RNA–Protein interactions for RNA: YKR056W

TRM2, Transcript of tRNA methyltransferase, yeastyeast

Gene TRM2, Length 1,920 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM2YKR056W RPA135P22138 1203 aaKnown RBP3.33□□□□□ -1.88
TRM2YKR056W YCR015CP25616 317 aa3.33□□□□□ -1.88
TRM2YKR056W VPS24P36095 224 aaKnown RBP3.33□□□□□ -1.88
TRM2YKR056W RDH54P38086 958 aa3.33□□□□□ -1.88
TRM2YKR056W NOG1Q02892 647 aaKnown RBP3.33□□□□□ -1.88
TRM2YKR056W YOR296WQ08748 1289 aa3.33□□□□□ -1.88
TRM2YKR056W OSH2Q12451 1283 aa3.33□□□□□ -1.88
TRM2YKR056W KAR1P11927 433 aa3.32□□□□□ -1.88
TRM2YKR056W SEC23P15303 768 aaKnown RBP3.32□□□□□ -1.88
TRM2YKR056W GAL11P19659 1081 aa3.32□□□□□ -1.88
TRM2YKR056W PRP5P21372 849 aaPredicted RBP3.32□□□□□ -1.88
TRM2YKR056W PWP2P25635 923 aaKnown RBP3.32□□□□□ -1.88
TRM2YKR056W RIM11P38615 370 aa3.32□□□□□ -1.88
TRM2YKR056W APM2P38700 605 aa3.32□□□□□ -1.88
TRM2YKR056W PEX28P38848 579 aa3.32□□□□□ -1.88
TRM2YKR056W AIM46P38885 310 aa3.32□□□□□ -1.88
TRM2YKR056W NAB3P38996 802 aaKnown RBP RIP-Chip data3.32□□□□□ -1.88not detected
TRM2YKR056W YIL165CP40446 119 aa3.32□□□□□ -1.88
TRM2YKR056W TFB2Q02939 513 aa3.32□□□□□ -1.88
TRM2YKR056W CYC7P00045 113 aa3.32□□□□□ -1.88
TRM2YKR056W NPR1P22211 790 aa3.32□□□□□ -1.88
TRM2YKR056W TRX2P22803 104 aaKnown RBP3.32□□□□□ -1.88
TRM2YKR056W MEF1P25039 761 aa3.32□□□□□ -1.88
TRM2YKR056W SBA1P28707 216 aaKnown RBP3.32□□□□□ -1.88
TRM2YKR056W NCL1P38205 684 aaKnown RBP3.32□□□□□ -1.88
TRM2YKR056W HSV2P50079 448 aaPredicted RBP3.32□□□□□ -1.88
TRM2YKR056W YGR237CP50089 785 aa3.32□□□□□ -1.88
TRM2YKR056W UGO1Q03327 502 aa3.32□□□□□ -1.88
TRM2YKR056W YLR001CQ07895 862 aa3.32□□□□□ -1.88
TRM2YKR056W YPL066WQ12194 479 aa3.32□□□□□ -1.88
TRM2YKR056W CMR1Q12510 522 aaKnown RBP3.32□□□□□ -1.88
TRM2YKR056W TOP3P13099 656 aa3.31□□□□□ -1.88
TRM2YKR056W VMA4P22203 233 aaKnown RBP3.31□□□□□ -1.88
TRM2YKR056W MSH3P25336 1018 aa3.31□□□□□ -1.88
TRM2YKR056W ARE1P25628 610 aa3.31□□□□□ -1.88
TRM2YKR056W LYP1P32487 611 aa3.31□□□□□ -1.88
TRM2YKR056W MRP8P35719 219 aa3.31□□□□□ -1.88
TRM2YKR056W GDH3P39708 457 aa3.31□□□□□ -1.88
TRM2YKR056W IES5P40060 125 aa3.31□□□□□ -1.88
TRM2YKR056W ERP6P53198 216 aa3.31□□□□□ -1.88
TRM2YKR056W YNL193WP53870 558 aa3.31□□□□□ -1.88
TRM2YKR056W SND1Q04007 877 aa3.31□□□□□ -1.88
TRM2YKR056W SLX4Q12098 748 aa3.31□□□□□ -1.88
TRM2YKR056W THS1P04801 734 aaKnown RBP3.31□□□□□ -1.88
TRM2YKR056W MOT2P34909 587 aaKnown RBP3.31□□□□□ -1.88
TRM2YKR056W PBY1P38254 753 aa3.31□□□□□ -1.88
TRM2YKR056W MBP1P39678 833 aa3.31□□□□□ -1.88
TRM2YKR056W SEC26P41810 973 aaKnown RBP3.31□□□□□ -1.88
TRM2YKR056W SIW14P53965 281 aa3.31□□□□□ -1.88
TRM2YKR056W IDI1P15496 288 aa3.3□□□□□ -1.88
TRM2YKR056W HBS1P32769 611 aaKnown RBP3.3□□□□□ -1.88
TRM2YKR056W PEX6P33760 1030 aa3.3□□□□□ -1.88
TRM2YKR056W AKR1P39010 764 aa3.3□□□□□ -1.88
TRM2YKR056W HUL4P40985 892 aa3.3□□□□□ -1.88
TRM2YKR056W ALR2P43553 858 aa3.3□□□□□ -1.88
TRM2YKR056W COG6P53959 839 aa3.3□□□□□ -1.88
TRM2YKR056W PEX13P80667 386 aa3.3□□□□□ -1.88
TRM2YKR056W ROD1Q02805 837 aa3.3□□□□□ -1.88
TRM2YKR056W TIF35Q04067 274 aaKnown RBP3.3□□□□□ -1.88
TRM2YKR056W THI73Q07904 523 aa3.3□□□□□ -1.88
TRM2YKR056W MDM12Q92328 271 aa3.3□□□□□ -1.88
TRM2YKR056W SPO74P45819 413 aa3.29□□□□□ -1.88
TRM2YKR056W RSM26P47141 266 aa3.29□□□□□ -1.88
TRM2YKR056W NPL3Q01560 414 aaKnown RBP RIP-Chip data3.29□□□□□ -1.88not detected
TRM2YKR056W PMT7Q06644 662 aa3.29□□□□□ -1.88
TRM2YKR056W HBN1Q96VH4 193 aa3.29□□□□□ -1.88
TRM2YKR056W NAM7P30771 971 aaKnown RBP3.29□□□□□ -1.88
TRM2YKR056W SFP1P32432 683 aa3.29□□□□□ -1.88
TRM2YKR056W EUG1P32474 517 aa3.29□□□□□ -1.88
TRM2YKR056W HIR1P32479 840 aa3.29□□□□□ -1.88
TRM2YKR056W YBR071WP38243 211 aa3.29□□□□□ -1.88
TRM2YKR056W SNF7P39929 240 aaKnown RBP3.29□□□□□ -1.88
TRM2YKR056W NIT1P40447 199 aa3.29□□□□□ -1.88
TRM2YKR056W GPP1P41277 250 aaKnown RBP3.29□□□□□ -1.88
TRM2YKR056W HLJ1P48353 224 aa3.29□□□□□ -1.88
TRM2YKR056W YGR021WP53212 290 aa3.29□□□□□ -1.88
TRM2YKR056W SPO20Q04359 397 aa3.29□□□□□ -1.88
TRM2YKR056W PUF3Q07807 879 aaKnown RBP RIP-Chip data3.29□□□□□ -1.88not detected
TRM2YKR056W HVG1P0CE11 249 aa3.28□□□□□ -1.88
TRM2YKR056W TAF13P11747 167 aa3.28□□□□□ -1.88
TRM2YKR056W INO1P11986 533 aa3.28□□□□□ -1.88
TRM2YKR056W SEG2P34250 1132 aa3.28□□□□□ -1.88
TRM2YKR056W SQT1P35184 431 aa3.28□□□□□ -1.88
TRM2YKR056W EXO5P38289 585 aa3.28□□□□□ -1.88
TRM2YKR056W CCC2P38995 1004 aa3.28□□□□□ -1.88
TRM2YKR056W MDG1P53885 366 aa3.28□□□□□ -1.88
TRM2YKR056W YNL034WP53963 612 aa3.28□□□□□ -1.88
TRM2YKR056W YNL018CP53976 612 aa3.28□□□□□ -1.88
TRM2YKR056W UME1Q03010 460 aa3.28□□□□□ -1.88
TRM2YKR056W BRE1Q07457 700 aaKnown RBP3.28□□□□□ -1.88
TRM2YKR056W TFA2P36145 328 aa3.27□□□□□ -1.89
TRM2YKR056W ECM2P38241 364 aaKnown RBP3.27□□□□□ -1.89
TRM2YKR056W YER156CP40093 338 aaKnown RBP3.27□□□□□ -1.89
TRM2YKR056W SIP5P40210 489 aaKnown RBP3.27□□□□□ -1.89
TRM2YKR056W YGL176CP46945 554 aa3.27□□□□□ -1.89
TRM2YKR056W MTR4P47047 1073 aaKnown RBP3.27□□□□□ -1.89
TRM2YKR056W PMT3P47190 753 aa3.27□□□□□ -1.89
TRM2YKR056W RAT1Q02792 1006 aaKnown RBP3.27□□□□□ -1.89
TRM2YKR056W CEF1Q03654 590 aaPredicted RBP3.27□□□□□ -1.89
TRM2YKR056W ATG16Q03818 150 aa3.27□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 28.3 ms