RNA–Protein interactions for RNA: YOR319W

HSH49, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH49, Length 642 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH49YOR319W AIM3P38266 947 aaKnown RBP5.33□□□□□ -1.56
HSH49YOR319W NMD2P38798 1089 aaKnown RBP5.33□□□□□ -1.56
HSH49YOR319W VAC8P39968 578 aa5.33□□□□□ -1.56
HSH49YOR319W YJL049WP47048 450 aa5.33□□□□□ -1.56
HSH49YOR319W DED1P06634 604 aaKnown RBP5.32□□□□□ -1.56
HSH49YOR319W MDL2P33311 773 aa5.32□□□□□ -1.56
HSH49YOR319W YJL045WP47052 634 aa5.32□□□□□ -1.56
HSH49YOR319W MRPL22P53881 309 aa5.32□□□□□ -1.56
HSH49YOR319W SSF2Q12153 453 aaPredicted RBP5.32□□□□□ -1.56
HSH49YOR319W SAM35P14693 329 aa5.31□□□□□ -1.56
HSH49YOR319W SPC42P36094 363 aa5.31□□□□□ -1.56
HSH49YOR319W PTC5Q12511 572 aa5.31□□□□□ -1.56
HSH49YOR319W FOL2P51601 243 aaKnown RBP5.3□□□□□ -1.56
HSH49YOR319W RIM8P53179 542 aa5.3□□□□□ -1.56
HSH49YOR319W HDA2Q06629 674 aa5.3□□□□□ -1.56
HSH49YOR319W YDL177CQ12257 170 aa5.3□□□□□ -1.56
HSH49YOR319W SRO9P25567 434 aaKnown RBP5.29□□□□□ -1.56
HSH49YOR319W YSC84P32793 468 aa5.29□□□□□ -1.56
HSH49YOR319W AFG2P32794 780 aa5.29□□□□□ -1.56
HSH49YOR319W ETP1P38748 585 aaKnown RBP5.29□□□□□ -1.56
HSH49YOR319W WRS1Q12109 432 aaKnown RBP5.29□□□□□ -1.56
HSH49YOR319W KIP1P28742 1111 aa5.28□□□□□ -1.56
HSH49YOR319W SRP40P32583 406 aaPredicted RBP5.28□□□□□ -1.56
HSH49YOR319W ALG3P38179 458 aa5.28□□□□□ -1.56
HSH49YOR319W OSW7P43611 510 aa5.28□□□□□ -1.56
HSH49YOR319W UBP3Q01477 912 aaKnown RBP RIP-Chip data5.28□□□□□ -1.56not detected
HSH49YOR319W ROD1Q02805 837 aa5.28□□□□□ -1.56
HSH49YOR319W MRL1Q06815 381 aa5.28□□□□□ -1.56
HSH49YOR319W COQ4O13525 335 aa5.27□□□□□ -1.57
HSH49YOR319W AIM26P32858 118 aa5.27□□□□□ -1.57
HSH49YOR319W IOC3P43596 787 aa5.27□□□□□ -1.57
HSH49YOR319W ENT3P47160 408 aa5.27□□□□□ -1.57
HSH49YOR319W CWC24P53769 259 aa5.27□□□□□ -1.57
HSH49YOR319W SIW14P53965 281 aa5.27□□□□□ -1.57
HSH49YOR319W NBA1Q08229 501 aaKnown RBP5.27□□□□□ -1.57
HSH49YOR319W YKL091CP33324 310 aaKnown RBP5.26□□□□□ -1.57
HSH49YOR319W NSE3Q05541 303 aa5.26□□□□□ -1.57
HSH49YOR319W YPL260WQ08977 551 aa5.26□□□□□ -1.57
HSH49YOR319W STI1P15705 589 aaKnown RBP RIP-Chip data5.25□□□□□ -1.57not detected
HSH49YOR319W TOD6P34219 525 aa5.25□□□□□ -1.57
HSH49YOR319W CCZ1P38273 704 aa5.25□□□□□ -1.57
HSH49YOR319W GPB2P39717 880 aa5.25□□□□□ -1.57
HSH49YOR319W TNA1P53322 534 aa5.25□□□□□ -1.57
HSH49YOR319W RNH70P53331 553 aa5.25□□□□□ -1.57
HSH49YOR319W RAT1Q02792 1006 aaKnown RBP5.25□□□□□ -1.57
HSH49YOR319W HOS3Q02959 697 aaKnown RBP5.25□□□□□ -1.57
HSH49YOR319W RSC58Q07979 502 aa5.25□□□□□ -1.57
HSH49YOR319W SOD2P00447 233 aa5.24□□□□□ -1.57
HSH49YOR319W GCR1P07261 785 aa5.24□□□□□ -1.57
HSH49YOR319W CDC34P14682 295 aa5.24□□□□□ -1.57
HSH49YOR319W MKK2P32491 506 aa5.24□□□□□ -1.57
HSH49YOR319W SNO2P53823 222 aa5.24□□□□□ -1.57
HSH49YOR319W RPN4Q03465 531 aa5.24□□□□□ -1.57
HSH49YOR319W SPO21Q12411 609 aa5.24□□□□□ -1.57
HSH49YOR319W RPS13P05756 151 aaKnown RBP5.23□□□□□ -1.57
HSH49YOR319W SYP1P25623 870 aaKnown RBP5.23□□□□□ -1.57
HSH49YOR319W RAD27P26793 382 aa5.23□□□□□ -1.57
HSH49YOR319W PPG1P32838 368 aa5.23□□□□□ -1.57
HSH49YOR319W FPR3P38911 411 aaKnown RBP5.23□□□□□ -1.57
HSH49YOR319W RPN3P40016 523 aaKnown RBP5.23□□□□□ -1.57
HSH49YOR319W RCL1Q08096 367 aaPredicted RBP5.23□□□□□ -1.57
HSH49YOR319W RSB1Q08417 382 aa5.23□□□□□ -1.57
HSH49YOR319W YPL277CQ08989 487 aa5.23□□□□□ -1.57
HSH49YOR319W SPS1P08458 490 aa5.22□□□□□ -1.57
HSH49YOR319W PUF4P25339 888 aaKnown RBP RIP-Chip data5.22□□□□□ -1.57not detected
HSH49YOR319W RRP14P36080 434 aaKnown RBP5.22□□□□□ -1.57
HSH49YOR319W RGD1P38339 666 aa5.22□□□□□ -1.57
HSH49YOR319W HXT13P39924 564 aa5.22□□□□□ -1.57
HSH49YOR319W GNP1P48813 663 aa5.22□□□□□ -1.57
HSH49YOR319W HXT17P53631 564 aa5.22□□□□□ -1.57
HSH49YOR319W HXT15P54854 567 aa5.22□□□□□ -1.57
HSH49YOR319W GDE1Q02979 1223 aa5.22□□□□□ -1.57
HSH49YOR319W BDF2Q07442 638 aa5.22□□□□□ -1.57
HSH49YOR319W CDC53Q12018 815 aaKnown RBP5.22□□□□□ -1.57
HSH49YOR319W YOR131CQ12486 218 aa5.22□□□□□ -1.57
HSH49YOR319W CIT2P08679 460 aa5.21□□□□□ -1.58
HSH49YOR319W BAP2P38084 609 aa5.21□□□□□ -1.58
HSH49YOR319W PIK1P39104 1066 aa5.21□□□□□ -1.58
HSH49YOR319W CNN1P43618 361 aa5.21□□□□□ -1.58
HSH49YOR319W FAA4P47912 694 aaKnown RBP5.21□□□□□ -1.58
HSH49YOR319W ENV11P53246 860 aa5.21□□□□□ -1.58
HSH49YOR319W ALG12P53730 551 aa5.2□□□□□ -1.58
HSH49YOR319W GSF2Q04697 403 aaKnown RBP5.2□□□□□ -1.58
HSH49YOR319W RTT10Q08924 1013 aa5.2□□□□□ -1.58
HSH49YOR319W SNF5P18480 905 aa5.19□□□□□ -1.58
HSH49YOR319W DBP5P20449 482 aaKnown RBP5.19□□□□□ -1.58
HSH49YOR319W MLS1P30952 554 aa5.19□□□□□ -1.58
HSH49YOR319W DUT1P33317 147 aa5.19□□□□□ -1.58
HSH49YOR319W PBP2P38151 413 aaKnown RBP RIP-Chip data5.19□□□□□ -1.58not detected
HSH49YOR319W BUD6P41697 788 aa5.19□□□□□ -1.58
HSH49YOR319W YGR053CP53234 283 aa5.19□□□□□ -1.58
HSH49YOR319W NAN1Q02931 896 aaKnown RBP5.19□□□□□ -1.58
HSH49YOR319W YOR352WQ08816 343 aa5.19□□□□□ -1.58
HSH49YOR319W GRX1P25373 110 aaKnown RBP5.18□□□□□ -1.58
HSH49YOR319W TAT2P38967 592 aa5.18□□□□□ -1.58
HSH49YOR319W SEC26P41810 973 aaKnown RBP5.18□□□□□ -1.58
HSH49YOR319W TDA5Q06417 326 aaKnown RBP5.18□□□□□ -1.58
HSH49YOR319W TMA46Q12000 345 aaKnown RBP5.18□□□□□ -1.58
HSH49YOR319W YLR358CO13565 187 aa5.17□□□□□ -1.58
HSH49YOR319W YER152CP10356 443 aa5.17□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 27.2 ms