RNA–Protein interactions for RNA: ENST00000376919.3

SSX1-201, Transcript of SSX family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX1, Length 1,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1-201ENST00000376919 SAMD7Q7Z3H4 446 aa8.02□□□□□ -1.13
SSX1-201ENST00000376919 SLF2Q8IX21 1173 aa8.02□□□□□ -1.13
SSX1-201ENST00000376919 SLC26A8Q96RN1 970 aa8.02□□□□□ -1.13
SSX1-201ENST00000376919 PCDHB15Q9Y5E8 787 aa8.02□□□□□ -1.13
SSX1-201ENST00000376919 RPGRIP1LQ68CZ1 1315 aa8.02□□□□□ -1.13
SSX1-201ENST00000376919 SETBP1Q9Y6X0 1596 aa8.01□□□□□ -1.13
SSX1-201ENST00000376919 SRPK2P78362 688 aaKnown RBP8.01□□□□□ -1.13
SSX1-201ENST00000376919 QPCTQ16769 361 aa8.01□□□□□ -1.13
SSX1-201ENST00000376919 CCER1Q8TC90 406 aaPredicted RBP8.01□□□□□ -1.13
SSX1-201ENST00000376919 ADAMTS19Q8TE59 1207 aa8.01□□□□□ -1.13
SSX1-201ENST00000376919 IVNS1ABPQ9Y6Y0 642 aa8.01□□□□□ -1.13
SSX1-201ENST00000376919 CPS1P31327 1500 aa8.01□□□□□ -1.13
SSX1-201ENST00000376919 SPATA31E1Q6ZUB1 1445 aa8.01□□□□□ -1.13
SSX1-201ENST00000376919 ZNF335Q9H4Z2 1342 aaPredicted RBP8.01□□□□□ -1.13
SSX1-201ENST00000376919 NRXN3Q9Y4C0 1643 aa8□□□□□ -1.13
SSX1-201ENST00000376919 TONSLQ96HA7 1378 aa8□□□□□ -1.13
SSX1-201ENST00000376919 PRPF38BQ5VTL8 546 aaKnown RBP8□□□□□ -1.13
SSX1-201ENST00000376919 SND1Q7KZF4 910 aaKnown RBP eCLIP8□□□□□ -1.135e-9■■□□□ 13.4
SSX1-201ENST00000376919 PPP1R12CQ9BZL4 782 aa8□□□□□ -1.13
SSX1-201ENST00000376919 MYOM2P54296 1465 aa8□□□□□ -1.13
SSX1-201ENST00000376919 NUTM2BA6NNL0 878 aaPredicted RBP7.99□□□□□ -1.13
SSX1-201ENST00000376919 NUTM2EB1AL46 878 aaPredicted RBP7.99□□□□□ -1.13
SSX1-201ENST00000376919 FDX1P10109 184 aa7.99□□□□□ -1.13
SSX1-201ENST00000376919 LSM11P83369 360 aaKnown RBP eCLIP7.99□□□□□ -1.13
SSX1-201ENST00000376919 LCE2DQ5TA82 110 aaPredicted RBP7.99□□□□□ -1.13
SSX1-201ENST00000376919 NUTM2AQ8IVF1 878 aaPredicted RBP7.99□□□□□ -1.13
SSX1-201ENST00000376919 DCAF11Q8TEB1 546 aa7.99□□□□□ -1.13
SSX1-201ENST00000376919 GJD4Q96KN9 370 aaPredicted RBP7.99□□□□□ -1.13
SSX1-201ENST00000376919 ZFRQ96KR1 1074 aaKnown RBP7.99□□□□□ -1.13
SSX1-201ENST00000376919 STRCP1A6NGW2 1772 aa7.99□□□□□ -1.13
SSX1-201ENST00000376919 CHD2O14647 1828 aaKnown RBP7.99□□□□□ -1.13
SSX1-201ENST00000376919 NWD1Q149M9 1564 aa7.98□□□□□ -1.13
SSX1-201ENST00000376919 CFHP08603 1231 aa7.98□□□□□ -1.13
SSX1-201ENST00000376919 RTL5Q5HYW3 569 aaPredicted RBP7.98□□□□□ -1.13
SSX1-201ENST00000376919 ADGRD1Q6QNK2 874 aa7.98□□□□□ -1.13
SSX1-201ENST00000376919 MRPL50Q8N5N7 158 aaKnown RBP7.98□□□□□ -1.13
SSX1-201ENST00000376919 ALKQ9UM73 1620 aa7.98□□□□□ -1.13
SSX1-201ENST00000376919 NKTRP30414 1462 aaKnown RBP7.98□□□□□ -1.13
SSX1-201ENST00000376919 SETD1AO15047 1707 aaKnown RBP7.98□□□□□ -1.13
SSX1-201ENST00000376919 GRIPAP1Q4V328 841 aa7.97□□□□□ -1.13
SSX1-201ENST00000376919 CABLES1Q8TDN4 633 aa7.97□□□□□ -1.13
SSX1-201ENST00000376919 SIN3AQ96ST3 1273 aa7.97□□□□□ -1.13
SSX1-201ENST00000376919 ZBTB3Q9H5J0 574 aa7.97□□□□□ -1.13
SSX1-201ENST00000376919 VRTNQ9H8Y1 702 aa7.97□□□□□ -1.13
SSX1-201ENST00000376919 PCDHGC3Q9UN70 934 aa7.97□□□□□ -1.13
SSX1-201ENST00000376919 LTBP4Q8N2S1 1624 aa7.96□□□□□ -1.13
SSX1-201ENST00000376919 PIK3C2GO75747 1445 aa7.96□□□□□ -1.13
SSX1-201ENST00000376919 ADAMTS13Q76LX8 1427 aa7.96□□□□□ -1.13
SSX1-201ENST00000376919 XRN1Q8IZH2 1706 aaKnown RBP7.96□□□□□ -1.14
SSX1-201ENST00000376919 PALM3A6NDB9 673 aaPredicted RBP7.96□□□□□ -1.14
SSX1-201ENST00000376919 HRO43593 1189 aa7.96□□□□□ -1.14
SSX1-201ENST00000376919 GUCA2AQ02747 115 aa7.96□□□□□ -1.14
SSX1-201ENST00000376919 FUT2Q10981 343 aa7.96□□□□□ -1.14
SSX1-201ENST00000376919 HLA-CQ95604 372 aa7.96□□□□□ -1.14
SSX1-201ENST00000376919 ADGRF5Q8IZF2 1346 aa7.96□□□□□ -1.14
SSX1-201ENST00000376919 PIK3R4Q99570 1358 aa7.96□□□□□ -1.14
SSX1-201ENST00000376919 KNDC1Q76NI1 1749 aa7.95□□□□□ -1.14
SSX1-201ENST00000376919 RNF40O75150 1001 aa7.95□□□□□ -1.14
SSX1-201ENST00000376919 LRCH3Q96II8 777 aa7.95□□□□□ -1.14
SSX1-201ENST00000376919 TBX22Q9Y458 520 aa7.95□□□□□ -1.14
SSX1-201ENST00000376919 CARNS1A5YM72 827 aa7.94□□□□□ -1.14
SSX1-201ENST00000376919 ATG7O95352 703 aa7.94□□□□□ -1.14
SSX1-201ENST00000376919 KCNA6P17658 529 aa7.94□□□□□ -1.14
SSX1-201ENST00000376919 LMOD1P29536 600 aaPredicted RBP7.94□□□□□ -1.14
SSX1-201ENST00000376919 ATP6V1AP38606 617 aa7.94□□□□□ -1.14
SSX1-201ENST00000376919 KMT5BQ4FZB7 885 aa7.94□□□□□ -1.14
SSX1-201ENST00000376919 B4GALNT3Q6L9W6 998 aa7.94□□□□□ -1.14
SSX1-201ENST00000376919 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.94□□□□□ -1.14
SSX1-201ENST00000376919 STK26Q9P289 416 aa7.94□□□□□ -1.14
SSX1-201ENST00000376919 KIAA1210Q9ULL0 1709 aa7.94□□□□□ -1.14
SSX1-201ENST00000376919 XIRP1Q702N8 1843 aaKnown RBP7.94□□□□□ -1.14
SSX1-201ENST00000376919 IQSEC2Q5JU85 1478 aa7.94□□□□□ -1.14
SSX1-201ENST00000376919 LRRC7Q96NW7 1537 aa7.93□□□□□ -1.14
SSX1-201ENST00000376919 TMEM88BA6NKF7 163 aa7.93□□□□□ -1.14
SSX1-201ENST00000376919 GPR37L1O60883 481 aa7.93□□□□□ -1.14
SSX1-201ENST00000376919 SOX11P35716 441 aa7.93□□□□□ -1.14
SSX1-201ENST00000376919 VAC14Q08AM6 782 aa7.93□□□□□ -1.14
SSX1-201ENST00000376919 MTMR2Q13614 643 aa7.93□□□□□ -1.14
SSX1-201ENST00000376919 STAC3Q96MF2 364 aa7.93□□□□□ -1.14
SSX1-201ENST00000376919 ALG2Q9H553 416 aa7.93□□□□□ -1.14
SSX1-201ENST00000376919 CLSPNQ9HAW4 1339 aa7.93□□□□□ -1.14
SSX1-201ENST00000376919 METP08581 1390 aa7.93□□□□□ -1.14
SSX1-201ENST00000376919 MSH6P52701 1360 aa7.93□□□□□ -1.14
SSX1-201ENST00000376919 NRXN1Q9ULB1 1477 aa7.93□□□□□ -1.14
SSX1-201ENST00000376919 TRPM1Q7Z4N2 1603 aa7.92□□□□□ -1.14
SSX1-201ENST00000376919 NALCNQ8IZF0 1738 aa7.92□□□□□ -1.14
SSX1-201ENST00000376919 L3MBTL2Q969R5 705 aa7.92□□□□□ -1.14
SSX1-201ENST00000376919 GNEQ9Y223 722 aaKnown RBP7.92□□□□□ -1.14
SSX1-201ENST00000376919 TMEM94Q12767 1356 aa7.92□□□□□ -1.14
SSX1-201ENST00000376919 ASXL1Q8IXJ9 1541 aa7.92□□□□□ -1.14
SSX1-201ENST00000376919 UBAP1LF5GYI3 381 aa7.91□□□□□ -1.14
SSX1-201ENST00000376919 ACTN4O43707 911 aaKnown RBP7.91□□□□□ -1.14
SSX1-201ENST00000376919 TMEM132EQ6IEE7 984 aa7.91□□□□□ -1.14
SSX1-201ENST00000376919 ANKRD13DQ6ZTN6 518 aa7.91□□□□□ -1.14
SSX1-201ENST00000376919 UCN2Q96RP3 112 aa7.91□□□□□ -1.14
SSX1-201ENST00000376919 TRIM34Q9BYJ4 488 aa7.91□□□□□ -1.14
SSX1-201ENST00000376919 PTCH1Q13635 1447 aa7.91□□□□□ -1.14
SSX1-201ENST00000376919 PRAG1Q86YV5 1406 aa7.91□□□□□ -1.14
SSX1-201ENST00000376919 PTPRUQ92729 1446 aa7.91□□□□□ -1.14
SSX1-201ENST00000376919 YTHDC2Q9H6S0 1430 aaKnown RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms