RNA–Protein interactions for RNA: YDR001C

NTH1, Transcript of Neutral trehalase, degrades trehalose, yeast

Gene NTH1, Length 2,256 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NTH1	YDR001C	UBX5	Q06682	500 aa		4.92	□□□□□ -1.62
NTH1	YDR001C	NUP170	P38181	1502 aa		4.92	□□□□□ -1.62
NTH1	YDR001C	YKL107W	P34251	309 aa		4.92	□□□□□ -1.62
NTH1	YDR001C	SIP5	P40210	489 aa	Known RBP	4.92	□□□□□ -1.62
NTH1	YDR001C	KRI1	P42846	591 aa	Known RBP	4.92	□□□□□ -1.62
NTH1	YDR001C	YLR125W	Q12138	136 aa		4.92	□□□□□ -1.62
NTH1	YDR001C	ARE1	P25628	610 aa		4.91	□□□□□ -1.62
NTH1	YDR001C	MLS1	P30952	554 aa		4.91	□□□□□ -1.62
NTH1	YDR001C	MCM7	P38132	845 aa		4.91	□□□□□ -1.62
NTH1	YDR001C	BET3	P36149	193 aa		4.9	□□□□□ -1.62
NTH1	YDR001C	ALG14	P38242	237 aa		4.9	□□□□□ -1.62
NTH1	YDR001C	GGA2	P38817	585 aa	Known RBP	4.9	□□□□□ -1.62
NTH1	YDR001C	ELG1	Q12050	791 aa		4.9	□□□□□ -1.62
NTH1	YDR001C	RTA1	P53047	317 aa		4.9	□□□□□ -1.63
NTH1	YDR001C	YGR045C	P53229	120 aa		4.9	□□□□□ -1.63
NTH1	YDR001C	POB3	Q04636	552 aa	Known RBP	4.9	□□□□□ -1.63
NTH1	YDR001C	PTC5	Q12511	572 aa		4.9	□□□□□ -1.63
NTH1	YDR001C	SAC7	P17121	654 aa		4.89	□□□□□ -1.63
NTH1	YDR001C	THI4	P32318	326 aa		4.89	□□□□□ -1.63
NTH1	YDR001C	YAR028W	P39548	234 aa		4.89	□□□□□ -1.63
NTH1	YDR001C	ALR2	P43553	858 aa		4.89	□□□□□ -1.63
NTH1	YDR001C	JJJ3	P47138	172 aa		4.89	□□□□□ -1.63
NTH1	YDR001C	GAL11	P19659	1081 aa		4.89	□□□□□ -1.63
NTH1	YDR001C	RGD1	P38339	666 aa		4.89	□□□□□ -1.63
NTH1	YDR001C	YJR142W	P47173	342 aa		4.89	□□□□□ -1.63
NTH1	YDR001C	CWC22	P53333	577 aa	Known RBP	4.89	□□□□□ -1.63
NTH1	YDR001C	EAF7	P53911	425 aa	Known RBP	4.89	□□□□□ -1.63
NTH1	YDR001C	MYO2	P19524	1574 aa	Known RBP	4.89	□□□□□ -1.63
NTH1	YDR001C	HBS1	P32769	611 aa	Known RBP	4.88	□□□□□ -1.63
NTH1	YDR001C	HUL4	P40985	892 aa		4.88	□□□□□ -1.63
NTH1	YDR001C	PDR10	P51533	1564 aa		4.88	□□□□□ -1.63
NTH1	YDR001C	ATG14	P38270	344 aa		4.88	□□□□□ -1.63
NTH1	YDR001C	OPY1	P38271	328 aa		4.88	□□□□□ -1.63
NTH1	YDR001C	HNT2	P49775	206 aa		4.88	□□□□□ -1.63
NTH1	YDR001C	KIP3	P53086	805 aa	Known RBP	4.88	□□□□□ -1.63
NTH1	YDR001C	YGR130C	P53278	816 aa		4.88	□□□□□ -1.63
NTH1	YDR001C	LAP2	Q10740	671 aa		4.88	□□□□□ -1.63
NTH1	YDR001C	NHA1	Q99271	985 aa		4.88	□□□□□ -1.63
NTH1	YDR001C	SRB8	P25648	1427 aa		4.87	□□□□□ -1.63
NTH1	YDR001C	BUD4	P47136	1447 aa		4.87	□□□□□ -1.63
NTH1	YDR001C	DBP2	P24783	546 aa	Known RBP	4.87	□□□□□ -1.63
NTH1	YDR001C	MAE1	P36013	669 aa	Known RBP	4.87	□□□□□ -1.63
NTH1	YDR001C	NCE103	P53615	221 aa		4.87	□□□□□ -1.63
NTH1	YDR001C	ELA1	P53861	379 aa	Predicted RBP	4.87	□□□□□ -1.63
NTH1	YDR001C	YMR074C	Q04773	145 aa		4.87	□□□□□ -1.63
NTH1	YDR001C	HPF1	Q05164	967 aa		4.87	□□□□□ -1.63
NTH1	YDR001C	AVO1	Q08236	1176 aa		4.87	□□□□□ -1.63
NTH1	YDR001C	GNT1	Q12096	491 aa		4.87	□□□□□ -1.63
NTH1	YDR001C	YER152C	P10356	443 aa		4.86	□□□□□ -1.63
NTH1	YDR001C	PRP9	P19736	530 aa	Known RBP	4.86	□□□□□ -1.63
NTH1	YDR001C	QNS1	P38795	714 aa	Known RBP	4.86	□□□□□ -1.63
NTH1	YDR001C	MAL11	P53048	616 aa		4.86	□□□□□ -1.63
NTH1	YDR001C	YLL054C	Q12244	843 aa		4.86	□□□□□ -1.63
NTH1	YDR001C	HBN1	Q96VH4	193 aa		4.86	□□□□□ -1.63
NTH1	YDR001C	TOP2	P06786	1428 aa	Known RBP	4.86	□□□□□ -1.63
NTH1	YDR001C	MLP2	P40457	1679 aa		4.86	□□□□□ -1.63
NTH1	YDR001C	TOP3	P13099	656 aa		4.86	□□□□□ -1.63
NTH1	YDR001C	TSR4	P25040	408 aa		4.86	□□□□□ -1.63
NTH1	YDR001C	VPS53	P47061	822 aa		4.86	□□□□□ -1.63
NTH1	YDR001C	DSE4	P53753	1117 aa		4.86	□□□□□ -1.63
NTH1	YDR001C	DNM1	P54861	757 aa		4.86	□□□□□ -1.63
NTH1	YDR001C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
NTH1	YDR001C	RSA3	Q05942	220 aa	Known RBP	4.86	□□□□□ -1.63
NTH1	YDR001C	RET1	P22276	1149 aa	Known RBP	4.85	□□□□□ -1.63
NTH1	YDR001C	GAR1	P28007	205 aa	Known RBP	4.85	□□□□□ -1.63
NTH1	YDR001C	GRX4	P32642	244 aa		4.85	□□□□□ -1.63
NTH1	YDR001C	SNF7	P39929	240 aa	Known RBP	4.85	□□□□□ -1.63
NTH1	YDR001C	UTP14	Q04500	899 aa	Known RBP	4.85	□□□□□ -1.63
NTH1	YDR001C	YOR223W	Q12015	292 aa		4.85	□□□□□ -1.63
NTH1	YDR001C	YGR161W-C	Q3E744	92 aa		4.85	□□□□□ -1.63
NTH1	YDR001C	THO2	P53552	1597 aa	Known RBP	4.85	□□□□□ -1.63
NTH1	YDR001C	STU1	P38198	1513 aa		4.85	□□□□□ -1.63
NTH1	YDR001C	YLR419W	Q06698	1435 aa	Known RBP	4.85	□□□□□ -1.63
NTH1	YDR001C	MSH2	P25847	964 aa		4.85	□□□□□ -1.63
NTH1	YDR001C	KIP1	P28742	1111 aa		4.85	□□□□□ -1.63
NTH1	YDR001C	PNT1	P38969	423 aa		4.85	□□□□□ -1.63
NTH1	YDR001C	NUG1	P40010	520 aa	Known RBP	4.85	□□□□□ -1.63
NTH1	YDR001C	CFT1	Q06632	1357 aa	Known RBP	4.84	□□□□□ -1.63
NTH1	YDR001C	RPL11A	P0C0W9	174 aa	Known RBP	4.84	□□□□□ -1.63
NTH1	YDR001C	NFS1	P25374	497 aa		4.84	□□□□□ -1.63
NTH1	YDR001C	DOT1	Q04089	582 aa	Known RBP	4.84	□□□□□ -1.63
NTH1	YDR001C	RPL11B	Q3E757	174 aa	Predicted RBP	4.84	□□□□□ -1.63
NTH1	YDR001C	NOP14	Q99207	810 aa	Known RBP	4.84	□□□□□ -1.63
NTH1	YDR001C	YBR284W	P38150	797 aa		4.84	□□□□□ -1.64
NTH1	YDR001C	RRM3	P38766	723 aa		4.84	□□□□□ -1.64
NTH1	YDR001C	NMD3	P38861	518 aa	Known RBP	4.84	□□□□□ -1.64
NTH1	YDR001C	RIX1	P38883	763 aa	Predicted RBP	4.84	□□□□□ -1.64
NTH1	YDR001C	CCC2	P38995	1004 aa		4.84	□□□□□ -1.64
NTH1	YDR001C	MXR1	P40029	184 aa		4.84	□□□□□ -1.64
NTH1	YDR001C	HSV2	P50079	448 aa	Predicted RBP	4.84	□□□□□ -1.64
NTH1	YDR001C	YRB30	P53107	440 aa	Predicted RBP	4.84	□□□□□ -1.64
NTH1	YDR001C	YDL124W	Q07551	312 aa	Known RBP	4.84	□□□□□ -1.64
NTH1	YDR001C	NTG2	Q08214	380 aa		4.84	□□□□□ -1.64
NTH1	YDR001C	YPL260W	Q08977	551 aa		4.84	□□□□□ -1.64
NTH1	YDR001C	TY1A-NL1	Q12391	440 aa	Known RBP	4.84	□□□□□ -1.64
NTH1	YDR001C	DPH6	Q12429	685 aa		4.84	□□□□□ -1.64
NTH1	YDR001C	SSM4	P40318	1319 aa		4.83	□□□□□ -1.64
NTH1	YDR001C	MSH4	P40965	878 aa	Predicted RBP	4.83	□□□□□ -1.64
NTH1	YDR001C	HSE1	P38753	452 aa		4.83	□□□□□ -1.64
NTH1	YDR001C	GDH3	P39708	457 aa		4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms