RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 ATP10DQ9P241 1426 aa20.71■□□□□ 0.91
PPP4R3A-208ENST00000555462 SURF6O75683 361 aaKnown RBP20.71■□□□□ 0.91
PPP4R3A-208ENST00000555462 PHAXQ9H814 394 aaKnown RBP20.71■□□□□ 0.91
PPP4R3A-208ENST00000555462 NOL7Q9UMY1 257 aaKnown RBP20.71■□□□□ 0.91
PPP4R3A-208ENST00000555462 GNAI2P04899 355 aa20.71■□□□□ 0.91
PPP4R3A-208ENST00000555462 NCBP3Q53F19 620 aaKnown RBP20.71■□□□□ 0.91
PPP4R3A-208ENST00000555462 FAM173BQ6P4H8 233 aa20.7■□□□□ 0.9
PPP4R3A-208ENST00000555462 CWC22Q9HCG8 908 aaKnown RBP20.7■□□□□ 0.9
PPP4R3A-208ENST00000555462 ZKSCAN5Q9Y2L8 839 aa20.7■□□□□ 0.9
PPP4R3A-208ENST00000555462 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.7■□□□□ 0.9
PPP4R3A-208ENST00000555462 PRR36Q9H6K5 1346 aa20.7■□□□□ 0.9
PPP4R3A-208ENST00000555462 METP08581 1390 aa20.7■□□□□ 0.9
PPP4R3A-208ENST00000555462 FERMT3Q86UX7 667 aa20.7■□□□□ 0.9
PPP4R3A-208ENST00000555462 TSPY26PQ9H489 355 aa20.7■□□□□ 0.9
PPP4R3A-208ENST00000555462 AMPHP49418 695 aa20.69■□□□□ 0.9
PPP4R3A-208ENST00000555462 CHMLP26374 656 aa20.69■□□□□ 0.9
PPP4R3A-208ENST00000555462 GIMAP6Q6P9H5 292 aa20.69■□□□□ 0.9
PPP4R3A-208ENST00000555462 PPFIA3O75145 1194 aa20.68■□□□□ 0.9
PPP4R3A-208ENST00000555462 TAOK2Q9UL54 1235 aa20.68■□□□□ 0.9
PPP4R3A-208ENST00000555462 MAP3K19Q56UN5 1328 aa20.68■□□□□ 0.9
PPP4R3A-208ENST00000555462 OS9Q13438 667 aaPredicted RBP20.68■□□□□ 0.9
PPP4R3A-208ENST00000555462 PDCL3Q9H2J4 239 aa20.68■□□□□ 0.9
PPP4R3A-208ENST00000555462 CCDC9Q9Y3X0 531 aaKnown RBP20.68■□□□□ 0.9
PPP4R3A-208ENST00000555462 MYO5BQ9ULV0 1848 aa20.68■□□□□ 0.9
PPP4R3A-208ENST00000555462 KNDC1Q76NI1 1749 aa20.67■□□□□ 0.9
PPP4R3A-208ENST00000555462 FLIIQ13045 1269 aa20.67■□□□□ 0.9
PPP4R3A-208ENST00000555462 ACEP12821 1306 aa20.67■□□□□ 0.9
PPP4R3A-208ENST00000555462 PIK3R4Q99570 1358 aa20.67■□□□□ 0.9
PPP4R3A-208ENST00000555462 ESF1Q9H501 851 aaKnown RBP20.66■□□□□ 0.9
PPP4R3A-208ENST00000555462 VPS37CA5D8V6 355 aaPredicted RBP20.66■□□□□ 0.9
PPP4R3A-208ENST00000555462 MCCP23508 829 aa20.66■□□□□ 0.9
PPP4R3A-208ENST00000555462 RASEFQ8IZ41 740 aa20.66■□□□□ 0.9
PPP4R3A-208ENST00000555462 COL9A3Q14050 684 aaPredicted RBP20.65■□□□□ 0.9
PPP4R3A-208ENST00000555462 CAMK4Q16566 473 aa20.65■□□□□ 0.9
PPP4R3A-208ENST00000555462 NECAB1Q8N987 351 aa20.65■□□□□ 0.9
PPP4R3A-208ENST00000555462 SRCIN1Q9C0H9 1055 aa20.65■□□□□ 0.9
PPP4R3A-208ENST00000555462 IGSF3O75054 1194 aa20.65■□□□□ 0.9
PPP4R3A-208ENST00000555462 CPS1P31327 1500 aa20.65■□□□□ 0.9
PPP4R3A-208ENST00000555462 BRD1O95696 1058 aa20.65■□□□□ 0.9
PPP4R3A-208ENST00000555462 ZHX1Q9UKY1 873 aaPredicted RBP20.65■□□□□ 0.9
PPP4R3A-208ENST00000555462 CLEC17AQ6ZS10 378 aa20.64■□□□□ 0.89
PPP4R3A-208ENST00000555462 CCDC83Q8IWF9 413 aa20.64■□□□□ 0.89
PPP4R3A-208ENST00000555462 ARHGEF40Q8TER5 1519 aa20.64■□□□□ 0.89
PPP4R3A-208ENST00000555462 LARGE1O95461 756 aa20.64■□□□□ 0.89
PPP4R3A-208ENST00000555462 FOSBP53539 338 aa20.64■□□□□ 0.89
PPP4R3A-208ENST00000555462 ZFYVE9O95405 1425 aa20.64■□□□□ 0.89
PPP4R3A-208ENST00000555462 NGDNQ8NEJ9 315 aaKnown RBP20.63■□□□□ 0.89
PPP4R3A-208ENST00000555462 PIK3C2BO00750 1634 aa20.63■□□□□ 0.89
PPP4R3A-208ENST00000555462 RGS12O14924 1447 aa20.63■□□□□ 0.89
PPP4R3A-208ENST00000555462 FAM69CQ0P6D2 419 aa20.63■□□□□ 0.89
PPP4R3A-208ENST00000555462 PDLIM2Q96JY6 352 aa20.63■□□□□ 0.89
PPP4R3A-208ENST00000555462 ADCY5O95622 1261 aa20.62■□□□□ 0.89
PPP4R3A-208ENST00000555462 SRGAP3O43295 1099 aa20.62■□□□□ 0.89
PPP4R3A-208ENST00000555462 PPP1R42Q7Z4L9 355 aa20.62■□□□□ 0.89
PPP4R3A-208ENST00000555462 CCDC39Q9UFE4 941 aa20.62■□□□□ 0.89
PPP4R3A-208ENST00000555462 UBTFL1P0CB47 393 aaPredicted RBP20.61■□□□□ 0.89
PPP4R3A-208ENST00000555462 OSCARQ8IYS5 282 aa20.61■□□□□ 0.89
PPP4R3A-208ENST00000555462 TTC21BQ7Z4L5 1316 aa20.61■□□□□ 0.89
PPP4R3A-208ENST00000555462 NBPF7P0C2Y1 421 aaPredicted RBP20.61■□□□□ 0.89
PPP4R3A-208ENST00000555462 EYA1Q99502 592 aa20.61■□□□□ 0.89
PPP4R3A-208ENST00000555462 LMTK2Q8IWU2 1503 aa20.6■□□□□ 0.89
PPP4R3A-208ENST00000555462 CASTP20810 708 aaKnown RBP20.6■□□□□ 0.89
PPP4R3A-208ENST00000555462 DNM1Q05193 864 aaKnown RBP20.6■□□□□ 0.89
PPP4R3A-208ENST00000555462 USP32Q8NFA0 1604 aa20.6■□□□□ 0.89
PPP4R3A-208ENST00000555462 AK2P54819 239 aa20.6■□□□□ 0.89
PPP4R3A-208ENST00000555462 PA2G4Q9UQ80 394 aaKnown RBP20.6■□□□□ 0.89
PPP4R3A-208ENST00000555462 ARAP3Q8WWN8 1544 aa20.6■□□□□ 0.89
PPP4R3A-208ENST00000555462 CBX1P83916 185 aa20.59■□□□□ 0.89
PPP4R3A-208ENST00000555462 STK3Q13188 491 aa20.59■□□□□ 0.89
PPP4R3A-208ENST00000555462 TCHHQ07283 1943 aa20.59■□□□□ 0.89
PPP4R3A-208ENST00000555462 SPDYE4A6NLX3 237 aa20.59■□□□□ 0.89
PPP4R3A-208ENST00000555462 KCNJ4P48050 445 aa20.59■□□□□ 0.89
PPP4R3A-208ENST00000555462 CEBPAP49715 358 aaPredicted RBP20.59■□□□□ 0.89
PPP4R3A-208ENST00000555462 MBD3O95983 291 aa20.58■□□□□ 0.89
PPP4R3A-208ENST00000555462 CCT4P50991 539 aaKnown RBP20.58■□□□□ 0.89
PPP4R3A-208ENST00000555462 FBXW7Q969H0 707 aa20.58■□□□□ 0.89
PPP4R3A-208ENST00000555462 USP44Q9H0E7 712 aa20.58■□□□□ 0.89
PPP4R3A-208ENST00000555462 KCNQ3O43525 872 aa20.58■□□□□ 0.88
PPP4R3A-208ENST00000555462 NLRP6P59044 892 aa20.58■□□□□ 0.88
PPP4R3A-208ENST00000555462 KIAA2012Q0VF49 1180 aa20.58■□□□□ 0.88
PPP4R3A-208ENST00000555462 HDGFL1Q5TGJ6 251 aa20.57■□□□□ 0.88
PPP4R3A-208ENST00000555462 PTPRCP08575 1304 aa20.57■□□□□ 0.88
PPP4R3A-208ENST00000555462 ADCK5Q3MIX3 580 aa20.57■□□□□ 0.88
PPP4R3A-208ENST00000555462 PRPF40BQ6NWY9 871 aaKnown RBP20.57■□□□□ 0.88
PPP4R3A-208ENST00000555462 TFIP11Q9UBB9 837 aaKnown RBP20.57■□□□□ 0.88
PPP4R3A-208ENST00000555462 ALKQ9UM73 1620 aa20.57■□□□□ 0.88
PPP4R3A-208ENST00000555462 SYT1P21579 422 aa20.57■□□□□ 0.88
PPP4R3A-208ENST00000555462 CKAP2LQ8IYA6 745 aa20.57■□□□□ 0.88
PPP4R3A-208ENST00000555462 MLH3Q9UHC1 1453 aa20.57■□□□□ 0.88
PPP4R3A-208ENST00000555462 SMC3Q9UQE7 1217 aa20.57■□□□□ 0.88
PPP4R3A-208ENST00000555462 ZNF500O60304 480 aaPredicted RBP20.56■□□□□ 0.88
PPP4R3A-208ENST00000555462 TAF7Q15545 349 aaPredicted RBP20.56■□□□□ 0.88
PPP4R3A-208ENST00000555462 SIL1Q9H173 461 aa20.56■□□□□ 0.88
PPP4R3A-208ENST00000555462 SOS1Q07889 1333 aaPredicted RBP20.55■□□□□ 0.88
PPP4R3A-208ENST00000555462 HECW2Q9P2P5 1572 aa20.55■□□□□ 0.88
PPP4R3A-208ENST00000555462 ATP8B2P98198 1209 aa20.55■□□□□ 0.88
PPP4R3A-208ENST00000555462 JAKMIP1Q96N16 626 aaKnown RBP20.55■□□□□ 0.88
PPP4R3A-208ENST00000555462 NDUFB9Q9Y6M9 179 aa20.55■□□□□ 0.88
PPP4R3A-208ENST00000555462 EDC4Q6P2E9 1401 aaKnown RBP20.54■□□□□ 0.88
PPP4R3A-208ENST00000555462 PTH1RQ03431 593 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms