RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A RDH54P38086 958 aa5.32□□□□□ -1.56
YSF3YNL138W-A SPO74P45819 413 aa5.32□□□□□ -1.56
YSF3YNL138W-A MTR4P47047 1073 aaKnown RBP5.32□□□□□ -1.56
YSF3YNL138W-A DOT1Q04089 582 aaKnown RBP5.32□□□□□ -1.56
YSF3YNL138W-A JIP5Q06214 492 aaPredicted RBP5.32□□□□□ -1.56
YSF3YNL138W-A YLL054CQ12244 843 aa5.32□□□□□ -1.56
YSF3YNL138W-A IML1P47170 1584 aa5.31□□□□□ -1.56
YSF3YNL138W-A NAM7P30771 971 aaKnown RBP5.31□□□□□ -1.56
YSF3YNL138W-A GPT2P36148 743 aa5.31□□□□□ -1.56
YSF3YNL138W-A ARL1P38116 183 aaKnown RBP5.31□□□□□ -1.56
YSF3YNL138W-A LSB3P43603 459 aaKnown RBP5.31□□□□□ -1.56
YSF3YNL138W-A CCT8P47079 568 aaKnown RBP5.31□□□□□ -1.56
YSF3YNL138W-A YGR045CP53229 120 aa5.31□□□□□ -1.56
YSF3YNL138W-A YPL034WQ03083 165 aa5.31□□□□□ -1.56
YSF3YNL138W-A HAP1P0CE41 1502 aa5.31□□□□□ -1.56
YSF3YNL138W-A DED1P06634 604 aaKnown RBP5.3□□□□□ -1.56
YSF3YNL138W-A VMA4P22203 233 aaKnown RBP5.3□□□□□ -1.56
YSF3YNL138W-A PET112P33893 541 aa5.3□□□□□ -1.56
YSF3YNL138W-A AKR1P39010 764 aa5.3□□□□□ -1.56
YSF3YNL138W-A YNR063WP53749 607 aa5.3□□□□□ -1.56
YSF3YNL138W-A ELA1P53861 379 aaPredicted RBP5.3□□□□□ -1.56
YSF3YNL138W-A HDA2Q06629 674 aa5.3□□□□□ -1.56
YSF3YNL138W-A MRL1Q06815 381 aa5.3□□□□□ -1.56
YSF3YNL138W-A AVO1Q08236 1176 aa5.3□□□□□ -1.56
YSF3YNL138W-A SCP160P06105 1222 aaKnown RBP RIP-Chip data5.29□□□□□ -1.56not detected
YSF3YNL138W-A EST2Q06163 884 aa5.29□□□□□ -1.56
YSF3YNL138W-A ADD66P36040 267 aa5.28□□□□□ -1.56
YSF3YNL138W-A YAR028WP39548 234 aa5.28□□□□□ -1.56
YSF3YNL138W-A GNP1P48813 663 aa5.28□□□□□ -1.56
YSF3YNL138W-A ROD1Q02805 837 aa5.28□□□□□ -1.56
YSF3YNL138W-A MSH4P40965 878 aaPredicted RBP5.27□□□□□ -1.57
YSF3YNL138W-A SVF1Q05515 481 aa5.27□□□□□ -1.57
YSF3YNL138W-A GIC2Q06648 383 aa5.27□□□□□ -1.57
YSF3YNL138W-A DUT1P33317 147 aa5.26□□□□□ -1.57
YSF3YNL138W-A PGM1P33401 570 aaKnown RBP5.26□□□□□ -1.57
YSF3YNL138W-A HXT13P39924 564 aa5.26□□□□□ -1.57
YSF3YNL138W-A MAD1P40957 749 aa5.26□□□□□ -1.57
YSF3YNL138W-A NOP7P53261 605 aaKnown RBP5.26□□□□□ -1.57
YSF3YNL138W-A HXT17P53631 564 aa5.26□□□□□ -1.57
YSF3YNL138W-A HXT15P54854 567 aa5.26□□□□□ -1.57
YSF3YNL138W-A PUF3Q07807 879 aaKnown RBP RIP-Chip data5.26□□□□□ -1.57not detected
YSF3YNL138W-A RTT10Q08924 1013 aa5.26□□□□□ -1.57
YSF3YNL138W-A TAF13P11747 167 aa5.25□□□□□ -1.57
YSF3YNL138W-A NFS1P25374 497 aa5.25□□□□□ -1.57
YSF3YNL138W-A COQ2P32378 372 aa5.25□□□□□ -1.57
YSF3YNL138W-A AFG2P32794 780 aa5.25□□□□□ -1.57
YSF3YNL138W-A MNR2P35724 969 aa5.25□□□□□ -1.57
YSF3YNL138W-A ATG14P38270 344 aa5.25□□□□□ -1.57
YSF3YNL138W-A NMD3P38861 518 aaKnown RBP5.25□□□□□ -1.57
YSF3YNL138W-A SIW14P53965 281 aa5.25□□□□□ -1.57
YSF3YNL138W-A VPS16Q03308 798 aa5.25□□□□□ -1.57
YSF3YNL138W-A CDC34P14682 295 aa5.24□□□□□ -1.57
YSF3YNL138W-A SAF1P38352 637 aa5.24□□□□□ -1.57
YSF3YNL138W-A RAT1Q02792 1006 aaKnown RBP5.24□□□□□ -1.57
YSF3YNL138W-A EAR1Q03212 550 aa5.24□□□□□ -1.57
YSF3YNL138W-A LAP2Q10740 671 aa5.24□□□□□ -1.57
YSF3YNL138W-A PIN2Q12057 282 aa5.24□□□□□ -1.57
YSF3YNL138W-A RPS4AP0CX35 261 aaKnown RBP5.23□□□□□ -1.57
YSF3YNL138W-A RPS4BP0CX36 261 aaKnown RBP5.23□□□□□ -1.57
YSF3YNL138W-A RET1P22276 1149 aaKnown RBP5.23□□□□□ -1.57
YSF3YNL138W-A RAD27P26793 382 aa5.23□□□□□ -1.57
YSF3YNL138W-A MKK2P32491 506 aa5.23□□□□□ -1.57
YSF3YNL138W-A SMY2P32909 740 aaKnown RBP5.23□□□□□ -1.57
YSF3YNL138W-A WHI3P34761 661 aaKnown RBP5.23□□□□□ -1.57
YSF3YNL138W-A RKM2Q03942 479 aa5.23□□□□□ -1.57
YSF3YNL138W-A RSA3Q05942 220 aaKnown RBP5.23□□□□□ -1.57
YSF3YNL138W-A MAG2Q06436 670 aaKnown RBP5.23□□□□□ -1.57
YSF3YNL138W-A YLR122CQ12312 125 aa5.23□□□□□ -1.57
YSF3YNL138W-A VMR1P38735 1592 aa5.23□□□□□ -1.57
YSF3YNL138W-A CLN2P20438 545 aa5.22□□□□□ -1.57
YSF3YNL138W-A NAP1P25293 417 aaKnown RBP5.22□□□□□ -1.57
YSF3YNL138W-A RER2P35196 286 aa5.22□□□□□ -1.57
YSF3YNL138W-A NNK1P36003 928 aa5.22□□□□□ -1.57
YSF3YNL138W-A ALG3P38179 458 aa5.22□□□□□ -1.57
YSF3YNL138W-A FAA4P47912 694 aaKnown RBP5.22□□□□□ -1.57
YSF3YNL138W-A ALT1P52893 592 aa5.22□□□□□ -1.57
YSF3YNL138W-A CWC24P53769 259 aa5.22□□□□□ -1.57
YSF3YNL138W-A ALD6P54115 500 aaKnown RBP5.22□□□□□ -1.57
YSF3YNL138W-A EEB1Q02891 456 aa5.22□□□□□ -1.57
YSF3YNL138W-A YLR257WQ06146 321 aaKnown RBP5.22□□□□□ -1.57
YSF3YNL138W-A KAE1P36132 386 aa5.21□□□□□ -1.58
YSF3YNL138W-A HSE1P38753 452 aa5.21□□□□□ -1.58
YSF3YNL138W-A QNS1P38795 714 aaKnown RBP5.21□□□□□ -1.58
YSF3YNL138W-A VAC8P39968 578 aa5.21□□□□□ -1.58
YSF3YNL138W-A GDE1Q02979 1223 aa5.21□□□□□ -1.58
YSF3YNL138W-A TMA46Q12000 345 aaKnown RBP5.21□□□□□ -1.58
YSF3YNL138W-A PTC5Q12511 572 aa5.21□□□□□ -1.58
YSF3YNL138W-A CHS2P14180 963 aa5.2□□□□□ -1.58
YSF3YNL138W-A SYP1P25623 870 aaKnown RBP5.2□□□□□ -1.58
YSF3YNL138W-A MMM1P41800 426 aa5.2□□□□□ -1.58
YSF3YNL138W-A ENT3P47160 408 aa5.2□□□□□ -1.58
YSF3YNL138W-A YGR130CP53278 816 aa5.2□□□□□ -1.58
YSF3YNL138W-A NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.2□□□□□ -1.58not detected
YSF3YNL138W-A TPP1Q03796 238 aa5.2□□□□□ -1.58
YSF3YNL138W-A TRP3P00937 484 aa5.19□□□□□ -1.58
YSF3YNL138W-A VPS53P47061 822 aa5.19□□□□□ -1.58
YSF3YNL138W-A PUS7Q08647 676 aaKnown RBP5.19□□□□□ -1.58
YSF3YNL138W-A BCK1Q01389 1478 aa5.19□□□□□ -1.58
YSF3YNL138W-A TRP2P00899 507 aaKnown RBP5.18□□□□□ -1.58
YSF3YNL138W-A MSB1P21339 1137 aaKnown RBP5.18□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms