RNA–Protein interactions for RNA: YER112W

LSM4, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM4, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM4YER112W AIM26P32858 118 aa5.48□□□□□ -1.53
LSM4YER112W NMD3P38861 518 aaKnown RBP5.48□□□□□ -1.53
LSM4YER112W RTT10Q08924 1013 aa5.48□□□□□ -1.53
LSM4YER112W PIN2Q12057 282 aa5.48□□□□□ -1.53
LSM4YER112W PRE10P21242 288 aaKnown RBP RIP-Chip data5.47□□□□□ -1.53not detected
LSM4YER112W RAD27P26793 382 aa5.47□□□□□ -1.53
LSM4YER112W ABZ1P37254 787 aaPredicted RBP5.46□□□□□ -1.54
LSM4YER112W RDH54P38086 958 aa5.46□□□□□ -1.54
LSM4YER112W YJL045WP47052 634 aa5.46□□□□□ -1.54
LSM4YER112W SIW14P53965 281 aa5.46□□□□□ -1.54
LSM4YER112W VPS16Q03308 798 aa5.46□□□□□ -1.54
LSM4YER112W RKM2Q03942 479 aa5.46□□□□□ -1.54
LSM4YER112W NBA1Q08229 501 aaKnown RBP5.46□□□□□ -1.54
LSM4YER112W TMA46Q12000 345 aaKnown RBP5.46□□□□□ -1.54
LSM4YER112W CDC34P14682 295 aa5.45□□□□□ -1.54
LSM4YER112W ADD66P36040 267 aa5.45□□□□□ -1.54
LSM4YER112W QNS1P38795 714 aaKnown RBP5.45□□□□□ -1.54
LSM4YER112W VPS53P47061 822 aa5.45□□□□□ -1.54
LSM4YER112W UBP3Q01477 912 aaKnown RBP RIP-Chip data5.45□□□□□ -1.54 RIP-Chip
LSM4YER112W RSC58Q07979 502 aa5.45□□□□□ -1.54
LSM4YER112W GCR1P07261 785 aa5.44□□□□□ -1.54
LSM4YER112W YSC84P32793 468 aa5.44□□□□□ -1.54
LSM4YER112W SHM2P37291 469 aaKnown RBP5.44□□□□□ -1.54
LSM4YER112W CWC24P53769 259 aa5.44□□□□□ -1.54
LSM4YER112W YDR132CQ03900 495 aa5.44□□□□□ -1.54
LSM4YER112W EST2Q06163 884 aa5.44□□□□□ -1.54
LSM4YER112W SPS1P08458 490 aa5.43□□□□□ -1.54
LSM4YER112W CTS1P29029 562 aa5.43□□□□□ -1.54
LSM4YER112W KRI1P42846 591 aaKnown RBP5.43□□□□□ -1.54
LSM4YER112W YNR063WP53749 607 aa5.43□□□□□ -1.54
LSM4YER112W YOR352WQ08816 343 aa5.43□□□□□ -1.54
LSM4YER112W TUB2P02557 457 aaKnown RBP5.42□□□□□ -1.54
LSM4YER112W GNP1P48813 663 aa5.42□□□□□ -1.54
LSM4YER112W HNT2P49775 206 aa5.42□□□□□ -1.54
LSM4YER112W DED1P06634 604 aaKnown RBP5.41□□□□□ -1.54
LSM4YER112W HEM13P11353 328 aaKnown RBP5.41□□□□□ -1.54
LSM4YER112W SGD1Q06132 899 aa5.41□□□□□ -1.54
LSM4YER112W COQ4O13525 335 aa5.4□□□□□ -1.54
LSM4YER112W DUT1P33317 147 aa5.4□□□□□ -1.54
LSM4YER112W CCZ1P38273 704 aa5.4□□□□□ -1.54
LSM4YER112W TAT2P38967 592 aa5.4□□□□□ -1.54
LSM4YER112W VAC8P39968 578 aa5.4□□□□□ -1.54
LSM4YER112W ALD6P54115 500 aaKnown RBP5.4□□□□□ -1.54
LSM4YER112W ROD1Q02805 837 aa5.4□□□□□ -1.54
LSM4YER112W GDE1Q02979 1223 aa5.4□□□□□ -1.54
LSM4YER112W MKK2P32491 506 aa5.39□□□□□ -1.55
LSM4YER112W LAM1P38851 1228 aa5.39□□□□□ -1.55
LSM4YER112W MPT5P39016 859 aaKnown RBP RIP-Chip data5.39□□□□□ -1.55 RIP-Chip
LSM4YER112W MEF2P39677 819 aa5.39□□□□□ -1.55
LSM4YER112W HXT13P39924 564 aa5.39□□□□□ -1.55
LSM4YER112W HXT17P53631 564 aa5.39□□□□□ -1.55
LSM4YER112W HXT15P54854 567 aa5.39□□□□□ -1.55
LSM4YER112W GCN5Q03330 439 aa5.39□□□□□ -1.55
LSM4YER112W SPO20Q04359 397 aa5.39□□□□□ -1.55
LSM4YER112W PNS1Q12412 539 aa5.39□□□□□ -1.55
LSM4YER112W SYP1P25623 870 aaKnown RBP5.38□□□□□ -1.55
LSM4YER112W LYP1P32487 611 aa5.38□□□□□ -1.55
LSM4YER112W BAP2P38084 609 aa5.38□□□□□ -1.55
LSM4YER112W SNF7P39929 240 aaKnown RBP5.38□□□□□ -1.55
LSM4YER112W FAA4P47912 694 aaKnown RBP5.38□□□□□ -1.55
LSM4YER112W SPT20P50875 604 aa5.38□□□□□ -1.55
LSM4YER112W YGR053CP53234 283 aa5.38□□□□□ -1.55
LSM4YER112W SEC26P41810 973 aaKnown RBP5.37□□□□□ -1.55
LSM4YER112W CNN1P43618 361 aa5.37□□□□□ -1.55
LSM4YER112W PTC5Q12511 572 aa5.37□□□□□ -1.55
LSM4YER112W TRP2P00899 507 aaKnown RBP5.36□□□□□ -1.55
LSM4YER112W DBP5P20449 482 aaKnown RBP5.36□□□□□ -1.55
LSM4YER112W DOM34P33309 386 aa5.36□□□□□ -1.55
LSM4YER112W RER2P35196 286 aa5.36□□□□□ -1.55
LSM4YER112W ALG3P38179 458 aa5.36□□□□□ -1.55
LSM4YER112W RGD1P38339 666 aa5.36□□□□□ -1.55
LSM4YER112W TYW3P53177 273 aa5.36□□□□□ -1.55
LSM4YER112W TNA1P53322 534 aa5.36□□□□□ -1.55
LSM4YER112W EEB1Q02891 456 aa5.36□□□□□ -1.55
LSM4YER112W NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.36□□□□□ -1.55not detected
LSM4YER112W RCL1Q08096 367 aaPredicted RBP5.36□□□□□ -1.55
LSM4YER112W FAL1Q12099 399 aaKnown RBP5.36□□□□□ -1.55
LSM4YER112W WRS1Q12109 432 aaKnown RBP5.36□□□□□ -1.55
LSM4YER112W TAD3Q9URQ3 322 aa5.36□□□□□ -1.55
LSM4YER112W CYC1P00044 109 aaPredicted RBP5.35□□□□□ -1.55
LSM4YER112W PUF4P25339 888 aaKnown RBP RIP-Chip data5.35□□□□□ -1.55not detected
LSM4YER112W KIP1P28742 1111 aa5.35□□□□□ -1.55
LSM4YER112W AFG2P32794 780 aa5.35□□□□□ -1.55
LSM4YER112W RAT1Q02792 1006 aaKnown RBP5.35□□□□□ -1.55
LSM4YER112W HOS3Q02959 697 aaKnown RBP5.35□□□□□ -1.55
LSM4YER112W YPL260WQ08977 551 aa5.35□□□□□ -1.55
LSM4YER112W PIK1P39104 1066 aa5.34□□□□□ -1.55
LSM4YER112W NNF1P47149 201 aa5.34□□□□□ -1.55
LSM4YER112W RSB1Q08417 382 aa5.34□□□□□ -1.55
LSM4YER112W SSF2Q12153 453 aaPredicted RBP5.34□□□□□ -1.55
LSM4YER112W MCM7P38132 845 aa5.33□□□□□ -1.56
LSM4YER112W RPN3P40016 523 aaKnown RBP5.33□□□□□ -1.56
LSM4YER112W YJL049WP47048 450 aa5.33□□□□□ -1.56
LSM4YER112W TIF35Q04067 274 aaKnown RBP5.33□□□□□ -1.56
LSM4YER112W OPI10Q08202 246 aa5.33□□□□□ -1.56
LSM4YER112W RKM4Q12504 494 aa5.33□□□□□ -1.56
LSM4YER112W INO1P11986 533 aa5.32□□□□□ -1.56
LSM4YER112W BAS1P22035 811 aa5.32□□□□□ -1.56
LSM4YER112W TRM2P33753 639 aa5.32□□□□□ -1.56
LSM4YER112W DUS4Q06063 367 aa5.32□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 51.5 ms