RNA–Protein interactions for RNA: YBR235W

VHC1, Transcript of Vacuolar membrane cation-chloride cotransporter (CCC), yeast

Gene VHC1, Length 3,363 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VHC1	YBR235W	PCL10	P53124	433 aa		4.98	□□□□□ -1.61
VHC1	YBR235W	LSG1	P53145	640 aa	Known RBP	4.98	□□□□□ -1.61
VHC1	YBR235W	SXM1	Q04175	944 aa	Known RBP	4.98	□□□□□ -1.61
VHC1	YBR235W	SOG2	Q08817	791 aa		4.98	□□□□□ -1.61
VHC1	YBR235W	PCL8	Q08966	492 aa		4.98	□□□□□ -1.61
VHC1	YBR235W	MST1	P07236	462 aa		4.98	□□□□□ -1.61
VHC1	YBR235W	MAK16	P10962	306 aa	Predicted RBP	4.98	□□□□□ -1.61
VHC1	YBR235W	SEC2	P17065	759 aa		4.98	□□□□□ -1.61
VHC1	YBR235W	RAD53	P22216	821 aa		4.98	□□□□□ -1.61
VHC1	YBR235W	GVP36	P40531	326 aa	Known RBP	4.98	□□□□□ -1.61
VHC1	YBR235W	YFL066C	P43538	392 aa		4.98	□□□□□ -1.61
VHC1	YBR235W	UBP6	P43593	499 aa	Known RBP	4.98	□□□□□ -1.61
VHC1	YBR235W	DCP2	P53550	970 aa	Known RBP	4.98	□□□□□ -1.61
VHC1	YBR235W	WAR1	Q03631	944 aa		4.98	□□□□□ -1.61
VHC1	YBR235W	PPM1	Q04081	328 aa		4.98	□□□□□ -1.61
VHC1	YBR235W	YLH47	Q06493	454 aa		4.98	□□□□□ -1.61
VHC1	YBR235W	VPS36	Q06696	566 aa		4.98	□□□□□ -1.61
VHC1	YBR235W	RRP6	Q12149	733 aa	Known RBP	4.98	□□□□□ -1.61
VHC1	YBR235W	BBP1	Q12365	385 aa		4.98	□□□□□ -1.61
VHC1	YBR235W	YRF1-4	O13559	1382 aa		4.98	□□□□□ -1.61
VHC1	YBR235W	YML133C	Q03099	1374 aa		4.98	□□□□□ -1.61
VHC1	YBR235W	YLL067C	Q07888	1374 aa		4.98	□□□□□ -1.61
VHC1	YBR235W	YLL066C	Q99208	1374 aa		4.98	□□□□□ -1.61
VHC1	YBR235W	ATG2	P53855	1592 aa		4.98	□□□□□ -1.61
VHC1	YBR235W	URE2	P23202	354 aa	Known RBP	4.98	□□□□□ -1.61
VHC1	YBR235W	DPB3	P27344	201 aa		4.98	□□□□□ -1.61
VHC1	YBR235W	TFC4	P33339	1025 aa		4.98	□□□□□ -1.61
VHC1	YBR235W	UGA2	P38067	497 aa		4.98	□□□□□ -1.61
VHC1	YBR235W	UBP15	P50101	1230 aa		4.98	□□□□□ -1.61
VHC1	YBR235W	ATG1	P53104	897 aa		4.98	□□□□□ -1.61
VHC1	YBR235W	ZPR1	P53303	486 aa	Known RBP	4.98	□□□□□ -1.61
VHC1	YBR235W	UFD2	P54860	961 aa		4.98	□□□□□ -1.61
VHC1	YBR235W	ARP9	Q05123	467 aa		4.98	□□□□□ -1.61
VHC1	YBR235W	CLP1	Q08685	445 aa	Predicted RBP	4.98	□□□□□ -1.61
VHC1	YBR235W	RIB2	Q12362	591 aa	Known RBP	4.98	□□□□□ -1.61
VHC1	YBR235W	DNF2	Q12675	1612 aa		4.97	□□□□□ -1.61
VHC1	YBR235W	RNR2	P09938	399 aa	Known RBP	4.97	□□□□□ -1.61
VHC1	YBR235W	PTR2	P32901	601 aa		4.97	□□□□□ -1.61
VHC1	YBR235W	GCD14	P46959	383 aa	Predicted RBP	4.97	□□□□□ -1.61
VHC1	YBR235W	NNT1	Q05874	261 aa		4.97	□□□□□ -1.61
VHC1	YBR235W	RIO1	Q12196	484 aa	Known RBP	4.97	□□□□□ -1.61
VHC1	YBR235W	OCA6	Q12454	224 aa		4.97	□□□□□ -1.61
VHC1	YBR235W	DPS1	P04802	557 aa	Known RBP	4.97	□□□□□ -1.61
VHC1	YBR235W	PRP4	P20053	465 aa	Known RBP	4.97	□□□□□ -1.61
VHC1	YBR235W	TPS2	P31688	896 aa	Known RBP	4.97	□□□□□ -1.61
VHC1	YBR235W	YBR242W	P38331	238 aa		4.97	□□□□□ -1.61
VHC1	YBR235W	YBR287W	P38355	427 aa		4.97	□□□□□ -1.61
VHC1	YBR235W	REV7	P38927	245 aa		4.97	□□□□□ -1.61
VHC1	YBR235W	RGA1	P39083	1007 aa		4.97	□□□□□ -1.61
VHC1	YBR235W	ENP2	P48234	707 aa	Known RBP	4.97	□□□□□ -1.61
VHC1	YBR235W	GNP1	P48813	663 aa		4.97	□□□□□ -1.61
VHC1	YBR235W	TEL2	P53038	688 aa		4.97	□□□□□ -1.61
VHC1	YBR235W	RRP46	P53256	223 aa	Predicted RBP	4.97	□□□□□ -1.61
VHC1	YBR235W	ABP140	Q08641	628 aa	Known RBP	4.97	□□□□□ -1.61
VHC1	YBR235W	CDC25	P04821	1589 aa		4.97	□□□□□ -1.61
VHC1	YBR235W	ENO2	P00925	437 aa	Known RBP	4.96	□□□□□ -1.61
VHC1	YBR235W	PDE2	P06776	526 aa		4.96	□□□□□ -1.61
VHC1	YBR235W	MPH3	P0CE00	602 aa		4.96	□□□□□ -1.61
VHC1	YBR235W	VMA2	P16140	517 aa	Known RBP	4.96	□□□□□ -1.61
VHC1	YBR235W	RAD5	P32849	1169 aa	Predicted RBP	4.96	□□□□□ -1.61
VHC1	YBR235W	STO1	P34160	861 aa	Known RBP	4.96	□□□□□ -1.61
VHC1	YBR235W	CAJ1	P39101	391 aa		4.96	□□□□□ -1.61
VHC1	YBR235W	HYR1	P40581	163 aa	Known RBP	4.96	□□□□□ -1.61
VHC1	YBR235W	ARI1	P53111	347 aa	Known RBP	4.96	□□□□□ -1.61
VHC1	YBR235W	RAT1	Q02792	1006 aa	Known RBP	4.96	□□□□□ -1.61
VHC1	YBR235W	FDC1	Q03034	503 aa		4.96	□□□□□ -1.61
VHC1	YBR235W	RSM24	Q03976	319 aa		4.96	□□□□□ -1.61
VHC1	YBR235W	HMI1	Q12039	706 aa		4.96	□□□□□ -1.61
VHC1	YBR235W	LEU1	P07264	779 aa	Known RBP	4.96	□□□□□ -1.62
VHC1	YBR235W	PHO3	P24031	467 aa		4.96	□□□□□ -1.62
VHC1	YBR235W	ADY2	P25613	283 aa		4.96	□□□□□ -1.62
VHC1	YBR235W	POL4	P25615	582 aa		4.96	□□□□□ -1.62
VHC1	YBR235W	YEL043W	P32618	956 aa		4.96	□□□□□ -1.62
VHC1	YBR235W	KAP123	P40069	1113 aa	Known RBP	4.96	□□□□□ -1.62
VHC1	YBR235W	FAR7	P43592	221 aa		4.96	□□□□□ -1.62
VHC1	YBR235W	NCS2	P53923	493 aa	Predicted RBP	4.96	□□□□□ -1.62
VHC1	YBR235W	DML1	Q03652	475 aa		4.96	□□□□□ -1.62
VHC1	YBR235W	BUG1	Q12191	341 aa		4.96	□□□□□ -1.62
VHC1	YBR235W	GDB1	Q06625	1536 aa		4.96	□□□□□ -1.62
VHC1	YBR235W	RIC1	P40395	1056 aa		4.96	□□□□□ -1.62
VHC1	YBR235W	YJR008W	P47085	338 aa		4.96	□□□□□ -1.62
VHC1	YBR235W	STR2	P47164	639 aa		4.96	□□□□□ -1.62
VHC1	YBR235W	NOT5	Q12514	560 aa	Predicted RBP	4.96	□□□□□ -1.62
VHC1	YBR235W	DRS2	P39524	1355 aa		4.95	□□□□□ -1.62
VHC1	YBR235W	GPA1	P08539	472 aa		4.95	□□□□□ -1.62
VHC1	YBR235W	MSM1	P22438	575 aa		4.95	□□□□□ -1.62
VHC1	YBR235W	UBC6	P33296	250 aa	Predicted RBP	4.95	□□□□□ -1.62
VHC1	YBR235W	DYS1	P38791	387 aa		4.95	□□□□□ -1.62
VHC1	YBR235W	UBA2	P52488	636 aa		4.95	□□□□□ -1.62
VHC1	YBR235W	ATG17	Q06410	417 aa		4.95	□□□□□ -1.62
VHC1	YBR235W	THI22	Q06490	572 aa		4.95	□□□□□ -1.62
VHC1	YBR235W	TY2B-LR1	P0C2J3	1770 aa		4.95	□□□□□ -1.62
VHC1	YBR235W	TY2B-F	P0CX63	1770 aa		4.95	□□□□□ -1.62
VHC1	YBR235W	TY2B-GR2	P0CX64	1770 aa		4.95	□□□□□ -1.62
VHC1	YBR235W	TY2B-C	P25384	1770 aa		4.95	□□□□□ -1.62
VHC1	YBR235W	TY2B-DR2	Q03494	1770 aa		4.95	□□□□□ -1.62
VHC1	YBR235W	TY1B-DR1	Q03855	1755 aa		4.95	□□□□□ -1.62
VHC1	YBR235W	TY2B-DR3	Q07791	1770 aa	Known RBP	4.95	□□□□□ -1.62
VHC1	YBR235W	TY2B-OR1	Q12113	1770 aa		4.95	□□□□□ -1.62
VHC1	YBR235W	TY2B-DR1	Q12472	1770 aa		4.95	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 72.6 ms