD1YPL104W MYO3P36006 1272 aa4.09□□□□□ -1.75
MSD1YPL104W DID4P36108 232 aa4.09□□□□□ -1.75
MSD1YPL104W MAL33P38157 468 aa4.09□□□□□ -1.75
MSD1YPL104W RKM3P38222 552 aa4.09□□□□□ -1.75
MSD1YPL104W AKR1P39010 764 aa4.09□□□□□ -1.75
MSD1YPL104W CCT5P40413 562 aaKnown RBP4.09□□□□□ -1.75
MSD1YPL104W MSH4P40965 878 aaPredicted RBP4.09□□□□□ -1.75
MSD1YPL104W SPR3P41901 512 aa4.09□□□□□ -1.75
MSD1YPL104W KRE33P53914 1056 aaKnown RBP4.09□□□□□ -1.75
MSD1YPL104W MYO1P08964 1928 aa4.09□□□□□ -1.76
MSD1YPL104W HSP82P02829 709 aaKnown RBP4.09□□□□□ -1.76
MSD1YPL104W RPS9BP05755 195 aaKnown RBP4.09□□□□□ -1.76
MSD1YPL104W SPT2P06843 333 aaPredicted RBP4.09□□□□□ -1.76
MSD1YPL104W PGI1P12709 554 aaKnown RBP4.09□□□□□ -1.76
MSD1YPL104W HCA4P20448 770 aaKnown RBP4.09□□□□□ -1.76
MSD1YPL104W MAK31P23059 88 aa4.09□□□□□ -1.76
MSD1YPL104W RIT1P23796 513 aa4.09□□□□□ -1.76
MSD1YPL104W BMH2P34730 273 aaKnown RBP4.09□□□□□ -1.76
MSD1YPL104W RRP14P36080 434 aaKnown RBP4.09□□□□□ -1.76
MSD1YPL104W RPN10P38886 268 aaKnown RBP4.09□□□□□ -1.76
MSD1YPL104W UBP9P39967 754 aa4.09□□□□□ -1.76
MSD1YPL104W VID27P40157 782 aa4.09□□□□□ -1.76
MSD1YPL104W ALG2P43636 503 aa4.09□□□□□ -1.76
MSD1YPL104W KXD1P53158 218 aa4.09□□□□□ -1.76
MSD1YPL104W RSC1P53236 928 aa4.09□□□□□ -1.76
MSD1YPL104W PIL1P53252 339 aaKnown RBP4.09□□□□□ -1.76
MSD1YPL104W NSG2P53898 299 aa4.09□□□□□ -1.76
MSD1YPL104W HDA1P53973 706 aa4.09□□□□□ -1.76
MSD1YPL104W PIN2Q12057 282 aa4.09□□□□□ -1.76
MSD1YPL104W CYT1P07143 309 aa4.08□□□□□ -1.76
MSD1YPL104W RNR3P21672 869 aaKnown RBP4.08□□□□□ -1.76
MSD1YPL104W SWI4P25302 1093 aaKnown RBP4.08□□□□□ -1.76
MSD1YPL104W VAC17P25591 423 aa4.08□□□□□ -1.76
MSD1YPL104W MAL31P38156 614 aa4.08□□□□□ -1.76
MSD1YPL104W YBR197CP38306 217 aa4.08□□□□□ -1.76
MSD1YPL104W SHC1P39000 512 aa4.08□□□□□ -1.76
MSD1YPL104W RPS26AP39938 119 aaKnown RBP4.08□□□□□ -1.76
MSD1YPL104W RPS26BP39939 119 aaKnown RBP4.08□□□□□ -1.76
MSD1YPL104W DAK2P43550 591 aa4.08□□□□□ -1.76
MSD1YPL104W ATG36P46983 293 aa4.08□□□□□ -1.76
MSD1YPL104W PTK2P47116 818 aaKnown RBP4.08□□□□□ -1.76
MSD1YPL104W LCD1Q04377 747 aa4.08□□□□□ -1.76
MSD1YPL104W KEL3Q08979 651 aaPredicted RBP4.08□□□□□ -1.76
MSD1YPL104W YOR111WQ99210 232 aa4.08□□□□□ -1.76
MSD1YPL104W PRO3P32263 286 aaKnown RBP4.07□□□□□ -1.76
MSD1YPL104W ISC10P32645 267 aa4.07□□□□□ -1.76
MSD1YPL104W AFG2P32794 780 aa4.07□□□□□ -1.76
MSD1YPL104W VPS8P39702 1274 aa4.07□□□□□ -1.76
MSD1YPL104W CSM2P40465 213 aa4.07□□□□□ -1.76
MSD1YPL104W RTS3P53289 263 aa4.07□□□□□ -1.76
MSD1YPL104W ALG12P53730 551 aa4.07□□□□□ -1.76
MSD1YPL104W YNL035CP53962 389 aaKnown RBP4.07□□□□□ -1.76
MSD1YPL104W GDE1Q02979 1223 aa4.07□□□□□ -1.76
MSD1YPL104W MYO5Q04439 1219 aaKnown RBP4.07□□□□□ -1.76
MSD1YPL104W BUD20Q08004 166 aaPredicted RBP4.07□□□□□ -1.76
MSD1YPL104W GET3Q12154 354 aaKnown RBP4.07□□□□□ -1.76
MSD1YPL104W DDP1Q99321 188 aaKnown RBP4.07□□□□□ -1.76
MSD1YPL104W RPS6AP0CX37 236 aaKnown RBP4.07□□□□□ -1.76
MSD1YPL104W RPS6BP0CX38 236 aaPredicted RBP4.07□□□□□ -1.76
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms