RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 SETD1BQ9UPS6 1966 aaKnown RBP8.17□□□□□ -1.1
TGFBR3-209ENST00000532540 KIAA0232Q92628 1395 aa8.17□□□□□ -1.1
TGFBR3-209ENST00000532540 HOXC9P31274 260 aa8.16□□□□□ -1.1
TGFBR3-209ENST00000532540 CCDC112Q8NEF3 446 aa8.16□□□□□ -1.1
TGFBR3-209ENST00000532540 ZFP91Q96JP5 570 aaPredicted RBP8.16□□□□□ -1.1
TGFBR3-209ENST00000532540 AXIN2Q9Y2T1 843 aa8.16□□□□□ -1.1
TGFBR3-209ENST00000532540 CHMP3Q9Y3E7 222 aa8.16□□□□□ -1.1
TGFBR3-209ENST00000532540 MYL6BP14649 208 aa8.16□□□□□ -1.1
TGFBR3-209ENST00000532540 ZRSR1Q15695 479 aaKnown RBP8.16□□□□□ -1.1
TGFBR3-209ENST00000532540 MYRIPQ8NFW9 859 aa8.16□□□□□ -1.1
TGFBR3-209ENST00000532540 ERBB4Q15303 1308 aa8.16□□□□□ -1.1
TGFBR3-209ENST00000532540 FER1L4A9Z1Z3 1794 aa8.16□□□□□ -1.1
TGFBR3-209ENST00000532540 CEP170BQ9Y4F5 1589 aaPredicted RBP8.16□□□□□ -1.1
TGFBR3-209ENST00000532540 GABPB1Q06547 395 aaPredicted RBP8.15□□□□□ -1.1
TGFBR3-209ENST00000532540 ARGLU1Q9NWB6 273 aaPredicted RBP8.15□□□□□ -1.1
TGFBR3-209ENST00000532540 ALKQ9UM73 1620 aa8.15□□□□□ -1.1
TGFBR3-209ENST00000532540 ZNF500O60304 480 aaPredicted RBP8.15□□□□□ -1.1
TGFBR3-209ENST00000532540 KRT24Q2M2I5 525 aa8.15□□□□□ -1.1
TGFBR3-209ENST00000532540 GPATCH11Q8N954 259 aa8.15□□□□□ -1.1
TGFBR3-209ENST00000532540 PPP1R9BQ96SB3 815 aa8.15□□□□□ -1.1
TGFBR3-209ENST00000532540 OGFRQ9NZT2 677 aa8.15□□□□□ -1.1
TGFBR3-209ENST00000532540 SRCAPQ6ZRS2 3230 aa8.15□□□□□ -1.1
TGFBR3-209ENST00000532540 ADGRB3O60242 1522 aa8.15□□□□□ -1.11
TGFBR3-209ENST00000532540 RBM25P49756 843 aaKnown RBP8.15□□□□□ -1.11
TGFBR3-209ENST00000532540 ITPRIPQ8IWB1 547 aa8.15□□□□□ -1.11
TGFBR3-209ENST00000532540 STK31Q9BXU1 1019 aa8.15□□□□□ -1.11
TGFBR3-209ENST00000532540 QTRT2Q9H974 415 aaKnown RBP8.15□□□□□ -1.11
TGFBR3-209ENST00000532540 ADGRL3Q9HAR2 1447 aa8.15□□□□□ -1.11
TGFBR3-209ENST00000532540 MROH1Q8NDA8 1641 aa8.15□□□□□ -1.11
TGFBR3-209ENST00000532540 PDE3AQ14432 1141 aa8.14□□□□□ -1.11
TGFBR3-209ENST00000532540 BICDL1Q6ZP65 573 aa8.14□□□□□ -1.11
TGFBR3-209ENST00000532540 PANK1Q8TE04 598 aa8.14□□□□□ -1.11
TGFBR3-209ENST00000532540 BCORL1Q5H9F3 1711 aa8.14□□□□□ -1.11
TGFBR3-209ENST00000532540 EXOSC9Q06265 439 aaKnown RBP8.14□□□□□ -1.11
TGFBR3-209ENST00000532540 DDB1Q16531 1140 aa8.14□□□□□ -1.11
TGFBR3-209ENST00000532540 AXDND1Q5T1B0 1012 aaPredicted RBP8.14□□□□□ -1.11
TGFBR3-209ENST00000532540 KRT222Q8N1A0 295 aa8.14□□□□□ -1.11
TGFBR3-209ENST00000532540 KIF1BO60333 1816 aa8.14□□□□□ -1.11
TGFBR3-209ENST00000532540 ADAMTSL3P82987 1691 aa8.14□□□□□ -1.11
TGFBR3-209ENST00000532540 ZFYVE9O95405 1425 aa8.14□□□□□ -1.11
TGFBR3-209ENST00000532540 K7ELQ4 463 aaPredicted RBP8.14□□□□□ -1.11
TGFBR3-209ENST00000532540 MCCP23508 829 aa8.14□□□□□ -1.11
TGFBR3-209ENST00000532540 TMPOP42166 694 aaKnown RBP8.14□□□□□ -1.11
TGFBR3-209ENST00000532540 CTR9Q6PD62 1173 aa8.14□□□□□ -1.11
TGFBR3-209ENST00000532540 DHX37Q8IY37 1157 aaKnown RBP8.14□□□□□ -1.11
TGFBR3-209ENST00000532540 SPHKAPQ2M3C7 1700 aa8.14□□□□□ -1.11
TGFBR3-209ENST00000532540 SYCE3A1L190 88 aa8.13□□□□□ -1.11
TGFBR3-209ENST00000532540 NOLC1Q14978 699 aaKnown RBP eCLIP8.13□□□□□ -1.115e-7■■□□□ 13.4
TGFBR3-209ENST00000532540 SPG7Q9UQ90 795 aa8.13□□□□□ -1.11
TGFBR3-209ENST00000532540 TTC21AQ8NDW8 1320 aa8.13□□□□□ -1.11
TGFBR3-209ENST00000532540 LMTK2Q8IWU2 1503 aa8.13□□□□□ -1.11
TGFBR3-209ENST00000532540 SF3B2Q13435 895 aaKnown RBP8.13□□□□□ -1.11
TGFBR3-209ENST00000532540 FAM184AQ8NB25 1140 aa8.13□□□□□ -1.11
TGFBR3-209ENST00000532540 HDAC5Q9UQL6 1122 aa8.13□□□□□ -1.11
TGFBR3-209ENST00000532540 TPM4P67936 248 aa8.13□□□□□ -1.11
TGFBR3-209ENST00000532540 CERS3Q8IU89 383 aa8.13□□□□□ -1.11
TGFBR3-209ENST00000532540 GTF2F1P35269 517 aaKnown RBP eCLIP8.12□□□□□ -1.112e-6■□□□□ 9.9
TGFBR3-209ENST00000532540 TPD52L1Q16890 204 aaPredicted RBP8.12□□□□□ -1.11
TGFBR3-209ENST00000532540 MTHFSDQ2M296 383 aaKnown RBP8.12□□□□□ -1.11
TGFBR3-209ENST00000532540 FOXD4L6Q3SYB3 417 aaPredicted RBP8.12□□□□□ -1.11
TGFBR3-209ENST00000532540 FOXD4L3Q6VB84 417 aaPredicted RBP8.12□□□□□ -1.11
TGFBR3-209ENST00000532540 BTBD11A6QL63 1104 aa8.12□□□□□ -1.11
TGFBR3-209ENST00000532540 LMOD3Q0VAK6 560 aa8.12□□□□□ -1.11
TGFBR3-209ENST00000532540 NFATC2IPQ8NCF5 419 aa8.12□□□□□ -1.11
TGFBR3-209ENST00000532540 GAS2L2Q8NHY3 880 aa8.12□□□□□ -1.11
TGFBR3-209ENST00000532540 AK7Q96M32 723 aa8.12□□□□□ -1.11
TGFBR3-209ENST00000532540 CCDC85AQ96PX6 553 aaPredicted RBP8.12□□□□□ -1.11
TGFBR3-209ENST00000532540 U2AF2P26368 475 aaKnown RBP eCLIP8.12□□□□□ -1.117e-7■■■□□ 17
TGFBR3-209ENST00000532540 SSFA2P28290 1259 aa8.12□□□□□ -1.11
TGFBR3-209ENST00000532540 FKBP5Q13451 457 aaPredicted RBP8.12□□□□□ -1.11
TGFBR3-209ENST00000532540 WWC1Q8IX03 1113 aa8.12□□□□□ -1.11
TGFBR3-209ENST00000532540 ZCRB1Q8TBF4 217 aaKnown RBP8.12□□□□□ -1.11
TGFBR3-209ENST00000532540 PREX1Q8TCU6 1659 aa8.12□□□□□ -1.11
TGFBR3-209ENST00000532540 IP6K1Q92551 441 aa8.12□□□□□ -1.11
TGFBR3-209ENST00000532540 EIF2AK4Q9P2K8 1649 aaKnown RBP8.12□□□□□ -1.11
TGFBR3-209ENST00000532540 TEX2Q8IWB9 1127 aa8.11□□□□□ -1.11
TGFBR3-209ENST00000532540 LGR6Q9HBX8 967 aa8.11□□□□□ -1.11
TGFBR3-209ENST00000532540 IPO8O15397 1037 aaKnown RBP8.11□□□□□ -1.11
TGFBR3-209ENST00000532540 LEKR1Q6ZMV7 388 aa8.11□□□□□ -1.11
TGFBR3-209ENST00000532540 NEXMIFQ5QGS0 1516 aa8.11□□□□□ -1.11
TGFBR3-209ENST00000532540 GNAT3A8MTJ3 354 aa8.11□□□□□ -1.11
TGFBR3-209ENST00000532540 BCAR3O75815 825 aa8.11□□□□□ -1.11
TGFBR3-209ENST00000532540 FCHSD2O94868 740 aa8.11□□□□□ -1.11
TGFBR3-209ENST00000532540 BAG4O95429 457 aaKnown RBP8.11□□□□□ -1.11
TGFBR3-209ENST00000532540 SEC24BO95487 1268 aa8.11□□□□□ -1.11
TGFBR3-209ENST00000532540 ZSCAN23Q3MJ62 389 aa8.11□□□□□ -1.11
TGFBR3-209ENST00000532540 SIRT1Q96EB6 747 aa8.11□□□□□ -1.11
TGFBR3-209ENST00000532540 TMOD3Q9NYL9 352 aa8.11□□□□□ -1.11
TGFBR3-209ENST00000532540 MYOM2P54296 1465 aa8.11□□□□□ -1.11
TGFBR3-209ENST00000532540 SPATA31A3Q5VYP0 1347 aa8.11□□□□□ -1.11
TGFBR3-209ENST00000532540 IL2RBP14784 551 aa8.1□□□□□ -1.11
TGFBR3-209ENST00000532540 ZSCAN20P17040 1043 aaPredicted RBP8.1□□□□□ -1.11
TGFBR3-209ENST00000532540 GAS2L3Q86XJ1 694 aa8.1□□□□□ -1.11
TGFBR3-209ENST00000532540 JARID2Q92833 1246 aaPredicted RBP8.1□□□□□ -1.11
TGFBR3-209ENST00000532540 ZNF830Q96NB3 372 aaPredicted RBP8.1□□□□□ -1.11
TGFBR3-209ENST00000532540 NOL10Q9BSC4 688 aaKnown RBP8.1□□□□□ -1.11
TGFBR3-209ENST00000532540 RASSF4Q9H2L5 321 aa8.1□□□□□ -1.11
TGFBR3-209ENST00000532540 SIGLEC1Q9BZZ2 1709 aa8.1□□□□□ -1.11
TGFBR3-209ENST00000532540 SPATA31D1Q6ZQQ2 1576 aa8.1□□□□□ -1.11
TGFBR3-209ENST00000532540 PRIM1P49642 420 aaKnown RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms