RNA–Protein interactions for RNA: YJR060W

CBF1, Transcript of Basic helix-loop-helix (bHLH) protein, yeastyeast

Gene CBF1, Length 1,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF1YJR060W YNR014WP53719 212 aa6.54□□□□□ -1.36
CBF1YJR060W NSG2P53898 299 aa6.54□□□□□ -1.36
CBF1YJR060W DNM1P54861 757 aa6.54□□□□□ -1.36
CBF1YJR060W CDC55Q00362 526 aa6.54□□□□□ -1.36
CBF1YJR060W RIX7Q07844 837 aaKnown RBP6.54□□□□□ -1.36
CBF1YJR060W RPT1P33299 467 aaKnown RBP6.53□□□□□ -1.36
CBF1YJR060W MDJ1P35191 511 aa6.53□□□□□ -1.36
CBF1YJR060W YKL222CP35995 705 aa6.53□□□□□ -1.36
CBF1YJR060W SBE2P42223 864 aaKnown RBP6.53□□□□□ -1.36
CBF1YJR060W SRT1Q03175 343 aa6.53□□□□□ -1.36
CBF1YJR060W GPI13Q07830 1017 aa6.53□□□□□ -1.36
CBF1YJR060W PYC2P32327 1180 aaKnown RBP6.52□□□□□ -1.37
CBF1YJR060W PGM2P37012 569 aaKnown RBP6.52□□□□□ -1.37
CBF1YJR060W ECM2P38241 364 aaKnown RBP6.52□□□□□ -1.37
CBF1YJR060W BOI2P39969 1040 aa6.52□□□□□ -1.37
CBF1YJR060W FYV10P40492 516 aa6.52□□□□□ -1.37
CBF1YJR060W INP51P40559 946 aaKnown RBP6.52□□□□□ -1.37
CBF1YJR060W YGL082WP53155 381 aa6.52□□□□□ -1.37
CBF1YJR060W VPS64Q03944 604 aa6.52□□□□□ -1.37
CBF1YJR060W BSC2Q05611 235 aa6.52□□□□□ -1.37
CBF1YJR060W CTT1P06115 562 aa6.51□□□□□ -1.37
CBF1YJR060W MRP7P12687 371 aa6.51□□□□□ -1.37
CBF1YJR060W GCD6P32501 712 aaKnown RBP6.51□□□□□ -1.37
CBF1YJR060W ERT1P38140 529 aa6.51□□□□□ -1.37
CBF1YJR060W PFF1P38244 976 aa6.51□□□□□ -1.37
CBF1YJR060W GIS4Q04233 774 aa6.51□□□□□ -1.37
CBF1YJR060W FPR4Q06205 392 aaPredicted RBP6.51□□□□□ -1.37
CBF1YJR060W MAG2Q06436 670 aaKnown RBP6.51□□□□□ -1.37
CBF1YJR060W YDR306CQ06640 478 aa6.51□□□□□ -1.37
CBF1YJR060W NHA1Q99271 985 aa6.51□□□□□ -1.37
CBF1YJR060W SWI1P09547 1314 aa6.5□□□□□ -1.37
CBF1YJR060W PHO4P07270 312 aaKnown RBP6.5□□□□□ -1.37
CBF1YJR060W FUS1P11710 512 aa6.5□□□□□ -1.37
CBF1YJR060W NAR1P23503 491 aaKnown RBP6.5□□□□□ -1.37
CBF1YJR060W MCM2P29469 868 aa6.5□□□□□ -1.37
CBF1YJR060W BRN1P38170 754 aa6.5□□□□□ -1.37
CBF1YJR060W YHL008CP38750 627 aa6.5□□□□□ -1.37
CBF1YJR060W MAD1P40957 749 aa6.5□□□□□ -1.37
CBF1YJR060W YFL066CP43538 392 aa6.5□□□□□ -1.37
CBF1YJR060W YJR008WP47085 338 aa6.5□□□□□ -1.37
CBF1YJR060W PKH1Q03407 766 aa6.5□□□□□ -1.37
CBF1YJR060W IRC3Q06683 689 aa6.5□□□□□ -1.37
CBF1YJR060W BDF2Q07442 638 aa6.5□□□□□ -1.37
CBF1YJR060W DUR1,2P32528 1835 aaKnown RBP6.5□□□□□ -1.37
CBF1YJR060W RPS9BP05755 195 aaKnown RBP6.49□□□□□ -1.37
CBF1YJR060W APL2P36000 726 aaPredicted RBP6.49□□□□□ -1.37
CBF1YJR060W NUP133P36161 1157 aa6.49□□□□□ -1.37
CBF1YJR060W DAK2P43550 591 aa6.49□□□□□ -1.37
CBF1YJR060W EAF6P47128 113 aa6.49□□□□□ -1.37
CBF1YJR060W SAM37P50110 327 aa6.49□□□□□ -1.37
CBF1YJR060W BIO5P53744 561 aaKnown RBP6.49□□□□□ -1.37
CBF1YJR060W ZDS2P54786 942 aa6.49□□□□□ -1.37
CBF1YJR060W CTR9P89105 1077 aa6.49□□□□□ -1.37
CBF1YJR060W NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.49□□□□□ -1.37not detected
CBF1YJR060W SPR28Q04921 423 aa6.49□□□□□ -1.37
CBF1YJR060W CTI6Q08923 506 aa6.49□□□□□ -1.37
CBF1YJR060W RVB2Q12464 471 aaKnown RBP6.49□□□□□ -1.37
CBF1YJR060W SAC3P46674 1301 aa6.49□□□□□ -1.37
CBF1YJR060W FIG2P25653 1609 aa6.48□□□□□ -1.37
CBF1YJR060W PEP7P32609 515 aa6.48□□□□□ -1.37
CBF1YJR060W ICP55P40051 511 aa6.48□□□□□ -1.37
CBF1YJR060W SOK2P53438 785 aaPredicted RBP6.48□□□□□ -1.37
CBF1YJR060W TDA6Q06466 467 aa6.48□□□□□ -1.37
CBF1YJR060W NOC3Q07896 663 aaPredicted RBP6.48□□□□□ -1.37
CBF1YJR060W PRS1P32895 427 aaKnown RBP6.47□□□□□ -1.37
CBF1YJR060W VAC8P39968 578 aa6.47□□□□□ -1.37
CBF1YJR060W ERO1Q03103 563 aa6.47□□□□□ -1.37
CBF1YJR060W RMD1Q03441 430 aa6.47□□□□□ -1.37
CBF1YJR060W FAS2P19097 1887 aaKnown RBP6.47□□□□□ -1.37
CBF1YJR060W SMY1P32364 656 aaKnown RBP6.46□□□□□ -1.38
CBF1YJR060W VPS35P34110 944 aa6.46□□□□□ -1.38
CBF1YJR060W TFA2P36145 328 aa6.46□□□□□ -1.38
CBF1YJR060W GIP2P40036 548 aa6.46□□□□□ -1.38
CBF1YJR060W GUP1P53154 560 aa6.46□□□□□ -1.38
CBF1YJR060W ALD6P54115 500 aaKnown RBP6.46□□□□□ -1.38
CBF1YJR060W SOG2Q08817 791 aa6.46□□□□□ -1.38
CBF1YJR060W OXR1Q08952 273 aa6.46□□□□□ -1.38
CBF1YJR060W SLP1Q12232 587 aa6.46□□□□□ -1.38
CBF1YJR060W GRX6Q12438 231 aa6.46□□□□□ -1.38
CBF1YJR060W YOL098CQ12496 1037 aa6.46□□□□□ -1.38
CBF1YJR060W FLP1P03870 423 aa6.45□□□□□ -1.38
CBF1YJR060W CLN2P20438 545 aa6.45□□□□□ -1.38
CBF1YJR060W MCX1P38323 520 aaPredicted RBP6.45□□□□□ -1.38
CBF1YJR060W CIC1P38779 376 aaKnown RBP6.45□□□□□ -1.38
CBF1YJR060W RPS26AP39938 119 aaKnown RBP6.45□□□□□ -1.38
CBF1YJR060W RPS26BP39939 119 aaKnown RBP6.45□□□□□ -1.38
CBF1YJR060W TED1P40533 473 aa6.45□□□□□ -1.38
CBF1YJR060W YJR124CP47159 448 aa6.45□□□□□ -1.38
CBF1YJR060W UBP16Q02863 499 aa6.45□□□□□ -1.38
CBF1YJR060W SYF1Q04048 859 aaPredicted RBP6.45□□□□□ -1.38
CBF1YJR060W PUS1Q12211 544 aaKnown RBP6.45□□□□□ -1.38
CBF1YJR060W GLO4Q12320 285 aa6.45□□□□□ -1.38
CBF1YJR060W SUP35P05453 685 aaKnown RBP6.44□□□□□ -1.38
CBF1YJR060W RAD2P07276 1031 aa6.44□□□□□ -1.38
CBF1YJR060W RPS19AP07280 144 aaKnown RBP6.44□□□□□ -1.38
CBF1YJR060W RPS19BP07281 144 aaPredicted RBP6.44□□□□□ -1.38
CBF1YJR060W YIL092WP40497 633 aa6.44□□□□□ -1.38
CBF1YJR060W KIN4Q01919 800 aa6.44□□□□□ -1.38
CBF1YJR060W YMR187CQ03236 431 aa6.44□□□□□ -1.38
CBF1YJR060W MTC5Q03897 1148 aa6.44□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 65.1 ms