RNA–Protein interactions for RNA: YML041C

VPS71, Transcript of Nucleosome-binding component of the SWR1 complex, yeastyeast

Gene VPS71, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS71YML041C GNT1Q12096 491 aa5.86□□□□□ -1.47
VPS71YML041C HBN1Q96VH4 193 aa5.86□□□□□ -1.47
VPS71YML041C NOP14Q99207 810 aaKnown RBP5.86□□□□□ -1.47
VPS71YML041C PRP9P19736 530 aaKnown RBP5.85□□□□□ -1.47
VPS71YML041C MLS1P30952 554 aa5.85□□□□□ -1.47
VPS71YML041C MDJ1P35191 511 aa5.85□□□□□ -1.47
VPS71YML041C PNT1P38969 423 aa5.85□□□□□ -1.47
VPS71YML041C YAR028WP39548 234 aa5.85□□□□□ -1.47
VPS71YML041C ALR2P43553 858 aa5.85□□□□□ -1.47
VPS71YML041C GUS1P46655 708 aaKnown RBP RIP-Chip data5.85□□□□□ -1.47not detected
VPS71YML041C NCE103P53615 221 aa5.85□□□□□ -1.47
VPS71YML041C ERS1P17261 260 aa5.84□□□□□ -1.47
VPS71YML041C GDH3P39708 457 aa5.84□□□□□ -1.47
VPS71YML041C HUL4P40985 892 aa5.84□□□□□ -1.47
VPS71YML041C ATG36P46983 293 aa5.84□□□□□ -1.47
VPS71YML041C NTG2Q08214 380 aa5.84□□□□□ -1.47
VPS71YML041C PTC5Q12511 572 aa5.84□□□□□ -1.47
VPS71YML041C TSR4P25040 408 aa5.83□□□□□ -1.48
VPS71YML041C PGM2P37012 569 aaKnown RBP5.83□□□□□ -1.48
VPS71YML041C QNS1P38795 714 aaKnown RBP5.83□□□□□ -1.48
VPS71YML041C SNF7P39929 240 aaKnown RBP5.83□□□□□ -1.48
VPS71YML041C ICP55P40051 511 aa5.83□□□□□ -1.48
VPS71YML041C VPS53P47061 822 aa5.83□□□□□ -1.48
VPS71YML041C YNR063WP53749 607 aa5.83□□□□□ -1.48
VPS71YML041C UGO1Q03327 502 aa5.83□□□□□ -1.48
VPS71YML041C ALG6Q12001 544 aaKnown RBP5.83□□□□□ -1.48
VPS71YML041C YLL054CQ12244 843 aa5.83□□□□□ -1.48
VPS71YML041C YGR161W-CQ3E744 92 aa5.83□□□□□ -1.48
VPS71YML041C YER152CP10356 443 aa5.82□□□□□ -1.48
VPS71YML041C TOP3P13099 656 aa5.82□□□□□ -1.48
VPS71YML041C RPL8AP17076 256 aaKnown RBP5.82□□□□□ -1.48
VPS71YML041C DBP2P24783 546 aaKnown RBP5.82□□□□□ -1.48
VPS71YML041C MCM7P38132 845 aa5.82□□□□□ -1.48
VPS71YML041C SIT1P39980 628 aa5.82□□□□□ -1.48
VPS71YML041C MSH4P40965 878 aaPredicted RBP5.82□□□□□ -1.48
VPS71YML041C YFL066CP43538 392 aa5.82□□□□□ -1.48
VPS71YML041C ZDS1P50111 915 aaKnown RBP5.82□□□□□ -1.48
VPS71YML041C BUL2Q03758 920 aaKnown RBP5.82□□□□□ -1.48
VPS71YML041C MTC5Q03897 1148 aa5.82□□□□□ -1.48
VPS71YML041C YPL260WQ08977 551 aa5.82□□□□□ -1.48
VPS71YML041C AI1P03875 834 aa5.81□□□□□ -1.48
VPS71YML041C SAC7P17121 654 aa5.81□□□□□ -1.48
VPS71YML041C TOM20P35180 183 aa5.81□□□□□ -1.48
VPS71YML041C MAE1P36013 669 aaKnown RBP5.81□□□□□ -1.48
VPS71YML041C ALG14P38242 237 aa5.81□□□□□ -1.48
VPS71YML041C YNR029CP53729 429 aaKnown RBP5.81□□□□□ -1.48
VPS71YML041C RSA3Q05942 220 aaKnown RBP5.81□□□□□ -1.48
VPS71YML041C LAP2Q10740 671 aa5.81□□□□□ -1.48
VPS71YML041C RET1P22276 1149 aaKnown RBP5.8□□□□□ -1.48
VPS71YML041C KIP1P28742 1111 aa5.8□□□□□ -1.48
VPS71YML041C DSE4P53753 1117 aa5.8□□□□□ -1.48
VPS71YML041C THI72Q08579 599 aa5.8□□□□□ -1.48
VPS71YML041C MDM12Q92328 271 aa5.8□□□□□ -1.48
VPS71YML041C NHA1Q99271 985 aa5.8□□□□□ -1.48
VPS71YML041C RPL11AP0C0W9 174 aaKnown RBP5.79□□□□□ -1.48
VPS71YML041C SSB1P11484 613 aaKnown RBP5.79□□□□□ -1.48
VPS71YML041C SRM1P21827 482 aa5.79□□□□□ -1.48
VPS71YML041C AFR1P33304 620 aa5.79□□□□□ -1.48
VPS71YML041C PEX6P33760 1030 aa5.79□□□□□ -1.48
VPS71YML041C YKL151CP36059 337 aa5.79□□□□□ -1.48
VPS71YML041C SSB2P40150 613 aaKnown RBP5.79□□□□□ -1.48
VPS71YML041C HSV2P50079 448 aaPredicted RBP5.79□□□□□ -1.48
VPS71YML041C ELA1P53861 379 aaPredicted RBP5.79□□□□□ -1.48
VPS71YML041C NSG2P53898 299 aa5.79□□□□□ -1.48
VPS71YML041C YDL124WQ07551 312 aaKnown RBP5.79□□□□□ -1.48
VPS71YML041C AVO1Q08236 1176 aa5.79□□□□□ -1.48
VPS71YML041C PHM7Q12252 991 aa5.79□□□□□ -1.48
VPS71YML041C RPL11BQ3E757 174 aaPredicted RBP5.79□□□□□ -1.48
VPS71YML041C PET10P36139 283 aa5.78□□□□□ -1.48
VPS71YML041C CCC2P38995 1004 aa5.78□□□□□ -1.48
VPS71YML041C RPN3P40016 523 aaKnown RBP5.78□□□□□ -1.48
VPS71YML041C SBE2P42223 864 aaKnown RBP5.78□□□□□ -1.48
VPS71YML041C UBP6P43593 499 aaKnown RBP5.78□□□□□ -1.48
VPS71YML041C KIP3P53086 805 aaKnown RBP5.78□□□□□ -1.48
VPS71YML041C SPP382Q06411 708 aaPredicted RBP5.78□□□□□ -1.48
VPS71YML041C YOR223WQ12015 292 aa5.78□□□□□ -1.48
VPS71YML041C CDC12P32468 407 aaKnown RBP5.77□□□□□ -1.49
VPS71YML041C HSE1P38753 452 aa5.77□□□□□ -1.49
VPS71YML041C CRP1P38845 465 aaKnown RBP5.77□□□□□ -1.49
VPS71YML041C DOT1Q04089 582 aaKnown RBP5.77□□□□□ -1.49
VPS71YML041C YMR074CQ04773 145 aa5.77□□□□□ -1.49
VPS71YML041C YLR257WQ06146 321 aaKnown RBP5.77□□□□□ -1.49
VPS71YML041C GIC2Q06648 383 aa5.77□□□□□ -1.49
VPS71YML041C YLR001CQ07895 862 aa5.77□□□□□ -1.49
VPS71YML041C TY1A-NL1Q12391 440 aaKnown RBP5.77□□□□□ -1.49
VPS71YML041C SPO21Q12411 609 aa5.77□□□□□ -1.49
VPS71YML041C MSD1P15179 658 aaKnown RBP5.76□□□□□ -1.49
VPS71YML041C MEF1P25039 761 aa5.76□□□□□ -1.49
VPS71YML041C SLA2P33338 968 aa5.76□□□□□ -1.49
VPS71YML041C NNK1P36003 928 aa5.76□□□□□ -1.49
VPS71YML041C YBR284WP38150 797 aa5.76□□□□□ -1.49
VPS71YML041C ATG14P38270 344 aa5.76□□□□□ -1.49
VPS71YML041C MXR1P40029 184 aa5.76□□□□□ -1.49
VPS71YML041C YDR306CQ06640 478 aa5.76□□□□□ -1.49
VPS71YML041C PUS1Q12211 544 aaKnown RBP5.76□□□□□ -1.49
VPS71YML041C ADR1P07248 1323 aa5.75□□□□□ -1.49
VPS71YML041C SNF5P18480 905 aa5.75□□□□□ -1.49
VPS71YML041C CDC11P32458 415 aa5.75□□□□□ -1.49
VPS71YML041C SMY2P32909 740 aaKnown RBP5.75□□□□□ -1.49
VPS71YML041C DOM34P33309 386 aa5.75□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 61.1 ms