RNA–Protein interactions for RNA: YCL055W

KAR4, Transcript of Transcription factor required for response to pheromones, yeast

Gene KAR4, Length 1,008 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KAR4	YCL055W	YGL140C	P53120	1219 aa		5.06	□□□□□ -1.6
KAR4	YCL055W	ENV11	P53246	860 aa		5.06	□□□□□ -1.6
KAR4	YCL055W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	5.06	□□□□□ -1.6	not detected
KAR4	YCL055W	RSA3	Q05942	220 aa	Known RBP	5.06	□□□□□ -1.6
KAR4	YCL055W	LAP2	Q10740	671 aa		5.06	□□□□□ -1.6
KAR4	YCL055W	GCR1	P07261	785 aa		5.05	□□□□□ -1.6
KAR4	YCL055W	MNR2	P35724	969 aa		5.05	□□□□□ -1.6
KAR4	YCL055W	XKS1	P42826	600 aa		5.05	□□□□□ -1.6
KAR4	YCL055W	VPS16	Q03308	798 aa		5.05	□□□□□ -1.6
KAR4	YCL055W	PIN2	Q12057	282 aa		5.05	□□□□□ -1.6
KAR4	YCL055W	HEM13	P11353	328 aa	Known RBP	5.04	□□□□□ -1.6
KAR4	YCL055W	SEC23	P15303	768 aa	Known RBP	5.04	□□□□□ -1.6
KAR4	YCL055W	CLN2	P20438	545 aa		5.04	□□□□□ -1.6
KAR4	YCL055W	MRL1	Q06815	381 aa		5.04	□□□□□ -1.6
KAR4	YCL055W	SPS1	P08458	490 aa		5.03	□□□□□ -1.6
KAR4	YCL055W	YPT53	P36019	220 aa		5.03	□□□□□ -1.6
KAR4	YCL055W	YJL045W	P47052	634 aa		5.03	□□□□□ -1.6
KAR4	YCL055W	ALD6	P54115	500 aa	Known RBP	5.03	□□□□□ -1.6
KAR4	YCL055W	UTP5	Q04177	643 aa	Known RBP	5.03	□□□□□ -1.6
KAR4	YCL055W	SGD1	Q06132	899 aa		5.03	□□□□□ -1.6
KAR4	YCL055W	NBA1	Q08229	501 aa	Known RBP	5.03	□□□□□ -1.6
KAR4	YCL055W	CDC34	P14682	295 aa		5.02	□□□□□ -1.61
KAR4	YCL055W	RDH54	P38086	958 aa		5.02	□□□□□ -1.61
KAR4	YCL055W	ATG14	P38270	344 aa		5.02	□□□□□ -1.61
KAR4	YCL055W	LAM1	P38851	1228 aa		5.02	□□□□□ -1.61
KAR4	YCL055W	MEF2	P39677	819 aa		5.02	□□□□□ -1.61
KAR4	YCL055W	VAC8	P39968	578 aa		5.02	□□□□□ -1.61
KAR4	YCL055W	CWC24	P53769	259 aa		5.02	□□□□□ -1.61
KAR4	YCL055W	GCN5	Q03330	439 aa		5.02	□□□□□ -1.61
KAR4	YCL055W	RSC58	Q07979	502 aa		5.02	□□□□□ -1.61
KAR4	YCL055W	VMA4	P22203	233 aa	Known RBP	5.01	□□□□□ -1.61
KAR4	YCL055W	DUT1	P33317	147 aa		5.01	□□□□□ -1.61
KAR4	YCL055W	TRM2	P33753	639 aa		5.01	□□□□□ -1.61
KAR4	YCL055W	RTT10	Q08924	1013 aa		5.01	□□□□□ -1.61
KAR4	YCL055W	PUS9	Q12069	462 aa		5.01	□□□□□ -1.61
KAR4	YCL055W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	5	□□□□□ -1.61	not detected
KAR4	YCL055W	TAF13	P11747	167 aa		5	□□□□□ -1.61
KAR4	YCL055W	GNP1	P48813	663 aa		5	□□□□□ -1.61
KAR4	YCL055W	GDE1	Q02979	1223 aa		5	□□□□□ -1.61
KAR4	YCL055W	DED1	P06634	604 aa	Known RBP	4.99	□□□□□ -1.61
KAR4	YCL055W	RAD27	P26793	382 aa		4.99	□□□□□ -1.61
KAR4	YCL055W	FAA4	P47912	694 aa	Known RBP	4.99	□□□□□ -1.61
KAR4	YCL055W	HNT2	P49775	206 aa		4.99	□□□□□ -1.61
KAR4	YCL055W	ROD1	Q02805	837 aa		4.99	□□□□□ -1.61
KAR4	YCL055W	EST2	Q06163	884 aa		4.99	□□□□□ -1.61
KAR4	YCL055W	YSC84	P32793	468 aa		4.98	□□□□□ -1.61
KAR4	YCL055W	QNS1	P38795	714 aa	Known RBP	4.98	□□□□□ -1.61
KAR4	YCL055W	HXT13	P39924	564 aa		4.98	□□□□□ -1.61
KAR4	YCL055W	MSE1	P48525	536 aa		4.98	□□□□□ -1.61
KAR4	YCL055W	HXT17	P53631	564 aa		4.98	□□□□□ -1.61
KAR4	YCL055W	YNR063W	P53749	607 aa		4.98	□□□□□ -1.61
KAR4	YCL055W	SIW14	P53965	281 aa		4.98	□□□□□ -1.61
KAR4	YCL055W	HXT15	P54854	567 aa		4.98	□□□□□ -1.61
KAR4	YCL055W	TMA46	Q12000	345 aa	Known RBP	4.98	□□□□□ -1.61
KAR4	YCL055W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
KAR4	YCL055W	ADD66	P36040	267 aa		4.97	□□□□□ -1.61
KAR4	YCL055W	YGR053C	P53234	283 aa		4.97	□□□□□ -1.61
KAR4	YCL055W	EEB1	Q02891	456 aa		4.97	□□□□□ -1.61
KAR4	YCL055W	CYC1	P00044	109 aa	Predicted RBP	4.96	□□□□□ -1.62
KAR4	YCL055W	COQ4	O13525	335 aa		4.95	□□□□□ -1.62
KAR4	YCL055W	MKK2	P32491	506 aa		4.95	□□□□□ -1.62
KAR4	YCL055W	DOM34	P33309	386 aa		4.95	□□□□□ -1.62
KAR4	YCL055W	RER2	P35196	286 aa		4.95	□□□□□ -1.62
KAR4	YCL055W	CCZ1	P38273	704 aa		4.95	□□□□□ -1.62
KAR4	YCL055W	VPS53	P47061	822 aa		4.95	□□□□□ -1.62
KAR4	YCL055W	ENT3	P47160	408 aa		4.95	□□□□□ -1.62
KAR4	YCL055W	SLI1	P53304	468 aa		4.95	□□□□□ -1.62
KAR4	YCL055W	WRS1	Q12109	432 aa	Known RBP	4.95	□□□□□ -1.62
KAR4	YCL055W	PRI2	P20457	528 aa		4.94	□□□□□ -1.62
KAR4	YCL055W	SEC26	P41810	973 aa	Known RBP	4.94	□□□□□ -1.62
KAR4	YCL055W	NNF1	P47149	201 aa		4.94	□□□□□ -1.62
KAR4	YCL055W	RAT1	Q02792	1006 aa	Known RBP	4.94	□□□□□ -1.62
KAR4	YCL055W	ROT1	Q03691	256 aa		4.94	□□□□□ -1.62
KAR4	YCL055W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
KAR4	YCL055W	RKM2	Q03942	479 aa		4.94	□□□□□ -1.62
KAR4	YCL055W	RCL1	Q08096	367 aa	Predicted RBP	4.94	□□□□□ -1.62
KAR4	YCL055W	INO80	P53115	1489 aa		4.94	□□□□□ -1.62
KAR4	YCL055W	TRP2	P00899	507 aa	Known RBP	4.93	□□□□□ -1.62
KAR4	YCL055W	HCM1	P25364	564 aa		4.93	□□□□□ -1.62
KAR4	YCL055W	AFG2	P32794	780 aa		4.93	□□□□□ -1.62
KAR4	YCL055W	TYW3	P53177	273 aa		4.93	□□□□□ -1.62
KAR4	YCL055W	DUS4	Q06063	367 aa		4.93	□□□□□ -1.62
KAR4	YCL055W	OPI10	Q08202	246 aa		4.93	□□□□□ -1.62
KAR4	YCL055W	FAL1	Q12099	399 aa	Known RBP	4.93	□□□□□ -1.62
KAR4	YCL055W	SSF2	Q12153	453 aa	Predicted RBP	4.93	□□□□□ -1.62
KAR4	YCL055W	BAS1	P22035	811 aa		4.92	□□□□□ -1.62
KAR4	YCL055W	SYP1	P25623	870 aa	Known RBP	4.92	□□□□□ -1.62
KAR4	YCL055W	LYP1	P32487	611 aa		4.92	□□□□□ -1.62
KAR4	YCL055W	YKL069W	P36088	180 aa		4.91	□□□□□ -1.62
KAR4	YCL055W	ALG3	P38179	458 aa		4.91	□□□□□ -1.62
KAR4	YCL055W	OCA5	P38738	679 aa		4.91	□□□□□ -1.62
KAR4	YCL055W	SUN4	P53616	420 aa		4.91	□□□□□ -1.62
KAR4	YCL055W	PLB2	Q03674	706 aa		4.91	□□□□□ -1.62
KAR4	YCL055W	TIF35	Q04067	274 aa	Known RBP	4.91	□□□□□ -1.62
KAR4	YCL055W	URN1	Q06525	465 aa	Known RBP	4.91	□□□□□ -1.62
KAR4	YCL055W	RSB1	Q08417	382 aa		4.91	□□□□□ -1.62
KAR4	YCL055W	PTC5	Q12511	572 aa		4.91	□□□□□ -1.62
KAR4	YCL055W	DBP5	P20449	482 aa	Known RBP	4.9	□□□□□ -1.63
KAR4	YCL055W	STE11	P23561	717 aa		4.9	□□□□□ -1.63
KAR4	YCL055W	MOT2	P34909	587 aa	Known RBP	4.9	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms