RNA–Protein interactions for RNA: ENST00000635853.1

SPTAN1-228, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 5,870 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-228ENST00000635853 CCDC57Q2TAC2 916 aa11.48□□□□□ -0.57
SPTAN1-228ENST00000635853 CCDC181Q5TID7 509 aa11.48□□□□□ -0.57
SPTAN1-228ENST00000635853 TEX2Q8IWB9 1127 aa11.48□□□□□ -0.57
SPTAN1-228ENST00000635853 KINO60870 393 aaKnown RBP11.48□□□□□ -0.57
SPTAN1-228ENST00000635853 TRIM22Q8IYM9 498 aa11.48□□□□□ -0.57
SPTAN1-228ENST00000635853 HMGB2P26583 209 aaKnown RBP11.48□□□□□ -0.57
SPTAN1-228ENST00000635853 RSPH14Q9UHP6 348 aa11.48□□□□□ -0.57
SPTAN1-228ENST00000635853 TNIP1Q15025 636 aa11.48□□□□□ -0.57
SPTAN1-228ENST00000635853 STK38Q15208 465 aa11.48□□□□□ -0.57
SPTAN1-228ENST00000635853 SURF6O75683 361 aaKnown RBP11.47□□□□□ -0.57
SPTAN1-228ENST00000635853 DRC1Q96MC2 740 aa11.47□□□□□ -0.57
SPTAN1-228ENST00000635853 CABP2Q9NPB3 220 aa11.47□□□□□ -0.57
SPTAN1-228ENST00000635853 MICALCLQ6ZW33 695 aa11.47□□□□□ -0.57
SPTAN1-228ENST00000635853 SPG7Q9UQ90 795 aa11.47□□□□□ -0.57
SPTAN1-228ENST00000635853 DUSP27Q5VZP5 1158 aa11.47□□□□□ -0.57
SPTAN1-228ENST00000635853 SLU7O95391 586 aaKnown RBP11.47□□□□□ -0.57
SPTAN1-228ENST00000635853 USP5P45974 858 aa11.47□□□□□ -0.57
SPTAN1-228ENST00000635853 ZSCAN25Q6NSZ9 544 aa11.47□□□□□ -0.57
SPTAN1-228ENST00000635853 POTEJP0CG39 1038 aa11.47□□□□□ -0.57
SPTAN1-228ENST00000635853 FYCO1Q9BQS8 1478 aa11.46□□□□□ -0.57
SPTAN1-228ENST00000635853 FMNL2Q96PY5 1086 aa11.46□□□□□ -0.57
SPTAN1-228ENST00000635853 LRRCC1Q9C099 1032 aa11.46□□□□□ -0.57
SPTAN1-228ENST00000635853 GGNBP2Q9H3C7 697 aa11.46□□□□□ -0.57
SPTAN1-228ENST00000635853 CENPHQ9H3R5 247 aa11.46□□□□□ -0.57
SPTAN1-228ENST00000635853 TTC12Q9H892 705 aaPredicted RBP11.46□□□□□ -0.57
SPTAN1-228ENST00000635853 BMP2KQ9NSY1 1161 aaPredicted RBP11.46□□□□□ -0.57
SPTAN1-228ENST00000635853 CASQ1P31415 396 aa11.46□□□□□ -0.57
SPTAN1-228ENST00000635853 CEBPZQ03701 1054 aaKnown RBP11.46□□□□□ -0.57
SPTAN1-228ENST00000635853 WDR63Q8IWG1 891 aa11.46□□□□□ -0.57
SPTAN1-228ENST00000635853 RAI14Q9P0K7 980 aa11.46□□□□□ -0.57
SPTAN1-228ENST00000635853 DACH1Q9UI36 760 aa11.46□□□□□ -0.57
SPTAN1-228ENST00000635853 CBFA2T2O43439 604 aa11.46□□□□□ -0.58
SPTAN1-228ENST00000635853 TAX1BP1Q86VP1 789 aa11.46□□□□□ -0.58
SPTAN1-228ENST00000635853 CERS3Q8IU89 383 aa11.46□□□□□ -0.58
SPTAN1-228ENST00000635853 CA8P35219 290 aa11.46□□□□□ -0.58
SPTAN1-228ENST00000635853 SARNPP82979 210 aaKnown RBP11.46□□□□□ -0.58
SPTAN1-228ENST00000635853 WDR78Q5VTH9 848 aa11.46□□□□□ -0.58
SPTAN1-228ENST00000635853 TUBB4AP04350 444 aa11.45□□□□□ -0.58
SPTAN1-228ENST00000635853 GNAI3P08754 354 aa11.45□□□□□ -0.58
SPTAN1-228ENST00000635853 PDCP20941 246 aa11.45□□□□□ -0.58
SPTAN1-228ENST00000635853 SEC24BO95487 1268 aa11.45□□□□□ -0.58
SPTAN1-228ENST00000635853 KRT85P78386 507 aa11.45□□□□□ -0.58
SPTAN1-228ENST00000635853 SNW1Q13573 536 aaKnown RBP11.45□□□□□ -0.58
SPTAN1-228ENST00000635853 GSDMDP57764 484 aa11.45□□□□□ -0.58
SPTAN1-228ENST00000635853 TXNDC2Q86VQ3 553 aa11.45□□□□□ -0.58
SPTAN1-228ENST00000635853 CASKIN1Q8WXD9 1431 aa11.45□□□□□ -0.58
SPTAN1-228ENST00000635853 ZSCAN12O43309 604 aa11.45□□□□□ -0.58
SPTAN1-228ENST00000635853 PPFIBP1Q86W92 1011 aa11.45□□□□□ -0.58
SPTAN1-228ENST00000635853 ZNF428Q96B54 188 aa11.45□□□□□ -0.58
SPTAN1-228ENST00000635853 PRDM4Q9UKN5 801 aa11.45□□□□□ -0.58
SPTAN1-228ENST00000635853 ANAPC15P60006 121 aa11.44□□□□□ -0.58
SPTAN1-228ENST00000635853 PPM1EQ8WY54 764 aa11.44□□□□□ -0.58
SPTAN1-228ENST00000635853 ZFP91Q96JP5 570 aaPredicted RBP11.44□□□□□ -0.58
SPTAN1-228ENST00000635853 JMYQ8N9B5 988 aa11.44□□□□□ -0.58
SPTAN1-228ENST00000635853 SERPINC1P01008 464 aa11.44□□□□□ -0.58
SPTAN1-228ENST00000635853 MYL6BP14649 208 aa11.44□□□□□ -0.58
SPTAN1-228ENST00000635853 ERO1AQ96HE7 468 aa11.44□□□□□ -0.58
SPTAN1-228ENST00000635853 SIL1Q9H173 461 aa11.44□□□□□ -0.58
SPTAN1-228ENST00000635853 NCAPD3P42695 1498 aa11.44□□□□□ -0.58
SPTAN1-228ENST00000635853 GOLGA6L7A0A1B0GV03 622 aa11.44□□□□□ -0.58
SPTAN1-228ENST00000635853 MICALL1Q8N3F8 863 aa11.44□□□□□ -0.58
SPTAN1-228ENST00000635853 MCM3P25205 808 aa11.43□□□□□ -0.58
SPTAN1-228ENST00000635853 BCCIPQ9P287 314 aaKnown RBP eCLIP11.43□□□□□ -0.58
SPTAN1-228ENST00000635853 JAKMIP3Q5VZ66 844 aa11.43□□□□□ -0.58
SPTAN1-228ENST00000635853 CRACR2BQ8N4Y2 399 aaPredicted RBP11.43□□□□□ -0.58
SPTAN1-228ENST00000635853 LIG1P18858 919 aa11.43□□□□□ -0.58
SPTAN1-228ENST00000635853 SPINK5Q9NQ38 1064 aaPredicted RBP11.43□□□□□ -0.58
SPTAN1-228ENST00000635853 NOB1Q9ULX3 412 aaKnown RBP11.43□□□□□ -0.58
SPTAN1-228ENST00000635853 POLA1P09884 1462 aaPredicted RBP11.43□□□□□ -0.58
SPTAN1-228ENST00000635853 IGHMBP2P38935 993 aaKnown RBP11.43□□□□□ -0.58
SPTAN1-228ENST00000635853 URI1O94763 535 aaPredicted RBP11.43□□□□□ -0.58
SPTAN1-228ENST00000635853 STK3Q13188 491 aa11.43□□□□□ -0.58
SPTAN1-228ENST00000635853 SMARCA4P51532 1647 aa11.43□□□□□ -0.58
SPTAN1-228ENST00000635853 SCAPERQ9BY12 1400 aa11.42□□□□□ -0.58
SPTAN1-228ENST00000635853 GBP6Q6ZN66 633 aa11.42□□□□□ -0.58
SPTAN1-228ENST00000635853 UBAC1Q9BSL1 405 aa11.42□□□□□ -0.58
SPTAN1-228ENST00000635853 ERBB4Q15303 1308 aa11.42□□□□□ -0.58
SPTAN1-228ENST00000635853 MAP9Q49MG5 647 aa11.42□□□□□ -0.58
SPTAN1-228ENST00000635853 GRIPAP1Q4V328 841 aa11.42□□□□□ -0.58
SPTAN1-228ENST00000635853 CEP57L1Q8IYX8 460 aa11.42□□□□□ -0.58
SPTAN1-228ENST00000635853 SRRTQ9BXP5 876 aaKnown RBP11.42□□□□□ -0.58
SPTAN1-228ENST00000635853 FKBP4Q02790 459 aaKnown RBP eCLIP11.42□□□□□ -0.58
SPTAN1-228ENST00000635853 KIAA1328Q86T90 577 aa11.42□□□□□ -0.58
SPTAN1-228ENST00000635853 HOMEZQ8IX15 550 aa11.41□□□□□ -0.58
SPTAN1-228ENST00000635853 TRMT1Q9NXH9 659 aaKnown RBP11.41□□□□□ -0.58
SPTAN1-228ENST00000635853 MX1P20591 662 aa11.41□□□□□ -0.58
SPTAN1-228ENST00000635853 MAP2K2P36507 400 aa11.41□□□□□ -0.58
SPTAN1-228ENST00000635853 UBE2HP62256 183 aa11.41□□□□□ -0.58
SPTAN1-228ENST00000635853 BMP2KLQ5H9B9 411 aa11.41□□□□□ -0.58
SPTAN1-228ENST00000635853 TMX1Q9H3N1 280 aa11.41□□□□□ -0.58
SPTAN1-228ENST00000635853 ZPR1O75312 459 aa11.41□□□□□ -0.58
SPTAN1-228ENST00000635853 HCLS1P14317 486 aaPredicted RBP11.41□□□□□ -0.58
SPTAN1-228ENST00000635853 CAPN2P17655 700 aa11.41□□□□□ -0.58
SPTAN1-228ENST00000635853 ATF7IPQ6VMQ6 1270 aa11.41□□□□□ -0.58
SPTAN1-228ENST00000635853 COMMD10Q9Y6G5 202 aa11.41□□□□□ -0.58
SPTAN1-228ENST00000635853 SFPQP23246 707 aaKnown RBP eCLIP11.41□□□□□ -0.58
SPTAN1-228ENST00000635853 LRCH2Q5VUJ6 765 aa11.41□□□□□ -0.58
SPTAN1-228ENST00000635853 TICAM2Q86XR7 235 aa11.41□□□□□ -0.58
SPTAN1-228ENST00000635853 GTF3C6Q969F1 213 aa11.41□□□□□ -0.58
SPTAN1-228ENST00000635853 HOMER2Q9NSB8 354 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms