RNA–Protein interactions for RNA: YKR043C

SHB17, Transcript of Sedoheptulose bisphosphatase involved in riboneogenesis, yeast

Gene SHB17, Length 816 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHB17	YKR043C	UBP15	P50101	1230 aa		11.57	□□□□□ -0.56
SHB17	YKR043C	ECM30	Q06673	1274 aa		11.57	□□□□□ -0.56
SHB17	YKR043C	DCS2	Q12123	353 aa		11.57	□□□□□ -0.56
SHB17	YKR043C	THR4	P16120	514 aa	Known RBP	11.56	□□□□□ -0.56
SHB17	YKR043C	CLB5	P30283	435 aa		11.56	□□□□□ -0.56
SHB17	YKR043C	UBP11	P36026	717 aa		11.56	□□□□□ -0.56
SHB17	YKR043C	FLR1	P38124	548 aa		11.56	□□□□□ -0.56
SHB17	YKR043C	RFC5	P38251	354 aa		11.56	□□□□□ -0.56
SHB17	YKR043C	GAA1	P39012	614 aa		11.56	□□□□□ -0.56
SHB17	YKR043C	CSM3	Q04659	317 aa		11.56	□□□□□ -0.56
SHB17	YKR043C	GPT2	P36148	743 aa		11.55	□□□□□ -0.56
SHB17	YKR043C	RPS7B	P48164	190 aa	Known RBP	11.55	□□□□□ -0.56
SHB17	YKR043C	MAS2	P11914	482 aa		11.54	□□□□□ -0.56
SHB17	YKR043C	KTR2	P33550	425 aa		11.54	□□□□□ -0.56
SHB17	YKR043C	HUL5	P53119	910 aa		11.54	□□□□□ -0.56
SHB17	YKR043C	DAK1	P54838	584 aa	Known RBP	11.54	□□□□□ -0.56
SHB17	YKR043C	MFM1	Q02783	413 aa		11.54	□□□□□ -0.56
SHB17	YKR043C	TRS120	Q04183	1289 aa		11.54	□□□□□ -0.56
SHB17	YKR043C	VPS13	Q07878	3144 aa		11.53	□□□□□ -0.56
SHB17	YKR043C	ILV1	P00927	576 aa	Known RBP	11.53	□□□□□ -0.56
SHB17	YKR043C	ESS1	P22696	170 aa		11.53	□□□□□ -0.56
SHB17	YKR043C	PRX1	P34227	261 aa	Known RBP	11.53	□□□□□ -0.56
SHB17	YKR043C	ORC6	P38826	435 aa		11.53	□□□□□ -0.56
SHB17	YKR043C	STT3	P39007	718 aa	Known RBP	11.53	□□□□□ -0.56
SHB17	YKR043C	HMF1	P40037	129 aa	Known RBP	11.53	□□□□□ -0.56
SHB17	YKR043C	ATG32	P40458	529 aa		11.53	□□□□□ -0.56
SHB17	YKR043C	PHM6	Q05637	104 aa		11.53	□□□□□ -0.56
SHB17	YKR043C	SLK19	Q08581	821 aa	Known RBP	11.53	□□□□□ -0.56
SHB17	YKR043C	TIP41	Q12199	356 aa		11.53	□□□□□ -0.56
SHB17	YKR043C	PGK1	P00560	416 aa	Known RBP	11.52	□□□□□ -0.57
SHB17	YKR043C	TVP38	P36164	337 aa		11.52	□□□□□ -0.57
SHB17	YKR043C	GPD2	P41911	440 aa	Known RBP	11.52	□□□□□ -0.57
SHB17	YKR043C	PIL1	P53252	339 aa	Known RBP	11.52	□□□□□ -0.57
SHB17	YKR043C	YPL034W	Q03083	165 aa		11.52	□□□□□ -0.57
SHB17	YKR043C	YLL058W	Q12198	575 aa		11.52	□□□□□ -0.57
SHB17	YKR043C	RTP1	Q12751	981 aa		11.52	□□□□□ -0.57
SHB17	YKR043C	FKS1	P38631	1876 aa	Known RBP	11.52	□□□□□ -0.57
SHB17	YKR043C	PGI1	P12709	554 aa	Known RBP	11.51	□□□□□ -0.57
SHB17	YKR043C	PCT1	P13259	424 aa		11.51	□□□□□ -0.57
SHB17	YKR043C	GSY1	P23337	708 aa		11.51	□□□□□ -0.57
SHB17	YKR043C	MAL33	P38157	468 aa		11.51	□□□□□ -0.57
SHB17	YKR043C	FIR1	P40020	876 aa		11.51	□□□□□ -0.57
SHB17	YKR043C	CNM67	P53865	581 aa	Known RBP	11.51	□□□□□ -0.57
SHB17	YKR043C	CRD1	Q07560	283 aa		11.51	□□□□□ -0.57
SHB17	YKR043C	YOR296W	Q08748	1289 aa		11.51	□□□□□ -0.57
SHB17	YKR043C	NBL1	Q3E7Y6	73 aa		11.51	□□□□□ -0.57
SHB17	YKR043C	ALG1	P16661	449 aa		11.5	□□□□□ -0.57
SHB17	YKR043C	PGM1	P33401	570 aa	Known RBP	11.5	□□□□□ -0.57
SHB17	YKR043C	BRE2	P43132	505 aa		11.5	□□□□□ -0.57
SHB17	YKR043C	YGR153W	P48238	217 aa		11.5	□□□□□ -0.57
SHB17	YKR043C	ZPR1	P53303	486 aa	Known RBP	11.5	□□□□□ -0.57
SHB17	YKR043C	PTC5	Q12511	572 aa		11.5	□□□□□ -0.57
SHB17	YKR043C	BIK1	P11709	440 aa		11.49	□□□□□ -0.57
SHB17	YKR043C	SNA3	P14359	133 aa		11.49	□□□□□ -0.57
SHB17	YKR043C	KIN82	P25341	720 aa		11.49	□□□□□ -0.57
SHB17	YKR043C	SUV3	P32580	737 aa		11.49	□□□□□ -0.57
SHB17	YKR043C	PEX14	P53112	341 aa		11.49	□□□□□ -0.57
SHB17	YKR043C	FAR11	P53917	953 aa		11.49	□□□□□ -0.57
SHB17	YKR043C	FMP30	Q02883	468 aa		11.49	□□□□□ -0.57
SHB17	YKR043C	YEL025C	P39991	1188 aa		11.48	□□□□□ -0.57
SHB17	YKR043C	YFL040W	P43562	540 aa		11.48	□□□□□ -0.57
SHB17	YKR043C	DIP5	P53388	608 aa		11.48	□□□□□ -0.57
SHB17	YKR043C	MSC2	Q03455	724 aa		11.48	□□□□□ -0.57
SHB17	YKR043C	EIS1	Q05050	843 aa	Known RBP	11.48	□□□□□ -0.57
SHB17	YKR043C	SVF1	Q05515	481 aa		11.48	□□□□□ -0.57
SHB17	YKR043C	GPI13	Q07830	1017 aa		11.48	□□□□□ -0.57
SHB17	YKR043C	ATG11	Q12527	1178 aa		11.48	□□□□□ -0.57
SHB17	YKR043C	SUP45	P12385	437 aa	Known RBP	11.47	□□□□□ -0.57
SHB17	YKR043C	CLA4	P48562	842 aa		11.47	□□□□□ -0.57
SHB17	YKR043C	VPS72	Q03388	795 aa		11.47	□□□□□ -0.57
SHB17	YKR043C	YDR524C-B	Q3E6R4	66 aa		11.47	□□□□□ -0.57
SHB17	YKR043C	TUF1	P02992	437 aa	Known RBP	11.46	□□□□□ -0.57
SHB17	YKR043C	CLN3	P13365	580 aa		11.46	□□□□□ -0.57
SHB17	YKR043C	MIP1	P15801	1254 aa		11.46	□□□□□ -0.57
SHB17	YKR043C	RDS1	P25611	832 aa		11.46	□□□□□ -0.57
SHB17	YKR043C	URA1	P28272	314 aa	Predicted RBP	11.46	□□□□□ -0.57
SHB17	YKR043C	WHI3	P34761	661 aa	Known RBP	11.46	□□□□□ -0.57
SHB17	YKR043C	SDA1	P53313	767 aa	Known RBP	11.46	□□□□□ -0.57
SHB17	YKR043C	RTC4	P53850	401 aa		11.46	□□□□□ -0.57
SHB17	YKR043C	YML020W	Q03722	664 aa		11.46	□□□□□ -0.57
SHB17	YKR043C	HRQ1	Q05549	1077 aa		11.46	□□□□□ -0.57
SHB17	YKR043C	HEM1	P09950	548 aa	Predicted RBP	11.45	□□□□□ -0.58
SHB17	YKR043C	RGP1	P16664	663 aa		11.45	□□□□□ -0.58
SHB17	YKR043C	PRP22	P24384	1145 aa	Known RBP	11.45	□□□□□ -0.58
SHB17	YKR043C	FIS1	P40515	155 aa		11.45	□□□□□ -0.58
SHB17	YKR043C	PSP2	P50109	593 aa	Known RBP	11.45	□□□□□ -0.58
SHB17	YKR043C	MDR1	P53258	950 aa		11.45	□□□□□ -0.58
SHB17	YKR043C	YLH47	Q06493	454 aa		11.45	□□□□□ -0.58
SHB17	YKR043C	LDB19	Q12502	818 aa		11.45	□□□□□ -0.58
SHB17	YKR043C	SMC6	Q12749	1114 aa		11.45	□□□□□ -0.58
SHB17	YKR043C	HXK1	P04806	485 aa	Known RBP	11.44	□□□□□ -0.58
SHB17	YKR043C	RME1	P32338	300 aa	Known RBP	11.44	□□□□□ -0.58
SHB17	YKR043C	DUR3	P33413	735 aa		11.44	□□□□□ -0.58
SHB17	YKR043C	ROG3	P43602	733 aa		11.44	□□□□□ -0.58
SHB17	YKR043C	YGL081W	P53156	320 aa		11.44	□□□□□ -0.58
SHB17	YKR043C	PGA2	P53903	129 aa		11.44	□□□□□ -0.58
SHB17	YKR043C	SRD1	P09007	221 aa		11.43	□□□□□ -0.58
SHB17	YKR043C	AFT1	P22149	690 aa		11.43	□□□□□ -0.58
SHB17	YKR043C	MBR1	P23493	339 aa		11.43	□□□□□ -0.58
SHB17	YKR043C	MCM3	P24279	971 aa	Known RBP	11.43	□□□□□ -0.58

Retrieved 100 of 5,963 RNA–protein pairs in 46.6 ms