RNA–Protein interactions for RNA: ENSMUST00000075084.4

Trim58-201, Transcript of E3 ubiquitin-protein ligase TRIM58, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim58, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58-201ENSMUST00000075084 FanclQ9CR14 375 aa22.89■■□□□ 1.26
Trim58-201ENSMUST00000075084 Dlg5E9Q9R9 1921 aa22.89■■□□□ 1.25
Trim58-201ENSMUST00000075084 Smim5Q8BT42 78 aa22.89■■□□□ 1.25
Trim58-201ENSMUST00000075084 Gcc1Q9D4H2 778 aa22.88■■□□□ 1.25
Trim58-201ENSMUST00000075084 Txnrd1Q9JMH6 613 aa22.88■■□□□ 1.25
Trim58-201ENSMUST00000075084 Pnpla7A2AJ88 1352 aa22.88■■□□□ 1.25
Trim58-201ENSMUST00000075084 Aox2Q5SGK3 1345 aa22.87■■□□□ 1.25
Trim58-201ENSMUST00000075084 Ccdc146E9Q9F7 977 aa22.87■■□□□ 1.25
Trim58-201ENSMUST00000075084 Kif2cQ922S8 721 aa22.86■■□□□ 1.25
Trim58-201ENSMUST00000075084 Disp3A3KFU9 1347 aa22.86■■□□□ 1.25
Trim58-201ENSMUST00000075084 Ybx3Q9JKB3 361 aaKnown RBP22.86■■□□□ 1.25
Trim58-201ENSMUST00000075084 Marf1Q8BJ34 1730 aaKnown RBP22.85■■□□□ 1.25
Trim58-201ENSMUST00000075084 Eif4a1P60843 406 aaKnown RBP22.85■■□□□ 1.25
Trim58-201ENSMUST00000075084 Irx6Q9ER75 438 aa22.85■■□□□ 1.25
Trim58-201ENSMUST00000075084 Col15a1O35206 1367 aa22.85■■□□□ 1.25
Trim58-201ENSMUST00000075084 Cdhr2E9Q7P9 1308 aa22.85■■□□□ 1.25
Trim58-201ENSMUST00000075084 ZgpatQ8VDM1 511 aa22.84■■□□□ 1.25
Trim58-201ENSMUST00000075084 Zfp142G5E869 1843 aa22.84■■□□□ 1.25
Trim58-201ENSMUST00000075084 Nkx2-3P97334 362 aa22.84■■□□□ 1.25
Trim58-201ENSMUST00000075084 Znf526Q8BI66 675 aa22.84■■□□□ 1.25
Trim58-201ENSMUST00000075084 Simc1E9Q6E9 1354 aa22.84■■□□□ 1.25
Trim58-201ENSMUST00000075084 Gnai2P08752 355 aaKnown RBP22.83■■□□□ 1.25
Trim58-201ENSMUST00000075084 HdgfP51859 237 aaKnown RBP22.83■■□□□ 1.25
Trim58-201ENSMUST00000075084 Mcm2P97310 904 aa22.83■■□□□ 1.25
Trim58-201ENSMUST00000075084 Qtrt2B8ZXI1 415 aa22.83■■□□□ 1.24
Trim58-201ENSMUST00000075084 Tbc1d9Q3UYK3 1264 aa22.83■■□□□ 1.24
Trim58-201ENSMUST00000075084 OptnQ8K3K8 584 aa22.83■■□□□ 1.24
Trim58-201ENSMUST00000075084 Smarca5Q91ZW3 1051 aaKnown RBP22.83■■□□□ 1.24
Trim58-201ENSMUST00000075084 Cnksr1A2A9K7 700 aa22.82■■□□□ 1.24
Trim58-201ENSMUST00000075084 Gm10471E9Q1C7 252 aa22.82■■□□□ 1.24
Trim58-201ENSMUST00000075084 Cc2d1aQ8K1A6 943 aa22.82■■□□□ 1.24
Trim58-201ENSMUST00000075084 Nek4Q9Z1J2 792 aa22.82■■□□□ 1.24
Trim58-201ENSMUST00000075084 CrklP47941 303 aa22.82■■□□□ 1.24
Trim58-201ENSMUST00000075084 Arhgef1Q61210 920 aaKnown RBP22.82■■□□□ 1.24
Trim58-201ENSMUST00000075084 Btbd11Q6GQW0 1109 aa22.82■■□□□ 1.24
Trim58-201ENSMUST00000075084 Cyp2d11P24457 504 aa22.81■■□□□ 1.24
Trim58-201ENSMUST00000075084 CoilQ5SU73 570 aa22.8■■□□□ 1.24
Trim58-201ENSMUST00000075084 TkfcQ8VC30 578 aa22.8■■□□□ 1.24
Trim58-201ENSMUST00000075084 Col1a2Q01149 1372 aa22.8■■□□□ 1.24
Trim58-201ENSMUST00000075084 Bcl2l12Q9D3J3 255 aa22.79■■□□□ 1.24
Trim58-201ENSMUST00000075084 Atg4a-psA0A0G2JFS9 396 aa22.79■■□□□ 1.24
Trim58-201ENSMUST00000075084 Atg4aQ8C9S8 396 aa22.79■■□□□ 1.24
Trim58-201ENSMUST00000075084 Stk36Q69ZM6 1316 aa22.78■■□□□ 1.24
Trim58-201ENSMUST00000075084 CenppQ9CZ92 286 aa22.77■■□□□ 1.24
Trim58-201ENSMUST00000075084 ScaperF8VQ70 1398 aaKnown RBP22.76■■□□□ 1.23
Trim58-201ENSMUST00000075084 BcorQ8CGN4 1759 aa22.76■■□□□ 1.23
Trim58-201ENSMUST00000075084 Hsp90aa1P07901 733 aaKnown RBP22.76■■□□□ 1.23
Trim58-201ENSMUST00000075084 RgmbQ7TQ33 436 aa22.76■■□□□ 1.23
Trim58-201ENSMUST00000075084 Srgap3Q812A2 1099 aa22.76■■□□□ 1.23
Trim58-201ENSMUST00000075084 Ppp1r42Q8R1Z4 357 aa22.76■■□□□ 1.23
Trim58-201ENSMUST00000075084 Fkbp4P30416 458 aa22.75■■□□□ 1.23
Trim58-201ENSMUST00000075084 Ddx54Q8K4L0 874 aaKnown RBP22.75■■□□□ 1.23
Trim58-201ENSMUST00000075084 Nphp1Q9QY53 687 aa22.74■■□□□ 1.23
Trim58-201ENSMUST00000075084 Atp8b2P98199 1209 aa22.74■■□□□ 1.23
Trim58-201ENSMUST00000075084 Cyp46a1Q9WVK8 500 aa22.74■■□□□ 1.23
Trim58-201ENSMUST00000075084 Gm10093D3YYI8 482 aa22.73■■□□□ 1.23
Trim58-201ENSMUST00000075084 Hdac1O09106 482 aaKnown RBP22.73■■□□□ 1.23
Trim58-201ENSMUST00000075084 ThemisQ8BGW0 636 aa22.73■■□□□ 1.23
Trim58-201ENSMUST00000075084 Slx1bQ8BX32 270 aa22.73■■□□□ 1.23
Trim58-201ENSMUST00000075084 Pdzd9Q9D9M4 266 aa22.73■■□□□ 1.23
Trim58-201ENSMUST00000075084 Slit1Q80TR4 1531 aa22.73■■□□□ 1.23
Trim58-201ENSMUST00000075084 Anapc15-psA0A140T8L6 141 aa22.72■■□□□ 1.23
Trim58-201ENSMUST00000075084 FocadA2AKG8 1798 aa22.72■■□□□ 1.23
Trim58-201ENSMUST00000075084 Echdc1Q9D9V3 322 aa22.72■■□□□ 1.23
Trim58-201ENSMUST00000075084 Mmp8O70138 465 aa22.72■■□□□ 1.23
Trim58-201ENSMUST00000075084 Zranb3Q6NZP1 1069 aa22.71■■□□□ 1.23
Trim58-201ENSMUST00000075084 Ccdc155Q80VJ8 648 aa22.71■■□□□ 1.23
Trim58-201ENSMUST00000075084 GorabQ8BRM2 368 aa22.7■■□□□ 1.23
Trim58-201ENSMUST00000075084 Lrrc59Q922Q8 307 aaKnown RBP22.7■■□□□ 1.23
Trim58-201ENSMUST00000075084 Cwc27Q3TKY6 469 aa22.7■■□□□ 1.22
Trim58-201ENSMUST00000075084 Slc5a4bQ91ZP4 660 aa22.7■■□□□ 1.22
Trim58-201ENSMUST00000075084 Tfip11Q9ERA6 838 aaKnown RBP22.7■■□□□ 1.22
Trim58-201ENSMUST00000075084 Pard3Q99NH2 1333 aa22.69■■□□□ 1.22
Trim58-201ENSMUST00000075084 GckrQ91X44 587 aa22.69■■□□□ 1.22
Trim58-201ENSMUST00000075084 Tnks1bp1P58871 1720 aa22.69■■□□□ 1.22
Trim58-201ENSMUST00000075084 PsapQ61207 557 aaKnown RBP22.69■■□□□ 1.22
Trim58-201ENSMUST00000075084 Bcl2l13P59017 434 aa22.68■■□□□ 1.22
Trim58-201ENSMUST00000075084 Tmem119Q8R138 280 aa22.68■■□□□ 1.22
Trim58-201ENSMUST00000075084 Atg3Q9CPX6 314 aa22.68■■□□□ 1.22
Trim58-201ENSMUST00000075084 Pdia3P27773 505 aaKnown RBP22.67■■□□□ 1.22
Trim58-201ENSMUST00000075084 Bend3Q6PAL0 825 aa22.67■■□□□ 1.22
Trim58-201ENSMUST00000075084 Ppp6r3Q922D4 844 aa22.67■■□□□ 1.22
Trim58-201ENSMUST00000075084 Phkg2Q9DB30 406 aa22.67■■□□□ 1.22
Trim58-201ENSMUST00000075084 Adcy9P51830 1353 aa22.67■■□□□ 1.22
Trim58-201ENSMUST00000075084 Tns2Q8CGB6 1400 aa22.67■■□□□ 1.22
Trim58-201ENSMUST00000075084 Exoc6bA6H5Z3 810 aa22.67■■□□□ 1.22
Trim58-201ENSMUST00000075084 Terf2O35144 541 aa22.67■■□□□ 1.22
Trim58-201ENSMUST00000075084 DaxxO35613 739 aa22.67■■□□□ 1.22
Trim58-201ENSMUST00000075084 Bcar3Q9QZK2 820 aa22.67■■□□□ 1.22
Trim58-201ENSMUST00000075084 Catsper2A2ARP9 588 aa22.66■■□□□ 1.22
Trim58-201ENSMUST00000075084 Plekhd1B2RPU2 505 aa22.66■■□□□ 1.22
Trim58-201ENSMUST00000075084 Zap70P43404 618 aa22.66■■□□□ 1.22
Trim58-201ENSMUST00000075084 Nucb1Q02819 459 aaKnown RBP22.66■■□□□ 1.22
Trim58-201ENSMUST00000075084 Chmp7Q8R1T1 451 aa22.66■■□□□ 1.22
Trim58-201ENSMUST00000075084 Htatsf1Q8BGC0 757 aa22.65■■□□□ 1.22
Trim58-201ENSMUST00000075084 Mcmdc2E9Q956 681 aa22.64■■□□□ 1.21
Trim58-201ENSMUST00000075084 Taf7Q9R1C0 341 aa22.64■■□□□ 1.21
Trim58-201ENSMUST00000075084 Zpr1Q62384 459 aa22.63■■□□□ 1.21
Trim58-201ENSMUST00000075084 Ppip5k2Q6ZQB6 1129 aa22.63■■□□□ 1.21
Trim58-201ENSMUST00000075084 Flt4P35917 1363 aa22.63■■□□□ 1.21
Retrieved 100 of 22,080 RNA–protein pairs in 63.4 ms