RNA–Protein interactions for RNA: YKL113C

RAD27, Transcript of 5' to 3' exonuclease, 5' flap endonuclease, yeast

Gene RAD27, Length 1,149 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAD27	YKL113C	CUE3	P53137	624 aa	Known RBP	4.8	□□□□□ -1.64
RAD27	YKL113C	UFD2	P54860	961 aa		4.8	□□□□□ -1.64
RAD27	YKL113C	TIM50	Q02776	476 aa		4.8	□□□□□ -1.64
RAD27	YKL113C	ERO1	Q03103	563 aa		4.8	□□□□□ -1.64
RAD27	YKL113C	TFC6	Q06339	672 aa		4.8	□□□□□ -1.64
RAD27	YKL113C	ESC2	Q06340	456 aa		4.8	□□□□□ -1.64
RAD27	YKL113C	MET32	Q12041	191 aa		4.8	□□□□□ -1.64
RAD27	YKL113C	WRS1	Q12109	432 aa	Known RBP	4.8	□□□□□ -1.64
RAD27	YKL113C	FIG2	P25653	1609 aa		4.79	□□□□□ -1.64
RAD27	YKL113C	HXK1	P04806	485 aa	Known RBP	4.79	□□□□□ -1.64
RAD27	YKL113C	CDC6	P09119	513 aa		4.79	□□□□□ -1.64
RAD27	YKL113C	CAF20	P12962	161 aa	Known RBP	4.79	□□□□□ -1.64
RAD27	YKL113C	HCA4	P20448	770 aa	Known RBP	4.79	□□□□□ -1.64
RAD27	YKL113C	MAK31	P23059	88 aa		4.79	□□□□□ -1.64
RAD27	YKL113C	PKC1	P24583	1151 aa		4.79	□□□□□ -1.64
RAD27	YKL113C	SRP40	P32583	406 aa	Predicted RBP	4.79	□□□□□ -1.64
RAD27	YKL113C	ASH1	P34233	588 aa		4.79	□□□□□ -1.64
RAD27	YKL113C	PEA2	P40091	420 aa		4.79	□□□□□ -1.64
RAD27	YKL113C	JJJ2	P46997	583 aa		4.79	□□□□□ -1.64
RAD27	YKL113C	TY4A-J	P47023	414 aa		4.79	□□□□□ -1.64
RAD27	YKL113C	YJL007C	P47080	104 aa		4.79	□□□□□ -1.64
RAD27	YKL113C	YNL115C	P53925	644 aa		4.79	□□□□□ -1.64
RAD27	YKL113C	HDA1	P53973	706 aa		4.79	□□□□□ -1.64
RAD27	YKL113C	GDE1	Q02979	1223 aa		4.79	□□□□□ -1.64
RAD27	YKL113C	MYO5	Q04439	1219 aa	Known RBP	4.79	□□□□□ -1.64
RAD27	YKL113C	TYW1	Q08960	810 aa	Known RBP	4.79	□□□□□ -1.64
RAD27	YKL113C	CEX1	Q12453	761 aa		4.79	□□□□□ -1.64
RAD27	YKL113C	NOP58	Q12499	511 aa	Known RBP	4.79	□□□□□ -1.64
RAD27	YKL113C	RAD61	Q99359	647 aa		4.79	□□□□□ -1.64
RAD27	YKL113C	GSC2	P40989	1895 aa		4.78	□□□□□ -1.64
RAD27	YKL113C	PET111	P08468	800 aa		4.78	□□□□□ -1.64
RAD27	YKL113C	RGP1	P16664	663 aa		4.78	□□□□□ -1.64
RAD27	YKL113C	VPS1	P21576	704 aa	Known RBP	4.78	□□□□□ -1.64
RAD27	YKL113C	RET1	P22276	1149 aa	Known RBP	4.78	□□□□□ -1.64
RAD27	YKL113C	SPT5	P27692	1063 aa	Known RBP	4.78	□□□□□ -1.64
RAD27	YKL113C	BMH1	P29311	267 aa	Known RBP	4.78	□□□□□ -1.64
RAD27	YKL113C	RPT3	P33298	428 aa	Known RBP	4.78	□□□□□ -1.64
RAD27	YKL113C	UGA2	P38067	497 aa		4.78	□□□□□ -1.64
RAD27	YKL113C	RXT2	P38255	430 aa		4.78	□□□□□ -1.64
RAD27	YKL113C	PAC1	P39946	494 aa	Known RBP	4.78	□□□□□ -1.64
RAD27	YKL113C	FYV10	P40492	516 aa		4.78	□□□□□ -1.64
RAD27	YKL113C	PCI8	P40512	444 aa		4.78	□□□□□ -1.64
RAD27	YKL113C	WAR1	Q03631	944 aa		4.78	□□□□□ -1.64
RAD27	YKL113C	MRD1	Q06106	887 aa	Known RBP	4.78	□□□□□ -1.64
RAD27	YKL113C	PUS5	Q06244	254 aa		4.78	□□□□□ -1.64
RAD27	YKL113C	TOS4	Q06266	489 aa		4.78	□□□□□ -1.64
RAD27	YKL113C	GET3	Q12154	354 aa	Known RBP	4.78	□□□□□ -1.64
RAD27	YKL113C	RAD59	Q12223	238 aa		4.78	□□□□□ -1.64
RAD27	YKL113C	SES1	P07284	462 aa	Known RBP	4.77	□□□□□ -1.65
RAD27	YKL113C	RNR3	P21672	869 aa	Known RBP	4.77	□□□□□ -1.65
RAD27	YKL113C	SLY41	P22215	453 aa		4.77	□□□□□ -1.65
RAD27	YKL113C	URA1	P28272	314 aa	Predicted RBP	4.77	□□□□□ -1.65
RAD27	YKL113C	SEC20	P28791	383 aa		4.77	□□□□□ -1.65
RAD27	YKL113C	MDL2	P33311	773 aa		4.77	□□□□□ -1.65
RAD27	YKL113C	PXL1	P36166	706 aa		4.77	□□□□□ -1.65
RAD27	YKL113C	ERT1	P38140	529 aa		4.77	□□□□□ -1.65
RAD27	YKL113C	YHL050C	P38721	697 aa		4.77	□□□□□ -1.65
RAD27	YKL113C	BIM1	P40013	344 aa		4.77	□□□□□ -1.65
RAD27	YKL113C	VID27	P40157	782 aa		4.77	□□□□□ -1.65
RAD27	YKL113C	TPM2	P40414	161 aa		4.77	□□□□□ -1.65
RAD27	YKL113C	PIP2	P52960	996 aa		4.77	□□□□□ -1.65
RAD27	YKL113C	NNF2	P53253	936 aa		4.77	□□□□□ -1.65
RAD27	YKL113C	PRP42	Q03776	544 aa	Known RBP	4.77	□□□□□ -1.65
RAD27	YKL113C	YPL260W	Q08977	551 aa		4.77	□□□□□ -1.65
RAD27	YKL113C	YDL176W	Q12027	708 aa		4.77	□□□□□ -1.65
RAD27	YKL113C	MYO1	P08964	1928 aa		4.77	□□□□□ -1.65
RAD27	YKL113C	MET6	P05694	767 aa	Known RBP	4.76	□□□□□ -1.65
RAD27	YKL113C	ARG82	P07250	355 aa		4.76	□□□□□ -1.65
RAD27	YKL113C	ESS1	P22696	170 aa		4.76	□□□□□ -1.65
RAD27	YKL113C	SMY1	P32364	656 aa	Known RBP	4.76	□□□□□ -1.65
RAD27	YKL113C	YKL222C	P35995	705 aa		4.76	□□□□□ -1.65
RAD27	YKL113C	ADE17	P38009	592 aa	Known RBP	4.76	□□□□□ -1.65
RAD27	YKL113C	YBL086C	P38177	466 aa		4.76	□□□□□ -1.65
RAD27	YKL113C	PSY4	P38193	441 aa		4.76	□□□□□ -1.65
RAD27	YKL113C	TOM71	P38825	639 aa	Known RBP	4.76	□□□□□ -1.65
RAD27	YKL113C	NOC2	P39744	710 aa	Known RBP	4.76	□□□□□ -1.65
RAD27	YKL113C	MSH4	P40965	878 aa	Predicted RBP	4.76	□□□□□ -1.65
RAD27	YKL113C	DAK2	P43550	591 aa		4.76	□□□□□ -1.65
RAD27	YKL113C	APL6	P46682	809 aa		4.76	□□□□□ -1.65
RAD27	YKL113C	YGL138C	P53122	345 aa		4.76	□□□□□ -1.65
RAD27	YKL113C	RTC4	P53850	401 aa		4.76	□□□□□ -1.65
RAD27	YKL113C	RPT6	Q01939	405 aa	Known RBP	4.76	□□□□□ -1.65
RAD27	YKL113C	VMS1	Q04311	632 aa	Known RBP	4.76	□□□□□ -1.65
RAD27	YKL113C	EIS1	Q05050	843 aa	Known RBP	4.76	□□□□□ -1.65
RAD27	YKL113C	LCB5	Q06147	687 aa	Known RBP	4.76	□□□□□ -1.65
RAD27	YKL113C	MMR1	Q06324	491 aa		4.76	□□□□□ -1.65
RAD27	YKL113C	CLF1	Q12309	687 aa	Predicted RBP	4.76	□□□□□ -1.65
RAD27	YKL113C	PTC5	Q12511	572 aa		4.76	□□□□□ -1.65
RAD27	YKL113C	NBL1	Q3E7Y6	73 aa		4.76	□□□□□ -1.65
RAD27	YKL113C	FOB1	O13329	566 aa		4.75	□□□□□ -1.65
RAD27	YKL113C	ALG1	P16661	449 aa		4.75	□□□□□ -1.65
RAD27	YKL113C	SSA4	P22202	642 aa	Known RBP	4.75	□□□□□ -1.65
RAD27	YKL113C	RIT1	P23796	513 aa		4.75	□□□□□ -1.65
RAD27	YKL113C	BCD1	P38772	366 aa		4.75	□□□□□ -1.65
RAD27	YKL113C	CCT3	P39077	534 aa	Known RBP	4.75	□□□□□ -1.65
RAD27	YKL113C	PES4	P39684	611 aa		4.75	□□□□□ -1.65
RAD27	YKL113C	CSM2	P40465	213 aa		4.75	□□□□□ -1.65
RAD27	YKL113C	CEP3	P40969	608 aa		4.75	□□□□□ -1.65
RAD27	YKL113C	PUS6	P53294	404 aa		4.75	□□□□□ -1.65
RAD27	YKL113C	RET3	P53600	189 aa		4.75	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 33.2 ms