RNA–Protein interactions for RNA: YDR218C

SPR28, Transcript of Sporulation-specific homolog of the CDC3/10/11/12 family of genes, yeast

Gene SPR28, Length 1,272 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPR28	YDR218C	PWP2	P25635	923 aa	Known RBP	5.68	□□□□□ -1.5
SPR28	YDR218C	SEC6	P32844	805 aa		5.68	□□□□□ -1.5
SPR28	YDR218C	RPT1	P33299	467 aa	Known RBP	5.68	□□□□□ -1.5
SPR28	YDR218C	NNK1	P36003	928 aa		5.68	□□□□□ -1.5
SPR28	YDR218C	AVO1	Q08236	1176 aa		5.68	□□□□□ -1.5
SPR28	YDR218C	PUS7	Q08647	676 aa	Known RBP	5.68	□□□□□ -1.5
SPR28	YDR218C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	5.67	□□□□□ -1.5	not detected
SPR28	YDR218C	TOA1	P32773	286 aa		5.67	□□□□□ -1.5
SPR28	YDR218C	PET112	P33893	541 aa		5.67	□□□□□ -1.5
SPR28	YDR218C	PTC7	P38797	343 aa		5.67	□□□□□ -1.5
SPR28	YDR218C	NMD3	P38861	518 aa	Known RBP	5.67	□□□□□ -1.5
SPR28	YDR218C	IES1	P43579	692 aa		5.67	□□□□□ -1.5
SPR28	YDR218C	SAM37	P50110	327 aa		5.67	□□□□□ -1.5
SPR28	YDR218C	PRP43	P53131	767 aa	Known RBP	5.67	□□□□□ -1.5
SPR28	YDR218C	NOG1	Q02892	647 aa	Known RBP	5.67	□□□□□ -1.5
SPR28	YDR218C	GIR2	Q03768	265 aa	Predicted RBP	5.67	□□□□□ -1.5
SPR28	YDR218C	SPR28	Q04921	423 aa		5.67	□□□□□ -1.5
SPR28	YDR218C	YCS4	Q06156	1176 aa		5.67	□□□□□ -1.5
SPR28	YDR218C	TOS4	Q06266	489 aa		5.67	□□□□□ -1.5
SPR28	YDR218C	NKP1	Q12493	238 aa		5.67	□□□□□ -1.5
SPR28	YDR218C	RPA135	P22138	1203 aa	Known RBP	5.66	□□□□□ -1.5
SPR28	YDR218C	GCD6	P32501	712 aa	Known RBP	5.66	□□□□□ -1.5
SPR28	YDR218C	MNR2	P35724	969 aa		5.66	□□□□□ -1.5
SPR28	YDR218C	YKL077W	P36081	392 aa		5.66	□□□□□ -1.5
SPR28	YDR218C	CRP1	P38845	465 aa	Known RBP	5.66	□□□□□ -1.5
SPR28	YDR218C	UBP12	P39538	1254 aa		5.66	□□□□□ -1.5
SPR28	YDR218C	YDL177C	Q12257	170 aa		5.66	□□□□□ -1.5
SPR28	YDR218C	PHO8	P11491	566 aa		5.65	□□□□□ -1.5
SPR28	YDR218C	MRC1	P25588	1096 aa		5.65	□□□□□ -1.5
SPR28	YDR218C	MCM2	P29469	868 aa		5.65	□□□□□ -1.5
SPR28	YDR218C	THI80	P35202	319 aa		5.65	□□□□□ -1.5
SPR28	YDR218C	MPE1	P35728	441 aa	Known RBP	5.65	□□□□□ -1.5
SPR28	YDR218C	VPS24	P36095	224 aa	Known RBP	5.65	□□□□□ -1.5
SPR28	YDR218C	NUP82	P40368	713 aa		5.65	□□□□□ -1.5
SPR28	YDR218C	ESF2	P53743	316 aa	Known RBP	5.65	□□□□□ -1.5
SPR28	YDR218C	DNM1	P54861	757 aa		5.65	□□□□□ -1.5
SPR28	YDR218C	TPP1	Q03796	238 aa		5.65	□□□□□ -1.5
SPR28	YDR218C	UTP5	Q04177	643 aa	Known RBP	5.65	□□□□□ -1.5
SPR28	YDR218C	COG4	Q06096	861 aa		5.65	□□□□□ -1.5
SPR28	YDR218C	YLR125W	Q12138	136 aa		5.65	□□□□□ -1.5
SPR28	YDR218C	HIF1	Q12373	385 aa		5.65	□□□□□ -1.5
SPR28	YDR218C	THS1	P04801	734 aa	Known RBP	5.64	□□□□□ -1.51
SPR28	YDR218C	PHO4	P07270	312 aa	Known RBP	5.64	□□□□□ -1.51
SPR28	YDR218C	SRM1	P21827	482 aa		5.64	□□□□□ -1.51
SPR28	YDR218C	MSH3	P25336	1018 aa		5.64	□□□□□ -1.51
SPR28	YDR218C	PRP40	P33203	583 aa	Known RBP	5.64	□□□□□ -1.51
SPR28	YDR218C	CIC1	P38779	376 aa	Known RBP	5.64	□□□□□ -1.51
SPR28	YDR218C	YAR028W	P39548	234 aa		5.64	□□□□□ -1.51
SPR28	YDR218C	GTS1	P40956	396 aa		5.64	□□□□□ -1.51
SPR28	YDR218C	KRI1	P42846	591 aa	Known RBP	5.64	□□□□□ -1.51
SPR28	YDR218C	TAF1	P46677	1066 aa		5.64	□□□□□ -1.51
SPR28	YDR218C	ENT2	Q05785	613 aa		5.64	□□□□□ -1.51
SPR28	YDR218C	RAD2	P07276	1031 aa		5.63	□□□□□ -1.51
SPR28	YDR218C	TRX2	P22803	104 aa	Known RBP	5.63	□□□□□ -1.51
SPR28	YDR218C	YCR015C	P25616	317 aa		5.63	□□□□□ -1.51
SPR28	YDR218C	HUL5	P53119	910 aa		5.63	□□□□□ -1.51
SPR28	YDR218C	YLR257W	Q06146	321 aa	Known RBP	5.63	□□□□□ -1.51
SPR28	YDR218C	OXR1	Q08952	273 aa		5.63	□□□□□ -1.51
SPR28	YDR218C	SAM35	P14693	329 aa		5.62	□□□□□ -1.51
SPR28	YDR218C	RPN12	P32496	274 aa		5.62	□□□□□ -1.51
SPR28	YDR218C	SHU2	P38957	223 aa		5.62	□□□□□ -1.51
SPR28	YDR218C	CHZ1	P40019	153 aa	Predicted RBP	5.62	□□□□□ -1.51
SPR28	YDR218C	XKS1	P42826	600 aa		5.62	□□□□□ -1.51
SPR28	YDR218C	DAK2	P43550	591 aa		5.62	□□□□□ -1.51
SPR28	YDR218C	TIM54	P47045	478 aa		5.62	□□□□□ -1.51
SPR28	YDR218C	PEX13	P80667	386 aa		5.62	□□□□□ -1.51
SPR28	YDR218C	ESC8	Q08119	714 aa		5.62	□□□□□ -1.51
SPR28	YDR218C	HEM13	P11353	328 aa	Known RBP	5.61	□□□□□ -1.51
SPR28	YDR218C	RET1	P22276	1149 aa	Known RBP	5.61	□□□□□ -1.51
SPR28	YDR218C	GRX1	P25373	110 aa	Known RBP	5.61	□□□□□ -1.51
SPR28	YDR218C	THI4	P32318	326 aa		5.61	□□□□□ -1.51
SPR28	YDR218C	FUI1	P38196	639 aa		5.61	□□□□□ -1.51
SPR28	YDR218C	RPS26A	P39938	119 aa	Known RBP	5.61	□□□□□ -1.51
SPR28	YDR218C	RPS26B	P39939	119 aa	Known RBP	5.61	□□□□□ -1.51
SPR28	YDR218C	MTR4	P47047	1073 aa	Known RBP	5.61	□□□□□ -1.51
SPR28	YDR218C	ULP1	Q02724	621 aa		5.61	□□□□□ -1.51
SPR28	YDR218C	NAN1	Q02931	896 aa	Known RBP	5.61	□□□□□ -1.51
SPR28	YDR218C	SPO20	Q04359	397 aa		5.61	□□□□□ -1.51
SPR28	YDR218C	RSA3	Q05942	220 aa	Known RBP	5.61	□□□□□ -1.51
SPR28	YDR218C	SFP1	P32432	683 aa		5.6	□□□□□ -1.51
SPR28	YDR218C	FOL1	P53848	824 aa		5.6	□□□□□ -1.51
SPR28	YDR218C	RAD4	P14736	754 aa		5.59	□□□□□ -1.51
SPR28	YDR218C	TIM23	P32897	222 aa		5.59	□□□□□ -1.51
SPR28	YDR218C	BLI1	P35727	113 aa		5.59	□□□□□ -1.51
SPR28	YDR218C	AIM3	P38266	947 aa	Known RBP	5.59	□□□□□ -1.51
SPR28	YDR218C	DAL4	Q04895	635 aa		5.59	□□□□□ -1.51
SPR28	YDR218C	NYV1	Q12255	253 aa		5.59	□□□□□ -1.51
SPR28	YDR218C	PRP6	P19735	899 aa	Predicted RBP	5.58	□□□□□ -1.52
SPR28	YDR218C	RAD27	P26793	382 aa		5.58	□□□□□ -1.52
SPR28	YDR218C	RPS0A	P32905	252 aa	Known RBP	5.58	□□□□□ -1.52
SPR28	YDR218C	YKL222C	P35995	705 aa		5.58	□□□□□ -1.52
SPR28	YDR218C	RDH54	P38086	958 aa		5.58	□□□□□ -1.52
SPR28	YDR218C	ENP1	P38333	483 aa	Known RBP	5.58	□□□□□ -1.52
SPR28	YDR218C	PAF1	P38351	445 aa		5.58	□□□□□ -1.52
SPR28	YDR218C	YHL012W	P38709	493 aa		5.58	□□□□□ -1.52
SPR28	YDR218C	ETP1	P38748	585 aa	Known RBP	5.58	□□□□□ -1.52
SPR28	YDR218C	YJL045W	P47052	634 aa		5.58	□□□□□ -1.52
SPR28	YDR218C	RSM26	P47141	266 aa		5.58	□□□□□ -1.52
SPR28	YDR218C	YGR122W	P53272	402 aa		5.58	□□□□□ -1.52
SPR28	YDR218C	YNR063W	P53749	607 aa		5.58	□□□□□ -1.52

Retrieved 100 of 5,963 RNA–protein pairs in 227.5 ms