RNA–Protein interactions for RNA: ENST00000415828.5

CSTF1-202, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 2

Gene CSTF1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-202ENST00000415828 GJD4Q96KN9 370 aaPredicted RBP9.22□□□□□ -0.93
CSTF1-202ENST00000415828 PGPEP1Q9NXJ5 209 aa9.22□□□□□ -0.93
CSTF1-202ENST00000415828 APBB1O00213 710 aa9.21□□□□□ -0.94
CSTF1-202ENST00000415828 CBLBQ13191 982 aa9.21□□□□□ -0.94
CSTF1-202ENST00000415828 INTS6LQ5JSJ4 861 aaKnown RBP9.21□□□□□ -0.94
CSTF1-202ENST00000415828 DZIP3Q86Y13 1208 aaKnown RBP9.21□□□□□ -0.94
CSTF1-202ENST00000415828 MAN1A2O60476 641 aa9.2□□□□□ -0.94
CSTF1-202ENST00000415828 RAB15P59190 212 aa9.2□□□□□ -0.94
CSTF1-202ENST00000415828 SLC16A10Q8TF71 515 aa9.2□□□□□ -0.94
CSTF1-202ENST00000415828 DHX9Q08211 1270 aaKnown RBP9.19□□□□□ -0.94
CSTF1-202ENST00000415828 MCM6Q14566 821 aa9.19□□□□□ -0.94
CSTF1-202ENST00000415828 NBPF20Q3BBV1 942 aa9.19□□□□□ -0.94
CSTF1-202ENST00000415828 TSEN34Q9BSV6 310 aaKnown RBP9.19□□□□□ -0.94
CSTF1-202ENST00000415828 NDUFB9Q9Y6M9 179 aa9.19□□□□□ -0.94
CSTF1-202ENST00000415828 SETBP1Q9Y6X0 1596 aa9.19□□□□□ -0.94
CSTF1-202ENST00000415828 TOM1O60784 492 aa9.18□□□□□ -0.94
CSTF1-202ENST00000415828 IQGAP2Q13576 1575 aa9.18□□□□□ -0.94
CSTF1-202ENST00000415828 ZFYVE16Q7Z3T8 1539 aa9.18□□□□□ -0.94
CSTF1-202ENST00000415828 PRM3Q9NNZ6 103 aa9.18□□□□□ -0.94
CSTF1-202ENST00000415828 TMPRSS4Q9NRS4 437 aa9.18□□□□□ -0.94
CSTF1-202ENST00000415828 SOS2Q07890 1332 aaPredicted RBP9.17□□□□□ -0.94
CSTF1-202ENST00000415828 H3BM21 787 aa9.17□□□□□ -0.94
CSTF1-202ENST00000415828 WIPF1O43516 503 aa9.17□□□□□ -0.94
CSTF1-202ENST00000415828 FLIIQ13045 1269 aa9.17□□□□□ -0.94
CSTF1-202ENST00000415828 Q6ZVU0 165 aa9.17□□□□□ -0.94
CSTF1-202ENST00000415828 NPAS3Q8IXF0 933 aa9.17□□□□□ -0.94
CSTF1-202ENST00000415828 NEO1Q92859 1461 aa9.16□□□□□ -0.94
CSTF1-202ENST00000415828 AKNAQ7Z591 1439 aa9.16□□□□□ -0.94
CSTF1-202ENST00000415828 ZBBXA8MT70 800 aa9.16□□□□□ -0.94
CSTF1-202ENST00000415828 DNMT3LQ9UJW3 386 aa9.16□□□□□ -0.94
CSTF1-202ENST00000415828 TBC1D2BQ9UPU7 963 aa9.16□□□□□ -0.94
CSTF1-202ENST00000415828 PHLDB1Q86UU1 1377 aa9.15□□□□□ -0.94
CSTF1-202ENST00000415828 IRF7Q92985 503 aa9.15□□□□□ -0.94
CSTF1-202ENST00000415828 AGBL1Q96MI9 1066 aa9.15□□□□□ -0.94
CSTF1-202ENST00000415828 GDPD2Q9HCC8 539 aa9.15□□□□□ -0.94
CSTF1-202ENST00000415828 ZMYM4Q5VZL5 1548 aa9.15□□□□□ -0.95
CSTF1-202ENST00000415828 FBXO45P0C2W1 286 aa9.14□□□□□ -0.95
CSTF1-202ENST00000415828 ZNF784Q8NCA9 323 aaPredicted RBP9.14□□□□□ -0.95
CSTF1-202ENST00000415828 PCDHB9Q9Y5E1 797 aa9.14□□□□□ -0.95
CSTF1-202ENST00000415828 STRCP1A6NGW2 1772 aa9.14□□□□□ -0.95
CSTF1-202ENST00000415828 HECW1Q76N89 1606 aa9.13□□□□□ -0.95
CSTF1-202ENST00000415828 ERBB4Q15303 1308 aa9.13□□□□□ -0.95
CSTF1-202ENST00000415828 FIGNL2A6NMB9 653 aa9.13□□□□□ -0.95
CSTF1-202ENST00000415828 TTLL8A6PVC2 850 aa9.13□□□□□ -0.95
CSTF1-202ENST00000415828 ERVH48-1M5A8F1 160 aa9.13□□□□□ -0.95
CSTF1-202ENST00000415828 UBTFP17480 764 aaKnown RBP9.13□□□□□ -0.95
CSTF1-202ENST00000415828 GMPRP36959 345 aa9.13□□□□□ -0.95
CSTF1-202ENST00000415828 ABL2P42684 1182 aa9.13□□□□□ -0.95
CSTF1-202ENST00000415828 EFCAB5A4FU69 1503 aa9.13□□□□□ -0.95
CSTF1-202ENST00000415828 ESPNB1AK53 854 aa9.12□□□□□ -0.95
CSTF1-202ENST00000415828 SPINT1O43278 529 aa9.12□□□□□ -0.95
CSTF1-202ENST00000415828 RELBQ01201 579 aa9.12□□□□□ -0.95
CSTF1-202ENST00000415828 ZNF142P52746 1687 aaPredicted RBP9.11□□□□□ -0.95
CSTF1-202ENST00000415828 INSM1Q01101 510 aaPredicted RBP9.11□□□□□ -0.95
CSTF1-202ENST00000415828 POM121Q96HA1 1249 aa9.11□□□□□ -0.95
CSTF1-202ENST00000415828 ABCA8O94911 1581 aa9.11□□□□□ -0.95
CSTF1-202ENST00000415828 POLR1AO95602 1720 aaPredicted RBP9.11□□□□□ -0.95
CSTF1-202ENST00000415828 EP400Q96L91 3159 aa9.1□□□□□ -0.95
CSTF1-202ENST00000415828 DENND4BO75064 1496 aaPredicted RBP9.1□□□□□ -0.95
CSTF1-202ENST00000415828 RAD21O60216 631 aa9.1□□□□□ -0.95
CSTF1-202ENST00000415828 LILRA1O75019 489 aa9.1□□□□□ -0.95
CSTF1-202ENST00000415828 GIGYF1O75420 1035 aaPredicted RBP9.1□□□□□ -0.95
CSTF1-202ENST00000415828 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.1□□□□□ -0.956e-7■■■■□ 26.5
CSTF1-202ENST00000415828 ZNF395Q9H8N7 513 aaPredicted RBP9.1□□□□□ -0.95
CSTF1-202ENST00000415828 GTF3C3Q9Y5Q9 886 aa9.1□□□□□ -0.95
CSTF1-202ENST00000415828 FHOD3Q2V2M9 1422 aa9.09□□□□□ -0.95
CSTF1-202ENST00000415828 GPR37L1O60883 481 aa9.09□□□□□ -0.95
CSTF1-202ENST00000415828 PPFIA3O75145 1194 aa9.09□□□□□ -0.95
CSTF1-202ENST00000415828 ADD1P35611 737 aaKnown RBP9.09□□□□□ -0.95
CSTF1-202ENST00000415828 CTSOP43234 321 aaPredicted RBP9.09□□□□□ -0.95
CSTF1-202ENST00000415828 TRIM52Q96A61 297 aa9.09□□□□□ -0.95
CSTF1-202ENST00000415828 INSM2Q96T92 566 aaPredicted RBP9.09□□□□□ -0.95
CSTF1-202ENST00000415828 CYLDQ9NQC7 956 aa9.09□□□□□ -0.95
CSTF1-202ENST00000415828 COG6Q9Y2V7 657 aa9.09□□□□□ -0.95
CSTF1-202ENST00000415828 CPS1P31327 1500 aa9.09□□□□□ -0.95
CSTF1-202ENST00000415828 CEP350Q5VT06 3117 aa9.09□□□□□ -0.95
CSTF1-202ENST00000415828 XIRP1Q702N8 1843 aaKnown RBP9.08□□□□□ -0.96
CSTF1-202ENST00000415828 PTPRKQ15262 1439 aa9.08□□□□□ -0.96
CSTF1-202ENST00000415828 NR1H3Q13133 447 aa9.08□□□□□ -0.96
CSTF1-202ENST00000415828 SEPT12Q8IYM1 358 aa9.08□□□□□ -0.96
CSTF1-202ENST00000415828 LRRC7Q96NW7 1537 aa9.07□□□□□ -0.96
CSTF1-202ENST00000415828 ADH1AP07327 375 aa9.07□□□□□ -0.96
CSTF1-202ENST00000415828 POLMQ9NP87 494 aaPredicted RBP9.07□□□□□ -0.96
CSTF1-202ENST00000415828 TCOF1Q13428 1488 aaKnown RBP9.07□□□□□ -0.96
CSTF1-202ENST00000415828 TRAPPC8Q9Y2L5 1435 aa9.06□□□□□ -0.96
CSTF1-202ENST00000415828 MYO3AQ8NEV4 1616 aa9.06□□□□□ -0.96
CSTF1-202ENST00000415828 ARID3CA6NKF2 412 aa9.06□□□□□ -0.96
CSTF1-202ENST00000415828 PTSQ03393 145 aa9.06□□□□□ -0.96
CSTF1-202ENST00000415828 IRF5Q13568 498 aa9.06□□□□□ -0.96
CSTF1-202ENST00000415828 KDF1Q8NAX2 398 aaPredicted RBP9.06□□□□□ -0.96
CSTF1-202ENST00000415828 SHANK2Q9UPX8 1470 aa9.05□□□□□ -0.96
CSTF1-202ENST00000415828 VAC14Q08AM6 782 aa9.05□□□□□ -0.96
CSTF1-202ENST00000415828 WWC1Q8IX03 1113 aa9.05□□□□□ -0.96
CSTF1-202ENST00000415828 ZNF330Q9Y3S2 320 aaPredicted RBP9.05□□□□□ -0.96
CSTF1-202ENST00000415828 RNF17Q9BXT8 1623 aaKnown RBP9.05□□□□□ -0.96
CSTF1-202ENST00000415828 UGGT2Q9NYU1 1516 aa9.05□□□□□ -0.96
CSTF1-202ENST00000415828 VWDEQ8N2E2 1590 aa9.04□□□□□ -0.96
CSTF1-202ENST00000415828 VSIG8P0DPA2 414 aa9.04□□□□□ -0.96
CSTF1-202ENST00000415828 PTGIRP43119 386 aa9.04□□□□□ -0.96
CSTF1-202ENST00000415828 CLUAP1Q96AJ1 413 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms