RNA–Protein interactions for RNA: YFR027W

ECO1, Transcript of Acetyltransferase, yeast

Gene ECO1, Length 846 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECO1	YFR027W	PEX7	P39108	375 aa		4.2	□□□□□ -1.74
ECO1	YFR027W	SDH1	Q00711	640 aa		4.2	□□□□□ -1.74
ECO1	YFR027W	RAT1	Q02792	1006 aa	Known RBP	4.2	□□□□□ -1.74
ECO1	YFR027W	TMA46	Q12000	345 aa	Known RBP	4.2	□□□□□ -1.74
ECO1	YFR027W	PTC5	Q12511	572 aa		4.2	□□□□□ -1.74
ECO1	YFR027W	SAM35	P14693	329 aa		4.19	□□□□□ -1.74
ECO1	YFR027W	YCR015C	P25616	317 aa		4.19	□□□□□ -1.74
ECO1	YFR027W	RAD27	P26793	382 aa		4.19	□□□□□ -1.74
ECO1	YFR027W	RGD1	P38339	666 aa		4.19	□□□□□ -1.74
ECO1	YFR027W	YJL045W	P47052	634 aa		4.19	□□□□□ -1.74
ECO1	YFR027W	CWC22	P53333	577 aa	Known RBP	4.19	□□□□□ -1.74
ECO1	YFR027W	TRE1	Q08919	783 aa		4.19	□□□□□ -1.74
ECO1	YFR027W	YPL260W	Q08977	551 aa		4.19	□□□□□ -1.74
ECO1	YFR027W	DBP5	P20449	482 aa	Known RBP	4.18	□□□□□ -1.74
ECO1	YFR027W	SRO9	P25567	434 aa	Known RBP	4.18	□□□□□ -1.74
ECO1	YFR027W	SYP1	P25623	870 aa	Known RBP	4.18	□□□□□ -1.74
ECO1	YFR027W	KIP1	P28742	1111 aa		4.18	□□□□□ -1.74
ECO1	YFR027W	RER2	P35196	286 aa		4.18	□□□□□ -1.74
ECO1	YFR027W	PAM1	P37304	830 aa	Known RBP	4.18	□□□□□ -1.74
ECO1	YFR027W	RPN3	P40016	523 aa	Known RBP	4.18	□□□□□ -1.74
ECO1	YFR027W	CNN1	P43618	361 aa		4.18	□□□□□ -1.74
ECO1	YFR027W	ORC3	P54790	616 aa		4.18	□□□□□ -1.74
ECO1	YFR027W	ECM5	Q03214	1411 aa		4.18	□□□□□ -1.74
ECO1	YFR027W	INO80	P53115	1489 aa		4.18	□□□□□ -1.74
ECO1	YFR027W	HSP82	P02829	709 aa	Known RBP	4.17	□□□□□ -1.74
ECO1	YFR027W	CLN2	P20438	545 aa		4.17	□□□□□ -1.74
ECO1	YFR027W	YSC84	P32793	468 aa		4.17	□□□□□ -1.74
ECO1	YFR027W	PRS1	P32895	427 aa	Known RBP	4.17	□□□□□ -1.74
ECO1	YFR027W	MDL2	P33311	773 aa		4.17	□□□□□ -1.74
ECO1	YFR027W	BAP2	P38084	609 aa		4.17	□□□□□ -1.74
ECO1	YFR027W	YHL012W	P38709	493 aa		4.17	□□□□□ -1.74
ECO1	YFR027W	NMD3	P38861	518 aa	Known RBP	4.17	□□□□□ -1.74
ECO1	YFR027W	NIT1	P40447	199 aa		4.17	□□□□□ -1.74
ECO1	YFR027W	MPH1	P40562	993 aa		4.17	□□□□□ -1.74
ECO1	YFR027W	EEB1	Q02891	456 aa		4.17	□□□□□ -1.74
ECO1	YFR027W	PLP2	Q12017	286 aa		4.17	□□□□□ -1.74
ECO1	YFR027W	PIN2	Q12057	282 aa		4.17	□□□□□ -1.74
ECO1	YFR027W	ADP1	P25371	1049 aa		4.16	□□□□□ -1.74
ECO1	YFR027W	HNT2	P49775	206 aa		4.16	□□□□□ -1.74
ECO1	YFR027W	YGR053C	P53234	283 aa		4.16	□□□□□ -1.74
ECO1	YFR027W	EAF7	P53911	425 aa	Known RBP	4.16	□□□□□ -1.74
ECO1	YFR027W	VPS16	Q03308	798 aa		4.16	□□□□□ -1.74
ECO1	YFR027W	SSY1	Q03770	852 aa		4.16	□□□□□ -1.74
ECO1	YFR027W	TIF35	Q04067	274 aa	Known RBP	4.16	□□□□□ -1.74
ECO1	YFR027W	COQ4	O13525	335 aa		4.15	□□□□□ -1.75
ECO1	YFR027W	TRP2	P00899	507 aa	Known RBP	4.15	□□□□□ -1.75
ECO1	YFR027W	PRO1	P32264	428 aa		4.15	□□□□□ -1.75
ECO1	YFR027W	LYP1	P32487	611 aa		4.15	□□□□□ -1.75
ECO1	YFR027W	POL12	P38121	705 aa	Predicted RBP	4.15	□□□□□ -1.75
ECO1	YFR027W	GPB2	P39717	880 aa		4.15	□□□□□ -1.75
ECO1	YFR027W	ENV11	P53246	860 aa		4.15	□□□□□ -1.75
ECO1	YFR027W	TNA1	P53322	534 aa		4.15	□□□□□ -1.75
ECO1	YFR027W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
ECO1	YFR027W	LPX1	Q12405	387 aa	Known RBP	4.15	□□□□□ -1.75
ECO1	YFR027W	SPO21	Q12411	609 aa		4.15	□□□□□ -1.75
ECO1	YFR027W	RNA1	P11745	407 aa	Known RBP	4.14	□□□□□ -1.75
ECO1	YFR027W	SNF5	P18480	905 aa		4.14	□□□□□ -1.75
ECO1	YFR027W	MLS1	P30952	554 aa		4.14	□□□□□ -1.75
ECO1	YFR027W	YKL222C	P35995	705 aa		4.14	□□□□□ -1.75
ECO1	YFR027W	PTC7	P38797	343 aa		4.14	□□□□□ -1.75
ECO1	YFR027W	MAD1	P40957	749 aa		4.14	□□□□□ -1.75
ECO1	YFR027W	FAA4	P47912	694 aa	Known RBP	4.14	□□□□□ -1.75
ECO1	YFR027W	HOS3	Q02959	697 aa	Known RBP	4.14	□□□□□ -1.75
ECO1	YFR027W	JIP5	Q06214	492 aa	Predicted RBP	4.14	□□□□□ -1.75
ECO1	YFR027W	DFG16	Q99234	619 aa		4.14	□□□□□ -1.75
ECO1	YFR027W	SPT7	P35177	1332 aa		4.14	□□□□□ -1.75
ECO1	YFR027W	HSP78	P33416	811 aa		4.13	□□□□□ -1.75
ECO1	YFR027W	PIK1	P39104	1066 aa		4.13	□□□□□ -1.75
ECO1	YFR027W	GTS1	P40956	396 aa		4.13	□□□□□ -1.75
ECO1	YFR027W	ECL1	P48235	211 aa		4.13	□□□□□ -1.75
ECO1	YFR027W	TYW3	P53177	273 aa		4.13	□□□□□ -1.75
ECO1	YFR027W	FPR4	Q06205	392 aa	Predicted RBP	4.13	□□□□□ -1.75
ECO1	YFR027W	RSC58	Q07979	502 aa		4.13	□□□□□ -1.75
ECO1	YFR027W	RCL1	Q08096	367 aa	Predicted RBP	4.13	□□□□□ -1.75
ECO1	YFR027W	GNT1	Q12096	491 aa		4.13	□□□□□ -1.75
ECO1	YFR027W	XRN1	P22147	1528 aa	Known RBP	4.12	□□□□□ -1.75
ECO1	YFR027W	YER152C	P10356	443 aa		4.12	□□□□□ -1.75
ECO1	YFR027W	CCZ1	P38273	704 aa		4.12	□□□□□ -1.75
ECO1	YFR027W	FUN12	P39730	1002 aa	Known RBP	4.12	□□□□□ -1.75
ECO1	YFR027W	TAF1	P46677	1066 aa		4.12	□□□□□ -1.75
ECO1	YFR027W	GDE1	Q02979	1223 aa		4.12	□□□□□ -1.75
ECO1	YFR027W	ESC8	Q08119	714 aa		4.12	□□□□□ -1.75
ECO1	YFR027W	NBA1	Q08229	501 aa	Known RBP	4.12	□□□□□ -1.75
ECO1	YFR027W	RKM4	Q12504	494 aa		4.12	□□□□□ -1.75
ECO1	YFR027W	YTA7	P40340	1379 aa		4.12	□□□□□ -1.75
ECO1	YFR027W	INO1	P11986	533 aa		4.11	□□□□□ -1.75
ECO1	YFR027W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
ECO1	YFR027W	MCM7	P38132	845 aa		4.11	□□□□□ -1.75
ECO1	YFR027W	OPY1	P38271	328 aa		4.11	□□□□□ -1.75
ECO1	YFR027W	SNF7	P39929	240 aa	Known RBP	4.11	□□□□□ -1.75
ECO1	YFR027W	SPO20	Q04359	397 aa		4.11	□□□□□ -1.75
ECO1	YFR027W	IKI3	Q06706	1349 aa	Known RBP	4.11	□□□□□ -1.75
ECO1	YFR027W	GAS1	P22146	559 aa	Known RBP	4.1	□□□□□ -1.75
ECO1	YFR027W	SPC110	P32380	944 aa		4.1	□□□□□ -1.75
ECO1	YFR027W	TSA1	P34760	196 aa	Known RBP	4.1	□□□□□ -1.75
ECO1	YFR027W	NMD2	P38798	1089 aa	Known RBP	4.1	□□□□□ -1.75
ECO1	YFR027W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
ECO1	YFR027W	CDA2	Q06703	312 aa		4.1	□□□□□ -1.75
ECO1	YFR027W	YPL066W	Q12194	479 aa		4.1	□□□□□ -1.75
ECO1	YFR027W	AGP1	P25376	633 aa		4.09	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 1065.8 ms