RNA–Protein interactions for RNA: ENST00000574728.1

PRPF8-211, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-211ENST00000574728 DEPDC4Q8N2C3 294 aa7.7□□□□□ -1.18
PRPF8-211ENST00000574728 PBXIP1Q96AQ6 731 aa7.7□□□□□ -1.18
PRPF8-211ENST00000574728 TOR4AQ9NXH8 423 aa7.7□□□□□ -1.18
PRPF8-211ENST00000574728 CD109Q6YHK3 1445 aa7.69□□□□□ -1.18
PRPF8-211ENST00000574728 CASKIN1Q8WXD9 1431 aa7.69□□□□□ -1.18
PRPF8-211ENST00000574728 LOC105371045A0A1W2PR82 267 aa7.69□□□□□ -1.18
PRPF8-211ENST00000574728 NNTQ13423 1086 aa7.69□□□□□ -1.18
PRPF8-211ENST00000574728 TSGA10IPQ3SY00 556 aa7.69□□□□□ -1.18
PRPF8-211ENST00000574728 TRIM67Q6ZTA4 783 aa7.69□□□□□ -1.18
PRPF8-211ENST00000574728 SIRT1Q96EB6 747 aa7.69□□□□□ -1.18
PRPF8-211ENST00000574728 ABCA9Q8IUA7 1624 aa7.69□□□□□ -1.18
PRPF8-211ENST00000574728 NR3C2P08235 984 aa7.68□□□□□ -1.18
PRPF8-211ENST00000574728 USP4Q13107 963 aa7.68□□□□□ -1.18
PRPF8-211ENST00000574728 PPP1R26Q5T8A7 1209 aaPredicted RBP7.68□□□□□ -1.18
PRPF8-211ENST00000574728 CDCA7Q9BWT1 371 aaPredicted RBP7.68□□□□□ -1.18
PRPF8-211ENST00000574728 ESF1Q9H501 851 aaKnown RBP7.68□□□□□ -1.18
PRPF8-211ENST00000574728 VRTNQ9H8Y1 702 aa7.68□□□□□ -1.18
PRPF8-211ENST00000574728 PGPEP1Q9NXJ5 209 aa7.68□□□□□ -1.18
PRPF8-211ENST00000574728 NOD1Q9Y239 953 aa7.68□□□□□ -1.18
PRPF8-211ENST00000574728 EMILIN1Q9Y6C2 1016 aa7.68□□□□□ -1.18
PRPF8-211ENST00000574728 LRRIQ1Q96JM4 1722 aa7.67□□□□□ -1.18
PRPF8-211ENST00000574728 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.67□□□□□ -1.18
PRPF8-211ENST00000574728 ATP5J2-PTCD1G3V325 749 aa7.67□□□□□ -1.18
PRPF8-211ENST00000574728 J3QL48 77 aa7.67□□□□□ -1.18
PRPF8-211ENST00000574728 MYCP01106 439 aaPredicted RBP7.67□□□□□ -1.18
PRPF8-211ENST00000574728 TMPRSS4Q9NRS4 437 aa7.67□□□□□ -1.18
PRPF8-211ENST00000574728 MKRN1Q9UHC7 482 aaKnown RBP7.67□□□□□ -1.18
PRPF8-211ENST00000574728 PDZRN3Q9UPQ7 1066 aa7.67□□□□□ -1.18
PRPF8-211ENST00000574728 ACIN1Q9UKV3 1341 aaKnown RBP7.67□□□□□ -1.18
PRPF8-211ENST00000574728 CEP162Q5TB80 1403 aa7.67□□□□□ -1.18
PRPF8-211ENST00000574728 PCF11O94913 1555 aaKnown RBP7.67□□□□□ -1.18
PRPF8-211ENST00000574728 CFAP43Q8NDM7 1665 aa7.67□□□□□ -1.18
PRPF8-211ENST00000574728 SMPD1P17405 629 aa7.66□□□□□ -1.18
PRPF8-211ENST00000574728 MYT1Q01538 1121 aa7.66□□□□□ -1.18
PRPF8-211ENST00000574728 CC2D2BQ6DHV5 1058 aa7.66□□□□□ -1.18
PRPF8-211ENST00000574728 TRIM50Q86XT4 487 aa7.66□□□□□ -1.18
PRPF8-211ENST00000574728 TEX14Q8IWB6 1497 aa7.66□□□□□ -1.18
PRPF8-211ENST00000574728 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.66□□□□□ -1.18
PRPF8-211ENST00000574728 ARAP3Q8WWN8 1544 aa7.66□□□□□ -1.18
PRPF8-211ENST00000574728 KDM6BO15054 1643 aa7.66□□□□□ -1.18
PRPF8-211ENST00000574728 TSPOAP1O95153 1857 aa7.66□□□□□ -1.18
PRPF8-211ENST00000574728 ATP1A2P50993 1020 aa7.65□□□□□ -1.18
PRPF8-211ENST00000574728 ERVK-9P63128 1117 aa7.65□□□□□ -1.18
PRPF8-211ENST00000574728 SRPK2P78362 688 aaKnown RBP7.65□□□□□ -1.18
PRPF8-211ENST00000574728 CDCA8Q53HL2 280 aa7.65□□□□□ -1.18
PRPF8-211ENST00000574728 KANK4Q5T7N3 995 aaPredicted RBP7.65□□□□□ -1.18
PRPF8-211ENST00000574728 TTC37Q6PGP7 1564 aa7.65□□□□□ -1.18
PRPF8-211ENST00000574728 HECW1Q76N89 1606 aa7.65□□□□□ -1.18
PRPF8-211ENST00000574728 ZNF784Q8NCA9 323 aaPredicted RBP7.65□□□□□ -1.18
PRPF8-211ENST00000574728 ARXQ96QS3 562 aa7.65□□□□□ -1.18
PRPF8-211ENST00000574728 FYCO1Q9BQS8 1478 aa7.65□□□□□ -1.18
PRPF8-211ENST00000574728 CYLDQ9NQC7 956 aa7.65□□□□□ -1.18
PRPF8-211ENST00000574728 TROQ12816 1431 aaPredicted RBP7.64□□□□□ -1.19
PRPF8-211ENST00000574728 PLEKHD1A6NEE1 506 aa7.64□□□□□ -1.19
PRPF8-211ENST00000574728 LARP1Q6PKG0 1096 aaKnown RBP7.64□□□□□ -1.19
PRPF8-211ENST00000574728 FAM196BA6NMK8 535 aa7.63□□□□□ -1.19
PRPF8-211ENST00000574728 RASA1P20936 1047 aa7.63□□□□□ -1.19
PRPF8-211ENST00000574728 SCTRP47872 440 aa7.63□□□□□ -1.19
PRPF8-211ENST00000574728 WDR4P57081 412 aaKnown RBP7.63□□□□□ -1.19
PRPF8-211ENST00000574728 GTF2IP78347 998 aa7.63□□□□□ -1.19
PRPF8-211ENST00000574728 KIF14Q15058 1648 aa7.63□□□□□ -1.19
PRPF8-211ENST00000574728 NEO1Q92859 1461 aa7.62□□□□□ -1.19
PRPF8-211ENST00000574728 PLCH2O75038 1416 aa7.62□□□□□ -1.19
PRPF8-211ENST00000574728 ATG7O95352 703 aa7.62□□□□□ -1.19
PRPF8-211ENST00000574728 ZIC2O95409 532 aaPredicted RBP7.62□□□□□ -1.19
PRPF8-211ENST00000574728 HOMEZQ8IX15 550 aa7.62□□□□□ -1.19
PRPF8-211ENST00000574728 OGFOD1Q8N543 542 aa7.62□□□□□ -1.19
PRPF8-211ENST00000574728 DNAAF2Q9NVR5 837 aaKnown RBP7.62□□□□□ -1.19
PRPF8-211ENST00000574728 FRMPD1Q5SYB0 1578 aa7.62□□□□□ -1.19
PRPF8-211ENST00000574728 CCDC18Q5T9S5 1454 aa7.62□□□□□ -1.19
PRPF8-211ENST00000574728 PHLDB1Q86UU1 1377 aa7.61□□□□□ -1.19
PRPF8-211ENST00000574728 FAM187AA6NFU0 413 aa7.61□□□□□ -1.19
PRPF8-211ENST00000574728 USP17L15C9J2P7 530 aa7.61□□□□□ -1.19
PRPF8-211ENST00000574728 USP17L10C9JJH3 530 aa7.61□□□□□ -1.19
PRPF8-211ENST00000574728 USP17L13C9JLJ4 530 aa7.61□□□□□ -1.19
PRPF8-211ENST00000574728 USP17L12C9JPN9 530 aa7.61□□□□□ -1.19
PRPF8-211ENST00000574728 USP17L11C9JVI0 530 aa7.61□□□□□ -1.19
PRPF8-211ENST00000574728 USP17L21D6R901 530 aa7.61□□□□□ -1.19
PRPF8-211ENST00000574728 USP17L18D6R9N7 530 aa7.61□□□□□ -1.19
PRPF8-211ENST00000574728 USP17L22D6RA61 530 aa7.61□□□□□ -1.19
PRPF8-211ENST00000574728 USP17L17D6RBQ6 530 aa7.61□□□□□ -1.19
PRPF8-211ENST00000574728 USP17L19D6RCP7 530 aa7.61□□□□□ -1.19
PRPF8-211ENST00000574728 USP17L20D6RJB6 530 aa7.61□□□□□ -1.19
PRPF8-211ENST00000574728 LILRA1O75019 489 aa7.61□□□□□ -1.19
PRPF8-211ENST00000574728 TIMP2P16035 220 aa7.61□□□□□ -1.19
PRPF8-211ENST00000574728 PSME1Q06323 249 aa7.61□□□□□ -1.19
PRPF8-211ENST00000574728 USP17L24Q0WX57 530 aa7.61□□□□□ -1.19
PRPF8-211ENST00000574728 CYP2U1Q7Z449 544 aa7.61□□□□□ -1.19
PRPF8-211ENST00000574728 HPS1Q92902 700 aa7.61□□□□□ -1.19
PRPF8-211ENST00000574728 ITPKCQ96DU7 683 aa7.61□□□□□ -1.19
PRPF8-211ENST00000574728 KLF16Q9BXK1 252 aaPredicted RBP7.61□□□□□ -1.19
PRPF8-211ENST00000574728 GFRA3O60609 400 aa7.6□□□□□ -1.19
PRPF8-211ENST00000574728 RAPGEF3O95398 923 aa7.6□□□□□ -1.19
PRPF8-211ENST00000574728 CLDN10P78369 228 aa7.6□□□□□ -1.19
PRPF8-211ENST00000574728 LARGE2Q8N3Y3 721 aa7.6□□□□□ -1.19
PRPF8-211ENST00000574728 OSBPL3Q9H4L5 887 aa7.6□□□□□ -1.19
PRPF8-211ENST00000574728 RBM19Q9Y4C8 960 aaKnown RBP7.6□□□□□ -1.19
PRPF8-211ENST00000574728 PCDHGA11Q9Y5H2 935 aa7.6□□□□□ -1.19
PRPF8-211ENST00000574728 AKNAQ7Z591 1439 aa7.6□□□□□ -1.19
PRPF8-211ENST00000574728 NRG2O14511 850 aaPredicted RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms