RNA–Protein interactions for RNA: ENST00000472318.1

SCAF4-205, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 3

Gene SCAF4, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-205ENST00000472318 LTBP4Q8N2S1 1624 aa11.61□□□□□ -0.55
SCAF4-205ENST00000472318 INSM1Q01101 510 aaPredicted RBP11.61□□□□□ -0.55
SCAF4-205ENST00000472318 TMPRSS4Q9NRS4 437 aa11.61□□□□□ -0.55
SCAF4-205ENST00000472318 UGGT2Q9NYU1 1516 aa11.6□□□□□ -0.55
SCAF4-205ENST00000472318 TTLL8A6PVC2 850 aa11.6□□□□□ -0.55
SCAF4-205ENST00000472318 ERVH48-1M5A8F1 160 aa11.6□□□□□ -0.55
SCAF4-205ENST00000472318 VSIG8P0DPA2 414 aa11.6□□□□□ -0.55
SCAF4-205ENST00000472318 MLECQ14165 292 aa11.6□□□□□ -0.55
SCAF4-205ENST00000472318 STRCQ7RTU9 1775 aa11.59□□□□□ -0.55
SCAF4-205ENST00000472318 GMPRP36959 345 aa11.59□□□□□ -0.55
SCAF4-205ENST00000472318 RAB15P59190 212 aa11.59□□□□□ -0.55
SCAF4-205ENST00000472318 NDUFB9Q9Y6M9 179 aa11.59□□□□□ -0.55
SCAF4-205ENST00000472318 KIAA0556O60303 1618 aa11.59□□□□□ -0.55
SCAF4-205ENST00000472318 LILRA1O75019 489 aa11.58□□□□□ -0.56
SCAF4-205ENST00000472318 CEBPAP49715 358 aaPredicted RBP11.58□□□□□ -0.56
SCAF4-205ENST00000472318 PTPRTO14522 1441 aa11.58□□□□□ -0.56
SCAF4-205ENST00000472318 IQSEC2Q5JU85 1478 aa11.57□□□□□ -0.56
SCAF4-205ENST00000472318 ARHGEF40Q8TER5 1519 aa11.57□□□□□ -0.56
SCAF4-205ENST00000472318 ARID3CA6NKF2 412 aa11.57□□□□□ -0.56
SCAF4-205ENST00000472318 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.57□□□□□ -0.56
SCAF4-205ENST00000472318 AGBL1Q96MI9 1066 aa11.57□□□□□ -0.56
SCAF4-205ENST00000472318 SNRKQ9NRH2 765 aa11.57□□□□□ -0.56
SCAF4-205ENST00000472318 PCDHB9Q9Y5E1 797 aa11.57□□□□□ -0.56
SCAF4-205ENST00000472318 NEO1Q92859 1461 aa11.57□□□□□ -0.56
SCAF4-205ENST00000472318 UBAP1LF5GYI3 381 aa11.56□□□□□ -0.56
SCAF4-205ENST00000472318 APBB1O00213 710 aa11.56□□□□□ -0.56
SCAF4-205ENST00000472318 ADH1AP07327 375 aa11.56□□□□□ -0.56
SCAF4-205ENST00000472318 NR1H3Q13133 447 aa11.56□□□□□ -0.56
SCAF4-205ENST00000472318 POGZQ7Z3K3 1410 aa11.56□□□□□ -0.56
SCAF4-205ENST00000472318 SIGLEC1Q9BZZ2 1709 aa11.55□□□□□ -0.56
SCAF4-205ENST00000472318 ABCA8O94911 1581 aa11.55□□□□□ -0.56
SCAF4-205ENST00000472318 PPFIA3O75145 1194 aa11.55□□□□□ -0.56
SCAF4-205ENST00000472318 RELBQ01201 579 aa11.55□□□□□ -0.56
SCAF4-205ENST00000472318 STK17AQ9UEE5 414 aa11.55□□□□□ -0.56
SCAF4-205ENST00000472318 MED1Q15648 1581 aaPredicted RBP11.54□□□□□ -0.56
SCAF4-205ENST00000472318 ADD1P35611 737 aaKnown RBP11.54□□□□□ -0.56
SCAF4-205ENST00000472318 TTC37Q6PGP7 1564 aa11.54□□□□□ -0.56
SCAF4-205ENST00000472318 FANCAO15360 1455 aa11.53□□□□□ -0.56
SCAF4-205ENST00000472318 GIGYF1O75420 1035 aaPredicted RBP11.53□□□□□ -0.56
SCAF4-205ENST00000472318 CTSOP43234 321 aaPredicted RBP11.53□□□□□ -0.56
SCAF4-205ENST00000472318 RANGAP1P46060 587 aaPredicted RBP11.53□□□□□ -0.56
SCAF4-205ENST00000472318 KDF1Q8NAX2 398 aaPredicted RBP11.53□□□□□ -0.56
SCAF4-205ENST00000472318 INSM2Q96T92 566 aaPredicted RBP11.53□□□□□ -0.56
SCAF4-205ENST00000472318 AKNAQ7Z591 1439 aa11.52□□□□□ -0.56
SCAF4-205ENST00000472318 MCCD1P59942 119 aaPredicted RBP11.52□□□□□ -0.57
SCAF4-205ENST00000472318 CCDC125Q86Z20 511 aa11.52□□□□□ -0.57
SCAF4-205ENST00000472318 ABCA9Q8IUA7 1624 aa11.51□□□□□ -0.57
SCAF4-205ENST00000472318 HSPA1LP34931 641 aa11.51□□□□□ -0.57
SCAF4-205ENST00000472318 PTSQ03393 145 aa11.51□□□□□ -0.57
SCAF4-205ENST00000472318 ZNF592Q92610 1267 aa11.51□□□□□ -0.57
SCAF4-205ENST00000472318 TRIM52Q96A61 297 aa11.51□□□□□ -0.57
SCAF4-205ENST00000472318 CYLDQ9NQC7 956 aa11.51□□□□□ -0.57
SCAF4-205ENST00000472318 PREX1Q8TCU6 1659 aa11.51□□□□□ -0.57
SCAF4-205ENST00000472318 DENND4BO75064 1496 aaPredicted RBP11.51□□□□□ -0.57
SCAF4-205ENST00000472318 FIGNL2A6NMB9 653 aa11.5□□□□□ -0.57
SCAF4-205ENST00000472318 LORP23490 312 aaPredicted RBP11.5□□□□□ -0.57
SCAF4-205ENST00000472318 RNF217Q8TC41 542 aa11.5□□□□□ -0.57
SCAF4-205ENST00000472318 FHOD3Q2V2M9 1422 aa11.5□□□□□ -0.57
SCAF4-205ENST00000472318 UHRF1BP1Q6BDS2 1440 aa11.5□□□□□ -0.57
SCAF4-205ENST00000472318 ATP10BO94823 1461 aa11.5□□□□□ -0.57
SCAF4-205ENST00000472318 PTGIRP43119 386 aa11.49□□□□□ -0.57
SCAF4-205ENST00000472318 ZNF395Q9H8N7 513 aaPredicted RBP11.49□□□□□ -0.57
SCAF4-205ENST00000472318 ZNF330Q9Y3S2 320 aaPredicted RBP11.49□□□□□ -0.57
SCAF4-205ENST00000472318 RNF20Q5VTR2 975 aa11.48□□□□□ -0.57
SCAF4-205ENST00000472318 POLMQ9NP87 494 aaPredicted RBP11.48□□□□□ -0.57
SCAF4-205ENST00000472318 ARHGEF12Q9NZN5 1544 aa11.48□□□□□ -0.57
SCAF4-205ENST00000472318 ZNF335Q9H4Z2 1342 aaPredicted RBP11.47□□□□□ -0.57
SCAF4-205ENST00000472318 ERVK-9P63128 1117 aa11.47□□□□□ -0.57
SCAF4-205ENST00000472318 FOXD4L5Q5VV16 416 aaPredicted RBP11.47□□□□□ -0.57
SCAF4-205ENST00000472318 FER1L4A9Z1Z3 1794 aa11.46□□□□□ -0.57
SCAF4-205ENST00000472318 SLC35F4A4IF30 521 aa11.46□□□□□ -0.57
SCAF4-205ENST00000472318 TBC1D2BQ9UPU7 963 aa11.46□□□□□ -0.57
SCAF4-205ENST00000472318 ZFYVE16Q7Z3T8 1539 aa11.45□□□□□ -0.58
SCAF4-205ENST00000472318 CCDC155Q8N6L0 562 aa11.45□□□□□ -0.58
SCAF4-205ENST00000472318 ZSCAN1Q8NBB4 408 aa11.45□□□□□ -0.58
SCAF4-205ENST00000472318 RICTORQ6R327 1708 aa11.44□□□□□ -0.58
SCAF4-205ENST00000472318 ATP5J2-PTCD1G3V325 749 aa11.44□□□□□ -0.58
SCAF4-205ENST00000472318 SUPT5HO00267 1087 aaKnown RBP11.44□□□□□ -0.58
SCAF4-205ENST00000472318 NCOA1Q15788 1441 aa11.43□□□□□ -0.58
SCAF4-205ENST00000472318 CC2D2BQ6DHV5 1058 aa11.43□□□□□ -0.58
SCAF4-205ENST00000472318 ZMYM4Q5VZL5 1548 aa11.43□□□□□ -0.58
SCAF4-205ENST00000472318 RAPGEF2Q9Y4G8 1499 aa11.43□□□□□ -0.58
SCAF4-205ENST00000472318 SENP3-EIF4A1A0A087X0R7 540 aa11.42□□□□□ -0.58
SCAF4-205ENST00000472318 PIP4K2BP78356 416 aa11.42□□□□□ -0.58
SCAF4-205ENST00000472318 TMEM132AQ24JP5 1023 aa11.42□□□□□ -0.58
SCAF4-205ENST00000472318 NANOS1Q8WY41 292 aaKnown RBP11.42□□□□□ -0.58
SCAF4-205ENST00000472318 EFCAB5A4FU69 1503 aa11.41□□□□□ -0.58
SCAF4-205ENST00000472318 SCTRP47872 440 aa11.41□□□□□ -0.58
SCAF4-205ENST00000472318 GOLGA3Q08378 1498 aa11.4□□□□□ -0.58
SCAF4-205ENST00000472318 MAGI2Q86UL8 1455 aa11.4□□□□□ -0.58
SCAF4-205ENST00000472318 ITGA6P23229 1130 aa11.4□□□□□ -0.58
SCAF4-205ENST00000472318 RNF144AP50876 292 aaPredicted RBP11.4□□□□□ -0.58
SCAF4-205ENST00000472318 IRF5Q13568 498 aa11.4□□□□□ -0.58
SCAF4-205ENST00000472318 PRM3Q9NNZ6 103 aa11.4□□□□□ -0.58
SCAF4-205ENST00000472318 PCDHB11Q9Y5F2 797 aa11.4□□□□□ -0.58
SCAF4-205ENST00000472318 SRCAPQ6ZRS2 3230 aa11.4□□□□□ -0.58
SCAF4-205ENST00000472318 TRAK2O60296 914 aa11.39□□□□□ -0.59
SCAF4-205ENST00000472318 LYSMD3Q7Z3D4 306 aa11.39□□□□□ -0.59
SCAF4-205ENST00000472318 RGS17Q9UGC6 210 aaPredicted RBP11.39□□□□□ -0.59
SCAF4-205ENST00000472318 HECW1Q76N89 1606 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms