RNA–Protein interactions for RNA: YCR065W

HCM1, Transcript of Forkhead transcription factor, yeast

Gene HCM1, Length 1,695 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HCM1	YCR065W	SPT7	P35177	1332 aa		4.87	□□□□□ -1.63
HCM1	YCR065W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
HCM1	YCR065W	RSC6	P25632	483 aa		4.86	□□□□□ -1.63
HCM1	YCR065W	DUT1	P33317	147 aa		4.86	□□□□□ -1.63
HCM1	YCR065W	GPT2	P36148	743 aa		4.86	□□□□□ -1.63
HCM1	YCR065W	FUN12	P39730	1002 aa	Known RBP	4.86	□□□□□ -1.63
HCM1	YCR065W	CCT8	P47079	568 aa	Known RBP	4.86	□□□□□ -1.63
HCM1	YCR065W	SVL3	Q03088	825 aa	Known RBP	4.86	□□□□□ -1.63
HCM1	YCR065W	NSE3	Q05541	303 aa		4.86	□□□□□ -1.63
HCM1	YCR065W	APL5	Q08951	932 aa	Known RBP	4.86	□□□□□ -1.63
HCM1	YCR065W	DED1	P06634	604 aa	Known RBP	4.86	□□□□□ -1.63
HCM1	YCR065W	AKR1	P39010	764 aa		4.86	□□□□□ -1.63
HCM1	YCR065W	HXT13	P39924	564 aa		4.86	□□□□□ -1.63
HCM1	YCR065W	YGR045C	P53229	120 aa		4.86	□□□□□ -1.63
HCM1	YCR065W	HXT17	P53631	564 aa		4.86	□□□□□ -1.63
HCM1	YCR065W	ELA1	P53861	379 aa	Predicted RBP	4.86	□□□□□ -1.63
HCM1	YCR065W	HXT15	P54854	567 aa		4.86	□□□□□ -1.63
HCM1	YCR065W	YSH1	Q06224	779 aa	Predicted RBP	4.86	□□□□□ -1.63
HCM1	YCR065W	RAD51	P25454	400 aa		4.85	□□□□□ -1.63
HCM1	YCR065W	RPN12	P32496	274 aa		4.85	□□□□□ -1.63
HCM1	YCR065W	GRX4	P32642	244 aa		4.85	□□□□□ -1.63
HCM1	YCR065W	PGM1	P33401	570 aa	Known RBP	4.85	□□□□□ -1.63
HCM1	YCR065W	ARL1	P38116	183 aa	Known RBP	4.85	□□□□□ -1.63
HCM1	YCR065W	SEC9	P40357	651 aa		4.85	□□□□□ -1.63
HCM1	YCR065W	MTR4	P47047	1073 aa	Known RBP	4.85	□□□□□ -1.63
HCM1	YCR065W	YNR063W	P53749	607 aa		4.85	□□□□□ -1.63
HCM1	YCR065W	MDM1	Q01846	1127 aa		4.85	□□□□□ -1.63
HCM1	YCR065W	CLF1	Q12309	687 aa	Predicted RBP	4.85	□□□□□ -1.63
HCM1	YCR065W	HSP42	Q12329	375 aa		4.85	□□□□□ -1.63
HCM1	YCR065W	VPS5	Q92331	675 aa		4.85	□□□□□ -1.63
HCM1	YCR065W	ROD1	Q02805	837 aa		4.84	□□□□□ -1.63
HCM1	YCR065W	YPL034W	Q03083	165 aa		4.84	□□□□□ -1.63
HCM1	YCR065W	MAG2	Q06436	670 aa	Known RBP	4.84	□□□□□ -1.63
HCM1	YCR065W	YLL054C	Q12244	843 aa		4.84	□□□□□ -1.63
HCM1	YCR065W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
HCM1	YCR065W	AFG2	P32794	780 aa		4.83	□□□□□ -1.64
HCM1	YCR065W	VPS24	P36095	224 aa	Known RBP	4.83	□□□□□ -1.64
HCM1	YCR065W	MSH4	P40965	878 aa	Predicted RBP	4.83	□□□□□ -1.64
HCM1	YCR065W	CTF4	Q01454	927 aa		4.83	□□□□□ -1.64
HCM1	YCR065W	VPS16	Q03308	798 aa		4.83	□□□□□ -1.64
HCM1	YCR065W	EST2	Q06163	884 aa		4.83	□□□□□ -1.64
HCM1	YCR065W	CDC34	P14682	295 aa		4.83	□□□□□ -1.64
HCM1	YCR065W	TRX2	P22803	104 aa	Known RBP	4.83	□□□□□ -1.64
HCM1	YCR065W	ADD66	P36040	267 aa		4.83	□□□□□ -1.64
HCM1	YCR065W	YAR028W	P39548	234 aa		4.83	□□□□□ -1.64
HCM1	YCR065W	PES4	P39684	611 aa		4.83	□□□□□ -1.64
HCM1	YCR065W	PIL1	P53252	339 aa	Known RBP	4.83	□□□□□ -1.64
HCM1	YCR065W	ALG12	P53730	551 aa		4.83	□□□□□ -1.64
HCM1	YCR065W	SIW14	P53965	281 aa		4.83	□□□□□ -1.64
HCM1	YCR065W	RAT1	Q02792	1006 aa	Known RBP	4.83	□□□□□ -1.64
HCM1	YCR065W	HEL2	Q05580	639 aa	Known RBP	4.83	□□□□□ -1.64
HCM1	YCR065W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
HCM1	YCR065W	AVO1	Q08236	1176 aa		4.83	□□□□□ -1.64
HCM1	YCR065W	NOP58	Q12499	511 aa	Known RBP	4.83	□□□□□ -1.64
HCM1	YCR065W	SWI3	P32591	825 aa		4.82	□□□□□ -1.64
HCM1	YCR065W	FUI1	P38196	639 aa		4.82	□□□□□ -1.64
HCM1	YCR065W	EAR1	Q03212	550 aa		4.82	□□□□□ -1.64
HCM1	YCR065W	PIN2	Q12057	282 aa		4.82	□□□□□ -1.64
HCM1	YCR065W	CIT2	P08679	460 aa		4.81	□□□□□ -1.64
HCM1	YCR065W	MKK2	P32491	506 aa		4.81	□□□□□ -1.64
HCM1	YCR065W	SEC6	P32844	805 aa		4.81	□□□□□ -1.64
HCM1	YCR065W	FAA4	P47912	694 aa	Known RBP	4.81	□□□□□ -1.64
HCM1	YCR065W	PRP43	P53131	767 aa	Known RBP	4.81	□□□□□ -1.64
HCM1	YCR065W	PRP3	Q03338	469 aa	Predicted RBP	4.81	□□□□□ -1.64
HCM1	YCR065W	POB3	Q04636	552 aa	Known RBP	4.81	□□□□□ -1.64
HCM1	YCR065W	GIC2	Q06648	383 aa		4.81	□□□□□ -1.64
HCM1	YCR065W	RTT10	Q08924	1013 aa		4.81	□□□□□ -1.64
HCM1	YCR065W	SPA2	P23201	1466 aa	Known RBP	4.81	□□□□□ -1.64
HCM1	YCR065W	THS1	P04801	734 aa	Known RBP	4.8	□□□□□ -1.64
HCM1	YCR065W	DPB3	P27344	201 aa		4.8	□□□□□ -1.64
HCM1	YCR065W	MNR2	P35724	969 aa		4.8	□□□□□ -1.64
HCM1	YCR065W	MAD1	P40957	749 aa		4.8	□□□□□ -1.64
HCM1	YCR065W	BFA1	P47113	574 aa		4.8	□□□□□ -1.64
HCM1	YCR065W	EEB1	Q02891	456 aa		4.8	□□□□□ -1.64
HCM1	YCR065W	YLR122C	Q12312	125 aa		4.8	□□□□□ -1.64
HCM1	YCR065W	CYB2	P00175	591 aa		4.8	□□□□□ -1.64
HCM1	YCR065W	TFC3	P34111	1160 aa		4.8	□□□□□ -1.64
HCM1	YCR065W	RER2	P35196	286 aa		4.8	□□□□□ -1.64
HCM1	YCR065W	GRX7	P38068	203 aa		4.8	□□□□□ -1.64
HCM1	YCR065W	SAF1	P38352	637 aa		4.8	□□□□□ -1.64
HCM1	YCR065W	GPI8	P49018	411 aa		4.8	□□□□□ -1.64
HCM1	YCR065W	ALT1	P52893	592 aa		4.8	□□□□□ -1.64
HCM1	YCR065W	ALD6	P54115	500 aa	Known RBP	4.8	□□□□□ -1.64
HCM1	YCR065W	RKM2	Q03942	479 aa		4.8	□□□□□ -1.64
HCM1	YCR065W	RPS4A	P0CX35	261 aa	Known RBP	4.79	□□□□□ -1.64
HCM1	YCR065W	RPS4B	P0CX36	261 aa	Known RBP	4.79	□□□□□ -1.64
HCM1	YCR065W	NFS1	P25374	497 aa		4.79	□□□□□ -1.64
HCM1	YCR065W	BRF1	P29056	596 aa		4.79	□□□□□ -1.64
HCM1	YCR065W	COQ2	P32378	372 aa		4.79	□□□□□ -1.64
HCM1	YCR065W	SMY2	P32909	740 aa	Known RBP	4.79	□□□□□ -1.64
HCM1	YCR065W	WHI3	P34761	661 aa	Known RBP	4.79	□□□□□ -1.64
HCM1	YCR065W	ALG3	P38179	458 aa		4.79	□□□□□ -1.64
HCM1	YCR065W	ATG14	P38270	344 aa		4.79	□□□□□ -1.64
HCM1	YCR065W	MEP1	P40260	492 aa		4.79	□□□□□ -1.64
HCM1	YCR065W	SRP1	Q02821	542 aa	Known RBP	4.79	□□□□□ -1.64
HCM1	YCR065W	RSA3	Q05942	220 aa	Known RBP	4.79	□□□□□ -1.64
HCM1	YCR065W	CEX1	Q12453	761 aa		4.79	□□□□□ -1.64
HCM1	YCR065W	RET1	P22276	1149 aa	Known RBP	4.78	□□□□□ -1.64
HCM1	YCR065W	PPH3	P32345	308 aa		4.78	□□□□□ -1.64
HCM1	YCR065W	SRP40	P32583	406 aa	Predicted RBP	4.78	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 59.1 ms