RNA–Protein interactions for RNA: YDR171W

HSP42, Transcript of Small heat shock protein (sHSP) with chaperone activity, yeastyeast

Gene HSP42, Length 1,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSP42YDR171W SEA4P38164 1038 aa5.65□□□□□ -1.5
HSP42YDR171W RGD1P38339 666 aa5.65□□□□□ -1.5
HSP42YDR171W RCM1P53972 490 aa5.65□□□□□ -1.5
HSP42YDR171W YPL066WQ12194 479 aa5.65□□□□□ -1.5
HSP42YDR171W YVC1Q12324 675 aa5.65□□□□□ -1.5
HSP42YDR171W YGL176CP46945 554 aa5.64□□□□□ -1.51
HSP42YDR171W HNT2P49775 206 aa5.64□□□□□ -1.51
HSP42YDR171W TDA5Q06417 326 aaKnown RBP5.64□□□□□ -1.51
HSP42YDR171W YPL260WQ08977 551 aa5.64□□□□□ -1.51
HSP42YDR171W TRP3P00937 484 aa5.63□□□□□ -1.51
HSP42YDR171W YER152CP10356 443 aa5.63□□□□□ -1.51
HSP42YDR171W MSB1P21339 1137 aaKnown RBP5.63□□□□□ -1.51
HSP42YDR171W YKL107WP34251 309 aa5.63□□□□□ -1.51
HSP42YDR171W SPT6P23615 1451 aaKnown RBP5.63□□□□□ -1.51
HSP42YDR171W UFD4P33202 1483 aa5.63□□□□□ -1.51
HSP42YDR171W THO2P53552 1597 aaKnown RBP5.63□□□□□ -1.51
HSP42YDR171W CYC7P00045 113 aa5.62□□□□□ -1.51
HSP42YDR171W GCD1P09032 578 aaPredicted RBP5.62□□□□□ -1.51
HSP42YDR171W SPF1P39986 1215 aaKnown RBP5.62□□□□□ -1.51
HSP42YDR171W YOR059CQ08448 450 aaKnown RBP5.62□□□□□ -1.51
HSP42YDR171W RKM4Q12504 494 aa5.62□□□□□ -1.51
HSP42YDR171W SBP1P10080 294 aaKnown RBP5.61□□□□□ -1.51
HSP42YDR171W GRX1P25373 110 aaKnown RBP5.61□□□□□ -1.51
HSP42YDR171W YSC84P32793 468 aa5.61□□□□□ -1.51
HSP42YDR171W YKR073CP36153 106 aa5.61□□□□□ -1.51
HSP42YDR171W YHL012WP38709 493 aa5.61□□□□□ -1.51
HSP42YDR171W OYE3P41816 400 aaPredicted RBP5.61□□□□□ -1.51
HSP42YDR171W YFL054CP43549 646 aa5.61□□□□□ -1.51
HSP42YDR171W AGP1P25376 633 aa5.6□□□□□ -1.51
HSP42YDR171W ALO1P54783 526 aaKnown RBP5.6□□□□□ -1.51
HSP42YDR171W SDH1Q00711 640 aa5.6□□□□□ -1.51
HSP42YDR171W RCL1Q08096 367 aaPredicted RBP5.6□□□□□ -1.51
HSP42YDR171W GNT1Q12096 491 aa5.6□□□□□ -1.51
HSP42YDR171W SIN3P22579 1536 aa5.59□□□□□ -1.51
HSP42YDR171W SAM35P14693 329 aa5.59□□□□□ -1.51
HSP42YDR171W SBA1P28707 216 aaKnown RBP5.59□□□□□ -1.51
HSP42YDR171W PRO1P32264 428 aa5.59□□□□□ -1.51
HSP42YDR171W VBA5P36172 582 aa5.59□□□□□ -1.51
HSP42YDR171W TOS1P38288 455 aa5.59□□□□□ -1.51
HSP42YDR171W HOS3Q02959 697 aaKnown RBP5.59□□□□□ -1.51
HSP42YDR171W SPP382Q06411 708 aaPredicted RBP5.59□□□□□ -1.51
HSP42YDR171W MED7Q08278 222 aa5.59□□□□□ -1.51
HSP42YDR171W TRE1Q08919 783 aa5.59□□□□□ -1.51
HSP42YDR171W NSI1Q12457 570 aa5.59□□□□□ -1.51
HSP42YDR171W HIR3P47171 1648 aa5.59□□□□□ -1.52
HSP42YDR171W COQ4O13525 335 aa5.58□□□□□ -1.52
HSP42YDR171W PEX7P39108 375 aa5.58□□□□□ -1.52
HSP42YDR171W MBP1P39678 833 aa5.58□□□□□ -1.52
HSP42YDR171W MXR1P40029 184 aa5.58□□□□□ -1.52
HSP42YDR171W SIP5P40210 489 aaKnown RBP5.58□□□□□ -1.52
HSP42YDR171W NNF1P47149 201 aa5.58□□□□□ -1.52
HSP42YDR171W TNA1P53322 534 aa5.58□□□□□ -1.52
HSP42YDR171W RPL11AP0C0W9 174 aaKnown RBP5.57□□□□□ -1.52
HSP42YDR171W DBP2P24783 546 aaKnown RBP5.57□□□□□ -1.52
HSP42YDR171W STE5P32917 917 aa5.57□□□□□ -1.52
HSP42YDR171W YBR184WP38299 523 aa5.57□□□□□ -1.52
HSP42YDR171W PTC7P38797 343 aa5.57□□□□□ -1.52
HSP42YDR171W TAT2P38967 592 aa5.57□□□□□ -1.52
HSP42YDR171W RPN3P40016 523 aaKnown RBP5.57□□□□□ -1.52
HSP42YDR171W GTS1P40956 396 aa5.57□□□□□ -1.52
HSP42YDR171W KRI1P42846 591 aaKnown RBP5.57□□□□□ -1.52
HSP42YDR171W SSY1Q03770 852 aa5.57□□□□□ -1.52
HSP42YDR171W SHE9Q04172 456 aa5.57□□□□□ -1.52
HSP42YDR171W RPL11BQ3E757 174 aaPredicted RBP5.57□□□□□ -1.52
HSP42YDR171W SSK2P53599 1579 aa5.56□□□□□ -1.52
HSP42YDR171W RAD4P14736 754 aa5.56□□□□□ -1.52
HSP42YDR171W PIN4P34217 668 aaKnown RBP RIP-Chip data5.56□□□□□ -1.52not detected
HSP42YDR171W OCA5P38738 679 aa5.56□□□□□ -1.52
HSP42YDR171W UBP3Q01477 912 aaKnown RBP RIP-Chip data5.56□□□□□ -1.52not detected
HSP42YDR171W NAN1Q02931 896 aaKnown RBP5.56□□□□□ -1.52
HSP42YDR171W REV3P14284 1504 aa5.56□□□□□ -1.52
HSP42YDR171W SPP41P38904 1435 aa5.56□□□□□ -1.52
HSP42YDR171W SNF5P18480 905 aa5.55□□□□□ -1.52
HSP42YDR171W AIM26P32858 118 aa5.55□□□□□ -1.52
HSP42YDR171W MDL2P33311 773 aa5.55□□□□□ -1.52
HSP42YDR171W CCZ1P38273 704 aa5.55□□□□□ -1.52
HSP42YDR171W ADP1P25371 1049 aa5.54□□□□□ -1.52
HSP42YDR171W LIP5P32875 414 aa5.54□□□□□ -1.52
HSP42YDR171W MRP8P35719 219 aa5.54□□□□□ -1.52
HSP42YDR171W OMA1P36163 345 aa5.54□□□□□ -1.52
HSP42YDR171W BAP2P38084 609 aa5.54□□□□□ -1.52
HSP42YDR171W PNT1P38969 423 aa5.54□□□□□ -1.52
HSP42YDR171W SNF7P39929 240 aaKnown RBP5.54□□□□□ -1.52
HSP42YDR171W TIM54P47045 478 aa5.54□□□□□ -1.52
HSP42YDR171W YOL098CQ12496 1037 aa5.54□□□□□ -1.52
HSP42YDR171W MYO2P19524 1574 aaKnown RBP5.54□□□□□ -1.52
HSP42YDR171W STU1P38198 1513 aa5.53□□□□□ -1.52
HSP42YDR171W SRO9P25567 434 aaKnown RBP5.53□□□□□ -1.52
HSP42YDR171W UGA2P38067 497 aa5.53□□□□□ -1.52
HSP42YDR171W IRR1P40541 1150 aa5.53□□□□□ -1.52
HSP42YDR171W IOC3P43596 787 aa5.53□□□□□ -1.52
HSP42YDR171W RSC58Q07979 502 aa5.53□□□□□ -1.52
HSP42YDR171W NBA1Q08229 501 aaKnown RBP5.53□□□□□ -1.52
HSP42YDR171W ACM1Q08981 209 aa5.53□□□□□ -1.52
HSP42YDR171W TRM732Q03496 1420 aa5.52□□□□□ -1.53
HSP42YDR171W PIK1P39104 1066 aa5.52□□□□□ -1.53
HSP42YDR171W YJL049WP47048 450 aa5.52□□□□□ -1.53
HSP42YDR171W CTH1P47976 325 aa5.52□□□□□ -1.53
HSP42YDR171W RSB1Q08417 382 aa5.52□□□□□ -1.53
HSP42YDR171W CDC53Q12018 815 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms