RNA–Protein interactions for RNA: ENST00000533658.5

SOX6-216, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,202 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-216ENST00000533658 CFDP1Q9UEE9 299 aaPredicted RBP9.54□□□□□ -0.88
SOX6-216ENST00000533658 CEP162Q5TB80 1403 aa9.54□□□□□ -0.88
SOX6-216ENST00000533658 CEP170BQ9Y4F5 1589 aaPredicted RBP9.54□□□□□ -0.88
SOX6-216ENST00000533658 SPAG9O60271 1321 aaKnown RBP9.54□□□□□ -0.88
SOX6-216ENST00000533658 CCNB3Q8WWL7 1395 aa9.53□□□□□ -0.88
SOX6-216ENST00000533658 C6orf229H3BNL8 230 aa9.53□□□□□ -0.88
SOX6-216ENST00000533658 MDM2Q00987 491 aaPredicted RBP9.53□□□□□ -0.88
SOX6-216ENST00000533658 MAP2K5Q13163 448 aa9.53□□□□□ -0.88
SOX6-216ENST00000533658 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.53□□□□□ -0.88
SOX6-216ENST00000533658 PTPRKQ15262 1439 aa9.53□□□□□ -0.88
SOX6-216ENST00000533658 ATP7AQ04656 1500 aa9.52□□□□□ -0.88
SOX6-216ENST00000533658 PTSQ03393 145 aa9.52□□□□□ -0.89
SOX6-216ENST00000533658 NR5A1Q13285 461 aa9.52□□□□□ -0.89
SOX6-216ENST00000533658 ARID5BQ14865 1188 aa9.52□□□□□ -0.89
SOX6-216ENST00000533658 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.52□□□□□ -0.89
SOX6-216ENST00000533658 PLA2G4EQ3MJ16 856 aa9.52□□□□□ -0.89
SOX6-216ENST00000533658 INO80Q9ULG1 1556 aaPredicted RBP9.52□□□□□ -0.89
SOX6-216ENST00000533658 PCDHGC3Q9UN70 934 aa9.52□□□□□ -0.89
SOX6-216ENST00000533658 MINK1Q8N4C8 1332 aaPredicted RBP9.52□□□□□ -0.89
SOX6-216ENST00000533658 FDX1P10109 184 aa9.51□□□□□ -0.89
SOX6-216ENST00000533658 GGT6Q6P531 493 aa9.51□□□□□ -0.89
SOX6-216ENST00000533658 CLTCQ00610 1675 aaKnown RBP9.51□□□□□ -0.89
SOX6-216ENST00000533658 MED1Q15648 1581 aaPredicted RBP9.5□□□□□ -0.89
SOX6-216ENST00000533658 BTBD11A6QL63 1104 aa9.5□□□□□ -0.89
SOX6-216ENST00000533658 KRTAP4-12Q9BQ66 201 aa9.5□□□□□ -0.89
SOX6-216ENST00000533658 A2MP01023 1474 aa9.5□□□□□ -0.89
SOX6-216ENST00000533658 TIAM1Q13009 1591 aa9.5□□□□□ -0.89
SOX6-216ENST00000533658 SUPT6HQ7KZ85 1726 aaKnown RBP9.49□□□□□ -0.89
SOX6-216ENST00000533658 IRF6O14896 467 aa9.49□□□□□ -0.89
SOX6-216ENST00000533658 NUTM1Q86Y26 1132 aa9.49□□□□□ -0.89
SOX6-216ENST00000533658 KIAA1107Q9UPP5 1409 aa9.48□□□□□ -0.89
SOX6-216ENST00000533658 SPTLC1O15269 473 aa9.48□□□□□ -0.89
SOX6-216ENST00000533658 KRI1Q8N9T8 703 aaKnown RBP9.48□□□□□ -0.89
SOX6-216ENST00000533658 A2ML1A8K2U0 1454 aa9.47□□□□□ -0.89
SOX6-216ENST00000533658 NEURL4Q96JN8 1562 aa9.47□□□□□ -0.89
SOX6-216ENST00000533658 TTLL8A6PVC2 850 aa9.47□□□□□ -0.89
SOX6-216ENST00000533658 K7ELQ4 463 aaPredicted RBP9.47□□□□□ -0.89
SOX6-216ENST00000533658 ITGB2P05107 769 aa9.47□□□□□ -0.89
SOX6-216ENST00000533658 HSPA1LP34931 641 aa9.47□□□□□ -0.89
SOX6-216ENST00000533658 PLEKHH2Q8IVE3 1493 aa9.47□□□□□ -0.89
SOX6-216ENST00000533658 KANK4Q5T7N3 995 aaPredicted RBP9.46□□□□□ -0.9
SOX6-216ENST00000533658 CCDC155Q8N6L0 562 aa9.46□□□□□ -0.9
SOX6-216ENST00000533658 FOXJ1Q92949 421 aa9.46□□□□□ -0.9
SOX6-216ENST00000533658 TSEN34Q9BSV6 310 aaKnown RBP9.46□□□□□ -0.9
SOX6-216ENST00000533658 KRTAP9-9Q9BYP9 154 aa9.46□□□□□ -0.9
SOX6-216ENST00000533658 KRTAP9-4Q9BYQ2 154 aa9.46□□□□□ -0.9
SOX6-216ENST00000533658 MBD5Q9P267 1494 aa9.46□□□□□ -0.9
SOX6-216ENST00000533658 CPS1P31327 1500 aa9.46□□□□□ -0.9
SOX6-216ENST00000533658 DNMT1P26358 1616 aaKnown RBP9.45□□□□□ -0.9
SOX6-216ENST00000533658 GRM5P41594 1212 aa9.45□□□□□ -0.9
SOX6-216ENST00000533658 PIP4K2BP78356 416 aa9.45□□□□□ -0.9
SOX6-216ENST00000533658 PRR7Q8TB68 274 aa9.45□□□□□ -0.9
SOX6-216ENST00000533658 FAM217BQ9NTX9 383 aaPredicted RBP9.45□□□□□ -0.9
SOX6-216ENST00000533658 NCOA2Q15596 1464 aa9.45□□□□□ -0.9
SOX6-216ENST00000533658 EHBP1L1Q8N3D4 1523 aa9.45□□□□□ -0.9
SOX6-216ENST00000533658 PROCP04070 461 aa9.44□□□□□ -0.9
SOX6-216ENST00000533658 FBXO31Q5XUX0 539 aaPredicted RBP9.44□□□□□ -0.9
SOX6-216ENST00000533658 DESI1Q6ICB0 168 aa9.44□□□□□ -0.9
SOX6-216ENST00000533658 CCDC102AQ96A19 550 aa9.44□□□□□ -0.9
SOX6-216ENST00000533658 SHANK2Q9UPX8 1470 aa9.44□□□□□ -0.9
SOX6-216ENST00000533658 ALKQ9UM73 1620 aa9.44□□□□□ -0.9
SOX6-216ENST00000533658 TNRQ92752 1358 aa9.43□□□□□ -0.9
SOX6-216ENST00000533658 KRTAP4-8A0A0G2JLE6 195 aa9.43□□□□□ -0.9
SOX6-216ENST00000533658 KIF3BO15066 747 aa9.43□□□□□ -0.9
SOX6-216ENST00000533658 GALNT6Q8NCL4 622 aa9.43□□□□□ -0.9
SOX6-216ENST00000533658 DCAF5Q96JK2 942 aa9.43□□□□□ -0.9
SOX6-216ENST00000533658 POLR1AO95602 1720 aaPredicted RBP9.42□□□□□ -0.9
SOX6-216ENST00000533658 ADGBQ8N7X0 1667 aa9.42□□□□□ -0.9
SOX6-216ENST00000533658 VWDEQ8N2E2 1590 aa9.42□□□□□ -0.9
SOX6-216ENST00000533658 PZPP20742 1482 aa9.42□□□□□ -0.9
SOX6-216ENST00000533658 CAMSAP2Q08AD1 1489 aa9.42□□□□□ -0.9
SOX6-216ENST00000533658 TOM1O60784 492 aa9.42□□□□□ -0.9
SOX6-216ENST00000533658 ITGA6P23229 1130 aa9.42□□□□□ -0.9
SOX6-216ENST00000533658 CTHP32929 405 aa9.42□□□□□ -0.9
SOX6-216ENST00000533658 VWA5B2Q8N398 1253 aa9.42□□□□□ -0.9
SOX6-216ENST00000533658 KDM5DQ9BY66 1539 aa9.41□□□□□ -0.9
SOX6-216ENST00000533658 CDC14CA4D256 554 aa9.41□□□□□ -0.9
SOX6-216ENST00000533658 ADAMTS2O95450 1211 aa9.41□□□□□ -0.9
SOX6-216ENST00000533658 MAP3K10Q02779 954 aa9.41□□□□□ -0.9
SOX6-216ENST00000533658 LYPD4Q6UWN0 246 aa9.41□□□□□ -0.9
SOX6-216ENST00000533658 GPCPD1Q9NPB8 672 aa9.41□□□□□ -0.9
SOX6-216ENST00000533658 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.4□□□□□ -0.9
SOX6-216ENST00000533658 SLC35F4A4IF30 521 aa9.4□□□□□ -0.9
SOX6-216ENST00000533658 FIGNL2A6NMB9 653 aa9.4□□□□□ -0.9
SOX6-216ENST00000533658 CLCN1P35523 988 aa9.4□□□□□ -0.9
SOX6-216ENST00000533658 C4orf48Q5BLP8 95 aa9.4□□□□□ -0.9
SOX6-216ENST00000533658 SV2AQ7L0J3 742 aa9.4□□□□□ -0.9
SOX6-216ENST00000533658 FAM135AQ9P2D6 1515 aa9.4□□□□□ -0.91
SOX6-216ENST00000533658 RTEL1-TNFRSF6BF6WH68 1400 aa9.39□□□□□ -0.91
SOX6-216ENST00000533658 VPS8Q8N3P4 1428 aa9.39□□□□□ -0.91
SOX6-216ENST00000533658 DHX29Q7Z478 1369 aaKnown RBP9.39□□□□□ -0.91
SOX6-216ENST00000533658 FSHRP23945 695 aa9.39□□□□□ -0.91
SOX6-216ENST00000533658 BARGINQ6ZT62 677 aa9.39□□□□□ -0.91
SOX6-216ENST00000533658 ZC3H15Q8WU90 426 aaKnown RBP9.39□□□□□ -0.91
SOX6-216ENST00000533658 MED14O60244 1454 aa9.39□□□□□ -0.91
SOX6-216ENST00000533658 CCDC141Q6ZP82 1450 aa9.39□□□□□ -0.91
SOX6-216ENST00000533658 LRRC9Q6ZRR7 1453 aa9.39□□□□□ -0.91
SOX6-216ENST00000533658 NPHP4O75161 1426 aaPredicted RBP9.39□□□□□ -0.91
SOX6-216ENST00000533658 NLRP1Q9C000 1473 aa9.38□□□□□ -0.91
SOX6-216ENST00000533658 DEPDC5O75140 1603 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms