RNA–Protein interactions for RNA: ENST00000635853.1

SPTAN1-228, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 5,870 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-228ENST00000635853 DCAF8L2P0C7V8 631 aa16.76■□□□□ 0.27
SPTAN1-228ENST00000635853 PELP1Q8IZL8 1130 aaKnown RBP16.47■□□□□ 0.23
SPTAN1-228ENST00000635853 MYT1Q01538 1121 aa16.35■□□□□ 0.21
SPTAN1-228ENST00000635853 SUPT5HO00267 1087 aaKnown RBP15.48■□□□□ 0.07
SPTAN1-228ENST00000635853 EHMT2Q96KQ7 1210 aa15.46■□□□□ 0.06
SPTAN1-228ENST00000635853 HRCP23327 699 aa15.42■□□□□ 0.06
SPTAN1-228ENST00000635853 FAM9AQ8IZU1 332 aaPredicted RBP15.39■□□□□ 0.05
SPTAN1-228ENST00000635853 PCGF6Q9BYE7 350 aa15.35■□□□□ 0.05
SPTAN1-228ENST00000635853 CENPBP07199 599 aaPredicted RBP15.33■□□□□ 0.05
SPTAN1-228ENST00000635853 ZEB1P37275 1124 aaPredicted RBP15.31■□□□□ 0.04
SPTAN1-228ENST00000635853 APLP2Q06481 763 aa15.3■□□□□ 0.04
SPTAN1-228ENST00000635853 NISCHQ9Y2I1 1504 aa15.24■□□□□ 0.03
SPTAN1-228ENST00000635853 TTBK1Q5TCY1 1321 aaPredicted RBP15.14■□□□□ 0.01
SPTAN1-228ENST00000635853 SHROOM4Q9ULL8 1493 aa15.08■□□□□ 0
SPTAN1-228ENST00000635853 ERICH6Q7L0X2 663 aa14.99□□□□□ -0.01
SPTAN1-228ENST00000635853 PPARGC1BQ86YN6 1023 aaKnown RBP14.89□□□□□ -0.03
SPTAN1-228ENST00000635853 ATP1B4Q9UN42 357 aaPredicted RBP14.86□□□□□ -0.03
SPTAN1-228ENST00000635853 CCER1Q8TC90 406 aaPredicted RBP14.85□□□□□ -0.03
SPTAN1-228ENST00000635853 RANGAP1P46060 587 aaPredicted RBP14.83□□□□□ -0.03
SPTAN1-228ENST00000635853 TRIM26Q12899 539 aaPredicted RBP14.75□□□□□ -0.05
SPTAN1-228ENST00000635853 YTHDC1Q96MU7 727 aaKnown RBP14.64□□□□□ -0.07
SPTAN1-228ENST00000635853 GTF3C3Q9Y5Q9 886 aa14.61□□□□□ -0.07
SPTAN1-228ENST00000635853 MYT1LQ9UL68 1186 aa14.59□□□□□ -0.07
SPTAN1-228ENST00000635853 ACIN1Q9UKV3 1341 aaKnown RBP14.56□□□□□ -0.08
SPTAN1-228ENST00000635853 SCAF1Q9H7N4 1312 aaKnown RBP14.53□□□□□ -0.08
SPTAN1-228ENST00000635853 NEFLP07196 543 aa14.5□□□□□ -0.09
SPTAN1-228ENST00000635853 DIEXFQ68CQ4 756 aaKnown RBP14.4□□□□□ -0.1
SPTAN1-228ENST00000635853 UBTFP17480 764 aaKnown RBP14.38□□□□□ -0.11
SPTAN1-228ENST00000635853 DAXXQ9UER7 740 aaPredicted RBP14.35□□□□□ -0.11
SPTAN1-228ENST00000635853 CHIC1Q5VXU3 224 aa14.35□□□□□ -0.11
SPTAN1-228ENST00000635853 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.32□□□□□ -0.12
SPTAN1-228ENST00000635853 HNRNPUL2Q1KMD3 747 aaKnown RBP14.32□□□□□ -0.12
SPTAN1-228ENST00000635853 POLR3GLQ9BT43 218 aa14.31□□□□□ -0.12
SPTAN1-228ENST00000635853 TRIM41Q8WV44 630 aa14.31□□□□□ -0.12
SPTAN1-228ENST00000635853 SLC4A1APQ9BWU0 796 aaKnown RBP14.25□□□□□ -0.13
SPTAN1-228ENST00000635853 NEUROD1Q13562 356 aa14.18□□□□□ -0.14
SPTAN1-228ENST00000635853 BCL11AQ9H165 835 aa14.18□□□□□ -0.14
SPTAN1-228ENST00000635853 CLSPNQ9HAW4 1339 aa14.17□□□□□ -0.14
SPTAN1-228ENST00000635853 RTL5Q5HYW3 569 aaPredicted RBP14.11□□□□□ -0.15
SPTAN1-228ENST00000635853 ANP32EQ9BTT0 268 aa14.11□□□□□ -0.15
SPTAN1-228ENST00000635853 DCAF1Q9Y4B6 1507 aa14.11□□□□□ -0.15
SPTAN1-228ENST00000635853 CNGB1Q14028 1251 aaPredicted RBP14.11□□□□□ -0.15
SPTAN1-228ENST00000635853 LOC105371045A0A1W2PR82 267 aa14.1□□□□□ -0.15
SPTAN1-228ENST00000635853 ITGAEP38570 1179 aa14.07□□□□□ -0.16
SPTAN1-228ENST00000635853 ZNF316A6NFI3 1004 aaPredicted RBP13.98□□□□□ -0.17
SPTAN1-228ENST00000635853 CCDC180Q9P1Z9 1646 aa13.9□□□□□ -0.18
SPTAN1-228ENST00000635853 CDK11AQ9UQ88 783 aaPredicted RBP13.89□□□□□ -0.19
SPTAN1-228ENST00000635853 BCANQ96GW7 911 aa13.89□□□□□ -0.19
SPTAN1-228ENST00000635853 SLC24A1O60721 1099 aa13.88□□□□□ -0.19
SPTAN1-228ENST00000635853 GLIPR1L2Q4G1C9 344 aa13.85□□□□□ -0.19
SPTAN1-228ENST00000635853 ZBTB47Q9UFB7 747 aaPredicted RBP13.83□□□□□ -0.2
SPTAN1-228ENST00000635853 EIF5BO60841 1220 aaKnown RBP13.75□□□□□ -0.21
SPTAN1-228ENST00000635853 TRIM52Q96A61 297 aa13.7□□□□□ -0.22
SPTAN1-228ENST00000635853 FKBP8Q14318 412 aa13.66□□□□□ -0.22
SPTAN1-228ENST00000635853 MYO15BQ96JP2 1530 aa13.65□□□□□ -0.22
SPTAN1-228ENST00000635853 FAM50AQ14320 339 aaKnown RBP13.65□□□□□ -0.22
SPTAN1-228ENST00000635853 ANP32AP39687 249 aaKnown RBP13.63□□□□□ -0.23
SPTAN1-228ENST00000635853 CSRNP3Q8WYN3 585 aa13.63□□□□□ -0.23
SPTAN1-228ENST00000635853 NEFMP07197 916 aa13.62□□□□□ -0.23
SPTAN1-228ENST00000635853 CANXP27824 592 aaKnown RBP13.61□□□□□ -0.23
SPTAN1-228ENST00000635853 ZNF326Q5BKZ1 582 aaKnown RBP13.6□□□□□ -0.23
SPTAN1-228ENST00000635853 FBLN2P98095 1184 aa13.59□□□□□ -0.23
SPTAN1-228ENST00000635853 PRKCSHP14314 528 aaPredicted RBP13.59□□□□□ -0.23
SPTAN1-228ENST00000635853 MIER1Q8N108 512 aa13.57□□□□□ -0.24
SPTAN1-228ENST00000635853 SUPT16HQ9Y5B9 1047 aaKnown RBP13.55□□□□□ -0.24
SPTAN1-228ENST00000635853 NBR1Q14596 966 aa13.54□□□□□ -0.24
SPTAN1-228ENST00000635853 PLPPR3Q6T4P5 718 aa13.53□□□□□ -0.24
SPTAN1-228ENST00000635853 ESF1Q9H501 851 aaKnown RBP13.53□□□□□ -0.24
SPTAN1-228ENST00000635853 ANP32CO43423 234 aa13.5□□□□□ -0.25
SPTAN1-228ENST00000635853 DEKP35659 375 aaKnown RBP13.47□□□□□ -0.25
SPTAN1-228ENST00000635853 TSHZ2Q9NRE2 1034 aa13.45□□□□□ -0.26
SPTAN1-228ENST00000635853 ERICH6BQ5W0A0 696 aa13.43□□□□□ -0.26
SPTAN1-228ENST00000635853 STAG3Q9UJ98 1225 aa13.4□□□□□ -0.26
SPTAN1-228ENST00000635853 RBM19Q9Y4C8 960 aaKnown RBP13.37□□□□□ -0.27
SPTAN1-228ENST00000635853 A0A0G2JS52 829 aa13.33□□□□□ -0.28
SPTAN1-228ENST00000635853 ARID3CA6NKF2 412 aa13.33□□□□□ -0.28
SPTAN1-228ENST00000635853 RTN4Q9NQC3 1192 aaKnown RBP13.32□□□□□ -0.28
SPTAN1-228ENST00000635853 NPM2Q86SE8 214 aaKnown RBP13.31□□□□□ -0.28
SPTAN1-228ENST00000635853 NOP58Q9Y2X3 529 aaKnown RBP13.31□□□□□ -0.28
SPTAN1-228ENST00000635853 CHGAP10645 457 aaKnown RBP13.31□□□□□ -0.28
SPTAN1-228ENST00000635853 ZNF777Q9ULD5 760 aaPredicted RBP13.29□□□□□ -0.28
SPTAN1-228ENST00000635853 PABPN1Q86U42 306 aaKnown RBP eCLIP13.29□□□□□ -0.28
SPTAN1-228ENST00000635853 CDK11BP21127 795 aaKnown RBP13.27□□□□□ -0.28
SPTAN1-228ENST00000635853 ANP32BQ92688 251 aaKnown RBP13.27□□□□□ -0.29
SPTAN1-228ENST00000635853 HSP90AA1P07900 732 aaKnown RBP13.25□□□□□ -0.29
SPTAN1-228ENST00000635853 NPM1P06748 294 aaKnown RBP eCLIP13.23□□□□□ -0.29
SPTAN1-228ENST00000635853 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.21□□□□□ -0.29
SPTAN1-228ENST00000635853 PPM1GO15355 546 aaPredicted RBP13.19□□□□□ -0.3
SPTAN1-228ENST00000635853 HNRNPUQ00839 825 aaKnown RBP eCLIP13.17□□□□□ -0.3
SPTAN1-228ENST00000635853 ZBTB7CA1YPR0 619 aa13.17□□□□□ -0.3
SPTAN1-228ENST00000635853 DDRGK1Q96HY6 314 aa13.17□□□□□ -0.3
SPTAN1-228ENST00000635853 P3H3Q8IVL6 736 aa13.16□□□□□ -0.3
SPTAN1-228ENST00000635853 CCDC136Q96JN2 1154 aa13.13□□□□□ -0.31
SPTAN1-228ENST00000635853 UPF2Q9HAU5 1272 aaKnown RBP13.12□□□□□ -0.31
SPTAN1-228ENST00000635853 PLEKHG5O94827 1062 aa13.12□□□□□ -0.31
SPTAN1-228ENST00000635853 DDX10Q13206 875 aaKnown RBP13.11□□□□□ -0.31
SPTAN1-228ENST00000635853 PPP4R2Q9NY27 417 aa13.11□□□□□ -0.31
SPTAN1-228ENST00000635853 IRX6P78412 446 aaPredicted RBP13.1□□□□□ -0.31
SPTAN1-228ENST00000635853 NAP1L5Q96NT1 182 aaPredicted RBP13.1□□□□□ -0.31
SPTAN1-228ENST00000635853 FANCIQ9NVI1 1328 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms