RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 SF3A1Q15459 793 aaKnown RBP10.08□□□□□ -0.8
CLK4-202ENST00000519132 SLC39A7Q92504 469 aa10.08□□□□□ -0.8
CLK4-202ENST00000519132 PCDHGA11Q9Y5H2 935 aa10.08□□□□□ -0.8
CLK4-202ENST00000519132 DOLKQ9UPQ8 538 aa10.07□□□□□ -0.8
CLK4-202ENST00000519132 FHOD3Q2V2M9 1422 aa10.07□□□□□ -0.8
CLK4-202ENST00000519132 CARMIL2Q6F5E8 1435 aa10.07□□□□□ -0.8
CLK4-202ENST00000519132 GRIPAP1Q4V328 841 aa10.07□□□□□ -0.8
CLK4-202ENST00000519132 ZNF394Q53GI3 561 aa10.07□□□□□ -0.8
CLK4-202ENST00000519132 FAM26DQ5JW98 314 aa10.07□□□□□ -0.8
CLK4-202ENST00000519132 DESI1Q6ICB0 168 aa10.07□□□□□ -0.8
CLK4-202ENST00000519132 VTI1AQ96AJ9 217 aa10.07□□□□□ -0.8
CLK4-202ENST00000519132 CHIC2Q9UKJ5 165 aa10.07□□□□□ -0.8
CLK4-202ENST00000519132 USB1Q9BQ65 265 aaKnown RBP10.07□□□□□ -0.8
CLK4-202ENST00000519132 EGFL7Q9UHF1 273 aa10.07□□□□□ -0.8
CLK4-202ENST00000519132 NOD1Q9Y239 953 aa10.07□□□□□ -0.8
CLK4-202ENST00000519132 MAP3K1Q13233 1512 aa10.06□□□□□ -0.8
CLK4-202ENST00000519132 FYCO1Q9BQS8 1478 aa10.06□□□□□ -0.8
CLK4-202ENST00000519132 RAB15P59190 212 aa10.06□□□□□ -0.8
CLK4-202ENST00000519132 PCF11O94913 1555 aaKnown RBP10.06□□□□□ -0.8
CLK4-202ENST00000519132 LARGE2Q8N3Y3 721 aa10.06□□□□□ -0.8
CLK4-202ENST00000519132 SBNO2Q9Y2G9 1366 aa10.06□□□□□ -0.8
CLK4-202ENST00000519132 DMRTA1Q5VZB9 504 aa10.05□□□□□ -0.8
CLK4-202ENST00000519132 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.05□□□□□ -0.8
CLK4-202ENST00000519132 TMC1Q8TDI8 760 aa10.05□□□□□ -0.8
CLK4-202ENST00000519132 CASKIN1Q8WXD9 1431 aa10.05□□□□□ -0.8
CLK4-202ENST00000519132 ATCAYQ86WG3 371 aa10.05□□□□□ -0.8
CLK4-202ENST00000519132 ZSCAN29Q8IWY8 852 aaPredicted RBP10.05□□□□□ -0.8
CLK4-202ENST00000519132 GPR182O15218 404 aa10.04□□□□□ -0.8
CLK4-202ENST00000519132 RAB11FIP3O75154 756 aa10.04□□□□□ -0.8
CLK4-202ENST00000519132 CFAP43Q8NDM7 1665 aa10.04□□□□□ -0.8
CLK4-202ENST00000519132 TBCELQ5QJ74 424 aa10.03□□□□□ -0.8
CLK4-202ENST00000519132 LDHBP07195 334 aaKnown RBP10.03□□□□□ -0.8
CLK4-202ENST00000519132 SCTRP47872 440 aa10.03□□□□□ -0.8
CLK4-202ENST00000519132 ANKRD13AQ8IZ07 590 aa10.03□□□□□ -0.8
CLK4-202ENST00000519132 PRG4Q92954 1404 aaPredicted RBP10.03□□□□□ -0.8
CLK4-202ENST00000519132 WEE1P30291 646 aa10.02□□□□□ -0.8
CLK4-202ENST00000519132 LRRIQ1Q96JM4 1722 aa10.02□□□□□ -0.8
CLK4-202ENST00000519132 HECW1Q76N89 1606 aa10.02□□□□□ -0.8
CLK4-202ENST00000519132 TREHO43280 583 aa10.02□□□□□ -0.81
CLK4-202ENST00000519132 IGHA2P01877 340 aa10.02□□□□□ -0.81
CLK4-202ENST00000519132 EMILIN1Q9Y6C2 1016 aa10.02□□□□□ -0.81
CLK4-202ENST00000519132 RAPGEF6Q8TEU7 1601 aa10.01□□□□□ -0.81
CLK4-202ENST00000519132 ZBTB39O15060 712 aa10.01□□□□□ -0.81
CLK4-202ENST00000519132 TIAM1Q13009 1591 aa10.01□□□□□ -0.81
CLK4-202ENST00000519132 ATP1A2P50993 1020 aa10.01□□□□□ -0.81
CLK4-202ENST00000519132 PTCRAQ6ISU1 281 aaPredicted RBP10.01□□□□□ -0.81
CLK4-202ENST00000519132 SCUBE3Q8IX30 993 aa10.01□□□□□ -0.81
CLK4-202ENST00000519132 MARCH6O60337 910 aa10□□□□□ -0.81
CLK4-202ENST00000519132 DMGDHQ9UI17 866 aaKnown RBP10□□□□□ -0.81
CLK4-202ENST00000519132 RACK1P63244 317 aaKnown RBP10□□□□□ -0.81
CLK4-202ENST00000519132 BRICD5Q6PL45 260 aa10□□□□□ -0.81
CLK4-202ENST00000519132 ARHGAP9Q9BRR9 750 aa10□□□□□ -0.81
CLK4-202ENST00000519132 ZSWIM4Q9H7M6 989 aa10□□□□□ -0.81
CLK4-202ENST00000519132 VTI1BQ9UEU0 232 aa10□□□□□ -0.81
CLK4-202ENST00000519132 ZC3H4Q9UPT8 1303 aaKnown RBP10□□□□□ -0.81
CLK4-202ENST00000519132 ABCA8O94911 1581 aa9.99□□□□□ -0.81
CLK4-202ENST00000519132 DOK7Q18PE1 504 aa9.99□□□□□ -0.81
CLK4-202ENST00000519132 PPP1R18Q6NYC8 613 aa9.99□□□□□ -0.81
CLK4-202ENST00000519132 EHHADHQ08426 723 aa9.99□□□□□ -0.81
CLK4-202ENST00000519132 ERCC6L2Q5T890 1561 aa9.99□□□□□ -0.81
CLK4-202ENST00000519132 CCDC18Q5T9S5 1454 aa9.99□□□□□ -0.81
CLK4-202ENST00000519132 CERS3Q8IU89 383 aa9.99□□□□□ -0.81
CLK4-202ENST00000519132 XPCQ01831 940 aaPredicted RBP9.98□□□□□ -0.81
CLK4-202ENST00000519132 MICAL1Q8TDZ2 1067 aa9.98□□□□□ -0.81
CLK4-202ENST00000519132 THAP11Q96EK4 314 aa9.98□□□□□ -0.81
CLK4-202ENST00000519132 RABGEF1Q9UJ41 708 aa9.98□□□□□ -0.81
CLK4-202ENST00000519132 FMR1Q06787 632 aaKnown RBP eCLIP9.98□□□□□ -0.81
CLK4-202ENST00000519132 FAM98CQ17RN3 349 aaKnown RBP9.98□□□□□ -0.81
CLK4-202ENST00000519132 JAZF1Q86VZ6 243 aa9.98□□□□□ -0.81
CLK4-202ENST00000519132 TRIM50Q86XT4 487 aa9.98□□□□□ -0.81
CLK4-202ENST00000519132 MRS2Q9HD23 443 aa9.98□□□□□ -0.81
CLK4-202ENST00000519132 PTK2Q05397 1052 aa9.98□□□□□ -0.81
CLK4-202ENST00000519132 BMS1Q14692 1282 aaKnown RBP9.98□□□□□ -0.81
CLK4-202ENST00000519132 TCEAL1Q15170 157 aa9.98□□□□□ -0.81
CLK4-202ENST00000519132 C4orf48Q5BLP8 95 aa9.98□□□□□ -0.81
CLK4-202ENST00000519132 HELQQ8TDG4 1101 aa9.98□□□□□ -0.81
CLK4-202ENST00000519132 MAP7D1Q3KQU3 841 aa9.97□□□□□ -0.81
CLK4-202ENST00000519132 TNS4Q8IZW8 715 aa9.97□□□□□ -0.81
CLK4-202ENST00000519132 KLHL42Q9P2K6 505 aa9.97□□□□□ -0.81
CLK4-202ENST00000519132 AAMPQ13685 434 aa9.97□□□□□ -0.81
CLK4-202ENST00000519132 CCSER2Q9H7U1 834 aa9.97□□□□□ -0.81
CLK4-202ENST00000519132 PTPRNQ16849 979 aa9.96□□□□□ -0.81
CLK4-202ENST00000519132 ZBTB33Q86T24 672 aa9.96□□□□□ -0.81
CLK4-202ENST00000519132 NUDT12Q9BQG2 462 aa9.96□□□□□ -0.81
CLK4-202ENST00000519132 LZTS3O60299 673 aaPredicted RBP9.96□□□□□ -0.82
CLK4-202ENST00000519132 MRPL42Q9Y6G3 142 aaKnown RBP9.96□□□□□ -0.82
CLK4-202ENST00000519132 POTEB2H3BUK9 544 aa9.96□□□□□ -0.82
CLK4-202ENST00000519132 FZD6O60353 706 aa9.96□□□□□ -0.82
CLK4-202ENST00000519132 SORBS3O60504 671 aa9.96□□□□□ -0.82
CLK4-202ENST00000519132 CTSHP09668 335 aa9.96□□□□□ -0.82
CLK4-202ENST00000519132 ATP2B1P20020 1258 aa9.96□□□□□ -0.82
CLK4-202ENST00000519132 APLP1P51693 650 aa9.96□□□□□ -0.82
CLK4-202ENST00000519132 PDXDC2PQ6P474 469 aa9.96□□□□□ -0.82
CLK4-202ENST00000519132 NKX2-3Q8TAU0 364 aa9.96□□□□□ -0.82
CLK4-202ENST00000519132 SPACA7Q96KW9 195 aa9.96□□□□□ -0.82
CLK4-202ENST00000519132 PTPRGP23470 1445 aa9.95□□□□□ -0.82
CLK4-202ENST00000519132 EPRSP07814 1512 aaKnown RBP9.95□□□□□ -0.82
CLK4-202ENST00000519132 NUP153P49790 1475 aaKnown RBP9.95□□□□□ -0.82
CLK4-202ENST00000519132 ARID4BQ4LE39 1312 aaPredicted RBP9.95□□□□□ -0.82
CLK4-202ENST00000519132 EIF1AXP47813 144 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms