RNA–Protein interactions for RNA: YHR065C

RRP3, Transcript of Protein involved in rRNA processing, yeast

Gene RRP3, Length 1,506 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRP3	YHR065C	TRL1	P09880	827 aa	Known RBP	5.53	□□□□□ -1.52
RRP3	YHR065C	SRS2	P12954	1174 aa		5.53	□□□□□ -1.52
RRP3	YHR065C	CAF20	P12962	161 aa	Known RBP	5.53	□□□□□ -1.52
RRP3	YHR065C	PDC5	P16467	563 aa	Known RBP	5.53	□□□□□ -1.52
RRP3	YHR065C	MSC7	P38694	644 aa		5.53	□□□□□ -1.52
RRP3	YHR065C	HXT5	P38695	592 aa		5.53	□□□□□ -1.52
RRP3	YHR065C	RPT4	P53549	437 aa	Known RBP	5.53	□□□□□ -1.52
RRP3	YHR065C	TDA6	Q06466	467 aa		5.53	□□□□□ -1.52
RRP3	YHR065C	LSP1	Q12230	341 aa	Known RBP	5.53	□□□□□ -1.52
RRP3	YHR065C	FAS2	P19097	1887 aa	Known RBP	5.53	□□□□□ -1.52
RRP3	YHR065C	RPS9B	P05755	195 aa	Known RBP	5.53	□□□□□ -1.52
RRP3	YHR065C	LCB1	P25045	558 aa	Known RBP	5.53	□□□□□ -1.52
RRP3	YHR065C	VPS24	P36095	224 aa	Known RBP	5.53	□□□□□ -1.52
RRP3	YHR065C	MET1	P36150	593 aa		5.53	□□□□□ -1.52
RRP3	YHR065C	IOC3	P43596	787 aa		5.53	□□□□□ -1.52
RRP3	YHR065C	EAF6	P47128	113 aa		5.53	□□□□□ -1.52
RRP3	YHR065C	CWH41	P53008	833 aa		5.53	□□□□□ -1.52
RRP3	YHR065C	MTO1	P53070	669 aa		5.53	□□□□□ -1.52
RRP3	YHR065C	YNR014W	P53719	212 aa		5.53	□□□□□ -1.52
RRP3	YHR065C	ECM23	Q02710	187 aa		5.53	□□□□□ -1.52
RRP3	YHR065C	TAH18	Q12181	623 aa		5.53	□□□□□ -1.52
RRP3	YHR065C	HKR1	P41809	1802 aa		5.53	□□□□□ -1.52
RRP3	YHR065C	LAM4	P38800	1345 aa		5.52	□□□□□ -1.53
RRP3	YHR065C	MCX1	P38323	520 aa	Predicted RBP	5.52	□□□□□ -1.53
RRP3	YHR065C	YMR147W	P40218	223 aa	Known RBP	5.52	□□□□□ -1.53
RRP3	YHR065C	SKP1	P52286	194 aa		5.52	□□□□□ -1.53
RRP3	YHR065C	IRC4	Q03036	179 aa		5.52	□□□□□ -1.53
RRP3	YHR065C	HEH2	Q03281	663 aa		5.52	□□□□□ -1.53
RRP3	YHR065C	KAR5	Q04746	504 aa		5.52	□□□□□ -1.53
RRP3	YHR065C	INM2	Q05533	292 aa		5.52	□□□□□ -1.53
RRP3	YHR065C	SSF2	Q12153	453 aa	Predicted RBP	5.52	□□□□□ -1.53
RRP3	YHR065C	TRS33	Q99394	268 aa		5.52	□□□□□ -1.53
RRP3	YHR065C	RET1	P22276	1149 aa	Known RBP	5.51	□□□□□ -1.53
RRP3	YHR065C	KAP122	P32767	1081 aa		5.51	□□□□□ -1.53
RRP3	YHR065C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	5.51	□□□□□ -1.53	not detected
RRP3	YHR065C	GRX7	P38068	203 aa		5.51	□□□□□ -1.53
RRP3	YHR065C	SKN7	P38889	622 aa		5.51	□□□□□ -1.53
RRP3	YHR065C	YIR042C	P40586	236 aa		5.51	□□□□□ -1.53
RRP3	YHR065C	YFH7	P43591	353 aa		5.51	□□□□□ -1.53
RRP3	YHR065C	IRC8	P47046	822 aa		5.51	□□□□□ -1.53
RRP3	YHR065C	EAF7	P53911	425 aa	Known RBP	5.51	□□□□□ -1.53
RRP3	YHR065C	YMR187C	Q03236	431 aa		5.51	□□□□□ -1.53
RRP3	YHR065C	YKU70	P32807	602 aa		5.5	□□□□□ -1.53
RRP3	YHR065C	YER156C	P40093	338 aa	Known RBP	5.5	□□□□□ -1.53
RRP3	YHR065C	KRI1	P42846	591 aa	Known RBP	5.5	□□□□□ -1.53
RRP3	YHR065C	CCT8	P47079	568 aa	Known RBP	5.5	□□□□□ -1.53
RRP3	YHR065C	KIN4	Q01919	800 aa		5.5	□□□□□ -1.53
RRP3	YHR065C	WRS1	Q12109	432 aa	Known RBP	5.5	□□□□□ -1.53
RRP3	YHR065C	PEP3	P27801	918 aa		5.49	□□□□□ -1.53
RRP3	YHR065C	PTK1	P36002	662 aa	Predicted RBP	5.49	□□□□□ -1.53
RRP3	YHR065C	BOI1	P38041	980 aa	Known RBP	5.49	□□□□□ -1.53
RRP3	YHR065C	NCL1	P38205	684 aa	Known RBP	5.49	□□□□□ -1.53
RRP3	YHR065C	SNF3	P10870	884 aa		5.48	□□□□□ -1.53
RRP3	YHR065C	UBX7	P38349	436 aa		5.48	□□□□□ -1.53
RRP3	YHR065C	CIC1	P38779	376 aa	Known RBP	5.48	□□□□□ -1.53
RRP3	YHR065C	CRG1	P38892	291 aa	RIP-Chip data	5.48	□□□□□ -1.53	not detected
RRP3	YHR065C	CUS1	Q02554	436 aa	Predicted RBP	5.48	□□□□□ -1.53
RRP3	YHR065C	PRP42	Q03776	544 aa	Known RBP	5.48	□□□□□ -1.53
RRP3	YHR065C	VPS20	Q04272	221 aa		5.48	□□□□□ -1.53
RRP3	YHR065C	SPN1	Q06505	410 aa	Predicted RBP	5.48	□□□□□ -1.53
RRP3	YHR065C	PPM2	Q08282	695 aa		5.48	□□□□□ -1.53
RRP3	YHR065C	PUP1	P25043	261 aa		5.48	□□□□□ -1.53
RRP3	YHR065C	ICL1	P28240	557 aa	Predicted RBP	5.48	□□□□□ -1.53
RRP3	YHR065C	SUV3	P32580	737 aa		5.48	□□□□□ -1.53
RRP3	YHR065C	RPT3	P33298	428 aa	Known RBP	5.48	□□□□□ -1.53
RRP3	YHR065C	RRP8	P38961	392 aa	Known RBP	5.48	□□□□□ -1.53
RRP3	YHR065C	SHC1	P39000	512 aa		5.48	□□□□□ -1.53
RRP3	YHR065C	NPA3	P47122	385 aa		5.48	□□□□□ -1.53
RRP3	YHR065C	TOS4	Q06266	489 aa		5.48	□□□□□ -1.53
RRP3	YHR065C	ACK1	Q07622	623 aa	Predicted RBP	5.48	□□□□□ -1.53
RRP3	YHR065C	PSK2	Q08217	1101 aa		5.48	□□□□□ -1.53
RRP3	YHR065C	RPL19A	P0CX82	189 aa	Known RBP	5.47	□□□□□ -1.53
RRP3	YHR065C	RPL19B	P0CX83	189 aa	Predicted RBP	5.47	□□□□□ -1.53
RRP3	YHR065C	COQ1	P18900	473 aa		5.47	□□□□□ -1.53
RRP3	YHR065C	IMP2'	P32351	346 aa		5.47	□□□□□ -1.53
RRP3	YHR065C	MDL2	P33311	773 aa		5.47	□□□□□ -1.53
RRP3	YHR065C	APM2	P38700	605 aa		5.47	□□□□□ -1.53
RRP3	YHR065C	RTS1	P38903	757 aa		5.47	□□□□□ -1.53
RRP3	YHR065C	BDH2	P39713	417 aa		5.47	□□□□□ -1.53
RRP3	YHR065C	SNF7	P39929	240 aa	Known RBP	5.47	□□□□□ -1.53
RRP3	YHR065C	PIP2	P52960	996 aa		5.47	□□□□□ -1.53
RRP3	YHR065C	RRG1	Q12167	365 aa	Predicted RBP	5.47	□□□□□ -1.53
RRP3	YHR065C	MATALPHA2	P0CY08	210 aa		5.46	□□□□□ -1.54
RRP3	YHR065C	HMLALPHA2	P0CY09	210 aa		5.46	□□□□□ -1.54
RRP3	YHR065C	BIK1	P11709	440 aa		5.46	□□□□□ -1.54
RRP3	YHR065C	ROX1	P25042	368 aa		5.46	□□□□□ -1.54
RRP3	YHR065C	MSP1	P28737	362 aa		5.46	□□□□□ -1.54
RRP3	YHR065C	YHL017W	P38745	532 aa		5.46	□□□□□ -1.54
RRP3	YHR065C	SLN1	P39928	1220 aa	Predicted RBP	5.46	□□□□□ -1.54
RRP3	YHR065C	HYR1	P40581	163 aa	Known RBP	5.46	□□□□□ -1.54
RRP3	YHR065C	YKE2	P52553	114 aa		5.46	□□□□□ -1.54
RRP3	YHR065C	HST1	P53685	503 aa		5.46	□□□□□ -1.54
RRP3	YHR065C	ARP5	P53946	755 aa		5.46	□□□□□ -1.54
RRP3	YHR065C	RPS15	Q01855	142 aa	Known RBP	5.46	□□□□□ -1.54
RRP3	YHR065C	ESF1	Q06344	628 aa	Known RBP	5.46	□□□□□ -1.54
RRP3	YHR065C	GAS5	Q08193	484 aa		5.46	□□□□□ -1.54
RRP3	YHR065C	PGA3	Q12746	312 aa	Known RBP	5.46	□□□□□ -1.54
RRP3	YHR065C	RER2	P35196	286 aa		5.45	□□□□□ -1.54
RRP3	YHR065C	QDR2	P40474	542 aa		5.45	□□□□□ -1.54
RRP3	YHR065C	PRK1	P40494	810 aa		5.45	□□□□□ -1.54

Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms