RNA–Protein interactions for RNA: YJL164C

TPK1, Transcript of cAMP-dependent protein kinase catalytic subunit, yeast

Gene TPK1, Length 1,194 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPK1	YJL164C	SSL2	Q00578	843 aa		7.01	□□□□□ -1.29
TPK1	YJL164C	BET4	Q00618	327 aa		7.01	□□□□□ -1.29
TPK1	YJL164C	MAK21	Q12176	1025 aa	Known RBP	7.01	□□□□□ -1.29
TPK1	YJL164C	JIP3	O13555	125 aa		7	□□□□□ -1.29
TPK1	YJL164C	TOM70	P07213	617 aa	Known RBP	7	□□□□□ -1.29
TPK1	YJL164C	TPM1	P17536	199 aa	Known RBP	7	□□□□□ -1.29
TPK1	YJL164C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	7	□□□□□ -1.29	not detected
TPK1	YJL164C	PAP1	P29468	568 aa	Known RBP	7	□□□□□ -1.29
TPK1	YJL164C	SMY1	P32364	656 aa	Known RBP	7	□□□□□ -1.29
TPK1	YJL164C	GCD11	P32481	527 aa	Known RBP	7	□□□□□ -1.29
TPK1	YJL164C	DID4	P36108	232 aa		7	□□□□□ -1.29
TPK1	YJL164C	YHB1	P39676	399 aa	Known RBP	7	□□□□□ -1.29
TPK1	YJL164C	VID27	P40157	782 aa		7	□□□□□ -1.29
TPK1	YJL164C	YIL092W	P40497	633 aa		7	□□□□□ -1.29
TPK1	YJL164C	GVP36	P40531	326 aa	Known RBP	7	□□□□□ -1.29
TPK1	YJL164C	TFG2	P41896	400 aa	Predicted RBP	7	□□□□□ -1.29
TPK1	YJL164C	MET12	P46151	657 aa		7	□□□□□ -1.29
TPK1	YJL164C	NPA3	P47122	385 aa		7	□□□□□ -1.29
TPK1	YJL164C	CIK1	Q01649	594 aa		7	□□□□□ -1.29
TPK1	YJL164C	VPS20	Q04272	221 aa		7	□□□□□ -1.29
TPK1	YJL164C	RRN11	Q04712	507 aa		7	□□□□□ -1.29
TPK1	YJL164C	JIP5	Q06214	492 aa	Predicted RBP	7	□□□□□ -1.29
TPK1	YJL164C	SPP382	Q06411	708 aa	Predicted RBP	7	□□□□□ -1.29
TPK1	YJL164C	SYO1	Q07395	620 aa		7	□□□□□ -1.29
TPK1	YJL164C	TFB4	Q12004	338 aa		7	□□□□□ -1.29
TPK1	YJL164C	YDL176W	Q12027	708 aa		7	□□□□□ -1.29
TPK1	YJL164C	HAP1	P0CE41	1502 aa		7	□□□□□ -1.29
TPK1	YJL164C	VAS1	P07806	1104 aa	Known RBP	6.99	□□□□□ -1.29
TPK1	YJL164C	YML002W	P0CF17	737 aa		6.99	□□□□□ -1.29
TPK1	YJL164C	ADH4	P10127	382 aa		6.99	□□□□□ -1.29
TPK1	YJL164C	RPB4	P20433	221 aa	Predicted RBP	6.99	□□□□□ -1.29
TPK1	YJL164C	RPO26	P20435	155 aa		6.99	□□□□□ -1.29
TPK1	YJL164C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	6.99	□□□□□ -1.29	not detected
TPK1	YJL164C	MEF1	P25039	761 aa		6.99	□□□□□ -1.29
TPK1	YJL164C	DLD1	P32891	587 aa		6.99	□□□□□ -1.29
TPK1	YJL164C	FES1	P38260	290 aa		6.99	□□□□□ -1.29
TPK1	YJL164C	AMN1	P38285	549 aa	Predicted RBP	6.99	□□□□□ -1.29
TPK1	YJL164C	CCT5	P40413	562 aa	Known RBP	6.99	□□□□□ -1.29
TPK1	YJL164C	IES1	P43579	692 aa		6.99	□□□□□ -1.29
TPK1	YJL164C	TRS85	P46944	698 aa		6.99	□□□□□ -1.29
TPK1	YJL164C	CTH1	P47976	325 aa		6.99	□□□□□ -1.29
TPK1	YJL164C	PRP43	P53131	767 aa	Known RBP	6.99	□□□□□ -1.29
TPK1	YJL164C	ELA1	P53861	379 aa	Predicted RBP	6.99	□□□□□ -1.29
TPK1	YJL164C	PNG1	Q02890	363 aa		6.99	□□□□□ -1.29
TPK1	YJL164C	TSR2	Q06672	205 aa	Known RBP	6.99	□□□□□ -1.29
TPK1	YJL164C	YCG1	Q06680	1035 aa		6.99	□□□□□ -1.29
TPK1	YJL164C	RKM1	Q08961	583 aa	Predicted RBP	6.99	□□□□□ -1.29
TPK1	YJL164C	SCM3	Q12334	223 aa		6.99	□□□□□ -1.29
TPK1	YJL164C	YRM1	Q12340	786 aa		6.99	□□□□□ -1.29
TPK1	YJL164C	RKR1	Q04781	1562 aa		6.99	□□□□□ -1.29
TPK1	YJL164C	PSK1	P31374	1356 aa		6.98	□□□□□ -1.29
TPK1	YJL164C	ADE3	P07245	946 aa	Known RBP	6.98	□□□□□ -1.29
TPK1	YJL164C	NMT1	P14743	455 aa		6.98	□□□□□ -1.29
TPK1	YJL164C	PIH1	P38768	344 aa		6.98	□□□□□ -1.29
TPK1	YJL164C	STB1	P42845	420 aa		6.98	□□□□□ -1.29
TPK1	YJL164C	RBL2	P48606	106 aa	Known RBP	6.98	□□□□□ -1.29
TPK1	YJL164C	OCA1	P50946	238 aa	Predicted RBP	6.98	□□□□□ -1.29
TPK1	YJL164C	DCP2	P53550	970 aa	Known RBP	6.98	□□□□□ -1.29
TPK1	YJL164C	COG6	P53959	839 aa		6.98	□□□□□ -1.29
TPK1	YJL164C	YKR005C	Q02203	525 aa		6.98	□□□□□ -1.29
TPK1	YJL164C	CWC15	Q03772	175 aa	Known RBP	6.98	□□□□□ -1.29
TPK1	YJL164C	YDR444W	Q04093	687 aa		6.98	□□□□□ -1.29
TPK1	YJL164C	ECM11	Q04110	302 aa		6.98	□□□□□ -1.29
TPK1	YJL164C	CSC1	Q06538	782 aa		6.98	□□□□□ -1.29
TPK1	YJL164C	CLP1	Q08685	445 aa	Predicted RBP	6.98	□□□□□ -1.29
TPK1	YJL164C	YOL098C	Q12496	1037 aa		6.98	□□□□□ -1.29
TPK1	YJL164C	SNF2	P22082	1703 aa		6.98	□□□□□ -1.29
TPK1	YJL164C	YPR089W	O13585	888 aa		6.97	□□□□□ -1.29
TPK1	YJL164C	YCR016W	P25617	290 aa	Known RBP	6.97	□□□□□ -1.29
TPK1	YJL164C	SQT1	P35184	431 aa		6.97	□□□□□ -1.29
TPK1	YJL164C	CIC1	P38779	376 aa	Known RBP	6.97	□□□□□ -1.29
TPK1	YJL164C	BFA1	P47113	574 aa		6.97	□□□□□ -1.29
TPK1	YJL164C	IPI3	P53877	555 aa		6.97	□□□□□ -1.29
TPK1	YJL164C	SFB2	P53953	876 aa		6.97	□□□□□ -1.29
TPK1	YJL164C	YML020W	Q03722	664 aa		6.97	□□□□□ -1.29
TPK1	YJL164C	VIK1	Q12045	647 aa		6.97	□□□□□ -1.29
TPK1	YJL164C	MSH5	Q12175	901 aa		6.97	□□□□□ -1.29
TPK1	YJL164C	YSP2	Q06681	1438 aa		6.96	□□□□□ -1.3
TPK1	YJL164C	KCC4	P25389	1037 aa		6.96	□□□□□ -1.3
TPK1	YJL164C	POL4	P25615	582 aa		6.96	□□□□□ -1.3
TPK1	YJL164C	SEC21	P32074	935 aa	Known RBP	6.96	□□□□□ -1.3
TPK1	YJL164C	PDB1	P32473	366 aa	Known RBP	6.96	□□□□□ -1.3
TPK1	YJL164C	RIB7	P33312	244 aa		6.96	□□□□□ -1.3
TPK1	YJL164C	NPL4	P33755	580 aa		6.96	□□□□□ -1.3
TPK1	YJL164C	YHR020W	P38708	688 aa	Known RBP	6.96	□□□□□ -1.3
TPK1	YJL164C	TDA11	P38854	504 aa		6.96	□□□□□ -1.3
TPK1	YJL164C	RTS1	P38903	757 aa		6.96	□□□□□ -1.3
TPK1	YJL164C	INA22	P40576	216 aa		6.96	□□□□□ -1.3
TPK1	YJL164C	ALB1	P47019	175 aa	Predicted RBP	6.96	□□□□□ -1.3
TPK1	YJL164C	PEX14	P53112	341 aa		6.96	□□□□□ -1.3
TPK1	YJL164C	ATG17	Q06410	417 aa		6.96	□□□□□ -1.3
TPK1	YJL164C	YLH47	Q06493	454 aa		6.96	□□□□□ -1.3
TPK1	YJL164C	PMT7	Q06644	662 aa		6.96	□□□□□ -1.3
TPK1	YJL164C	YOR352W	Q08816	343 aa		6.96	□□□□□ -1.3
TPK1	YJL164C	TY3B-G	Q99315	1547 aa		6.96	□□□□□ -1.3
TPK1	YJL164C	TRL1	P09880	827 aa	Known RBP	6.95	□□□□□ -1.3
TPK1	YJL164C	MSS116	P15424	664 aa	Known RBP	6.95	□□□□□ -1.3
TPK1	YJL164C	ATE1	P16639	503 aa		6.95	□□□□□ -1.3
TPK1	YJL164C	OPI1	P21957	404 aa		6.95	□□□□□ -1.3
TPK1	YJL164C	RME1	P32338	300 aa	Known RBP	6.95	□□□□□ -1.3

Retrieved 100 of 5,963 RNA–protein pairs in 38.1 ms