RNA–Protein interactions for RNA: ENSMUST00000032168.6

Sec61a1-201, Transcript of Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sec61a1, Length 3,172 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1-201ENSMUST00000032168 Pip4k2bQ80XI4 416 aa20.91■□□□□ 0.94
Sec61a1-201ENSMUST00000032168 Nup153E9Q3G8 1462 aaKnown RBP20.9■□□□□ 0.94
Sec61a1-201ENSMUST00000032168 Myo5bP21271 1818 aa20.9■□□□□ 0.94
Sec61a1-201ENSMUST00000032168 Cyp46a1Q9WVK8 500 aa20.89■□□□□ 0.94
Sec61a1-201ENSMUST00000032168 Exoc6bA6H5Z3 810 aa20.89■□□□□ 0.93
Sec61a1-201ENSMUST00000032168 CenppQ9CZ92 286 aa20.89■□□□□ 0.93
Sec61a1-201ENSMUST00000032168 Gm10093D3YYI8 482 aa20.88■□□□□ 0.93
Sec61a1-201ENSMUST00000032168 Hdac1O09106 482 aaKnown RBP20.88■□□□□ 0.93
Sec61a1-201ENSMUST00000032168 Nrxn3Q6P9K9 1571 aa20.88■□□□□ 0.93
Sec61a1-201ENSMUST00000032168 Pdia3P27773 505 aaKnown RBP20.87■□□□□ 0.93
Sec61a1-201ENSMUST00000032168 Map3k13Q1HKZ5 959 aa20.87■□□□□ 0.93
Sec61a1-201ENSMUST00000032168 Nphp1Q9QY53 687 aa20.87■□□□□ 0.93
Sec61a1-201ENSMUST00000032168 TnrQ8BYI9 1358 aa20.87■□□□□ 0.93
Sec61a1-201ENSMUST00000032168 Spryd3E9Q9B3 442 aa20.87■□□□□ 0.93
Sec61a1-201ENSMUST00000032168 Aox2Q5SGK3 1345 aa20.87■□□□□ 0.93
Sec61a1-201ENSMUST00000032168 Gm21698A0A087WQP8 267 aa20.87■□□□□ 0.93
Sec61a1-201ENSMUST00000032168 Gm21671G3UY31 267 aa20.87■□□□□ 0.93
Sec61a1-201ENSMUST00000032168 Zap70P43404 618 aa20.87■□□□□ 0.93
Sec61a1-201ENSMUST00000032168 Q9D2X8 372 aa20.87■□□□□ 0.93
Sec61a1-201ENSMUST00000032168 Dmrtc1Q9D9R7 182 aa20.87■□□□□ 0.93
Sec61a1-201ENSMUST00000032168 Ppp6r3Q922D4 844 aa20.86■□□□□ 0.93
Sec61a1-201ENSMUST00000032168 Dlg5E9Q9R9 1921 aa20.86■□□□□ 0.93
Sec61a1-201ENSMUST00000032168 Alpk3Q924C5 1678 aa20.86■□□□□ 0.93
Sec61a1-201ENSMUST00000032168 CoilQ5SU73 570 aa20.85■□□□□ 0.93
Sec61a1-201ENSMUST00000032168 Prune1Q8BIW1 454 aa20.85■□□□□ 0.93
Sec61a1-201ENSMUST00000032168 Col15a1O35206 1367 aa20.85■□□□□ 0.93
Sec61a1-201ENSMUST00000032168 Tlr7P58681 1050 aa20.85■□□□□ 0.93
Sec61a1-201ENSMUST00000032168 Atf3Q60765 181 aa20.85■□□□□ 0.93
Sec61a1-201ENSMUST00000032168 Kcna6Q61923 529 aa20.85■□□□□ 0.93
Sec61a1-201ENSMUST00000032168 OptnQ8K3K8 584 aa20.84■□□□□ 0.93
Sec61a1-201ENSMUST00000032168 Mcm2P97310 904 aa20.84■□□□□ 0.93
Sec61a1-201ENSMUST00000032168 Htatsf1Q8BGC0 757 aa20.84■□□□□ 0.93
Sec61a1-201ENSMUST00000032168 Mmp8O70138 465 aa20.83■□□□□ 0.93
Sec61a1-201ENSMUST00000032168 Atp8b2P98199 1209 aa20.83■□□□□ 0.93
Sec61a1-201ENSMUST00000032168 Nol11Q8BJW5 723 aaKnown RBP20.83■□□□□ 0.93
Sec61a1-201ENSMUST00000032168 Amigo3Q8C2S7 508 aa20.83■□□□□ 0.93
Sec61a1-201ENSMUST00000032168 Unc13bQ9Z1N9 1602 aa20.83■□□□□ 0.93
Sec61a1-201ENSMUST00000032168 Ppip5k2Q6ZQB6 1129 aa20.83■□□□□ 0.93
Sec61a1-201ENSMUST00000032168 Cnksr1A2A9K7 700 aa20.82■□□□□ 0.92
Sec61a1-201ENSMUST00000032168 Nucb1Q02819 459 aaKnown RBP20.82■□□□□ 0.92
Sec61a1-201ENSMUST00000032168 Fam50bQ9WTJ8 334 aa20.82■□□□□ 0.92
Sec61a1-201ENSMUST00000032168 Hmox1P14901 289 aa20.82■□□□□ 0.92
Sec61a1-201ENSMUST00000032168 Zranb3Q6NZP1 1069 aa20.82■□□□□ 0.92
Sec61a1-201ENSMUST00000032168 Col1a2Q01149 1372 aa20.81■□□□□ 0.92
Sec61a1-201ENSMUST00000032168 Nid2O88322 1403 aa20.81■□□□□ 0.92
Sec61a1-201ENSMUST00000032168 Mphosph10Q810V0 681 aaKnown RBP20.81■□□□□ 0.92
Sec61a1-201ENSMUST00000032168 Cfdp1O88271 295 aaKnown RBP20.81■□□□□ 0.92
Sec61a1-201ENSMUST00000032168 Antxr1Q9CZ52 562 aa20.8■□□□□ 0.92
Sec61a1-201ENSMUST00000032168 Pdzd9Q9D9M4 266 aa20.8■□□□□ 0.92
Sec61a1-201ENSMUST00000032168 Siglec1Q62230 1695 aa20.8■□□□□ 0.92
Sec61a1-201ENSMUST00000032168 Slc4a10Q5DTL9 1118 aa20.8■□□□□ 0.92
Sec61a1-201ENSMUST00000032168 Anapc15-psA0A140T8L6 141 aa20.79■□□□□ 0.92
Sec61a1-201ENSMUST00000032168 CrklP47941 303 aa20.79■□□□□ 0.92
Sec61a1-201ENSMUST00000032168 Scaf1Q5U4C3 1256 aaKnown RBP20.79■□□□□ 0.92
Sec61a1-201ENSMUST00000032168 GckrQ91X44 587 aa20.79■□□□□ 0.92
Sec61a1-201ENSMUST00000032168 Phlpp1Q8CHE4 1687 aa20.79■□□□□ 0.92
Sec61a1-201ENSMUST00000032168 Ptpdc1Q6NZK8 747 aa20.79■□□□□ 0.92
Sec61a1-201ENSMUST00000032168 Stk36Q69ZM6 1316 aa20.78■□□□□ 0.92
Sec61a1-201ENSMUST00000032168 Bend3Q6PAL0 825 aa20.78■□□□□ 0.92
Sec61a1-201ENSMUST00000032168 ThemisQ8BGW0 636 aa20.78■□□□□ 0.92
Sec61a1-201ENSMUST00000032168 Rapgef3Q8VCC8 918 aa20.78■□□□□ 0.92
Sec61a1-201ENSMUST00000032168 Abcc12Q80WJ6 1366 aa20.77■□□□□ 0.92
Sec61a1-201ENSMUST00000032168 Dnajc5P60904 198 aa20.77■□□□□ 0.92
Sec61a1-201ENSMUST00000032168 RestQ8VIG1 1082 aa20.77■□□□□ 0.92
Sec61a1-201ENSMUST00000032168 Adcy9P51830 1353 aa20.77■□□□□ 0.92
Sec61a1-201ENSMUST00000032168 EngaseQ8BX80 734 aa20.77■□□□□ 0.92
Sec61a1-201ENSMUST00000032168 TkfcQ8VC30 578 aa20.77■□□□□ 0.92
Sec61a1-201ENSMUST00000032168 Igfbp6P47880 238 aa20.77■□□□□ 0.91
Sec61a1-201ENSMUST00000032168 Map3k2Q61083 619 aa20.77■□□□□ 0.91
Sec61a1-201ENSMUST00000032168 Echdc1Q9D9V3 322 aa20.77■□□□□ 0.91
Sec61a1-201ENSMUST00000032168 Ier5O89113 308 aa20.76■□□□□ 0.91
Sec61a1-201ENSMUST00000032168 Pdlim2Q8R1G6 349 aa20.76■□□□□ 0.91
Sec61a1-201ENSMUST00000032168 Mcmdc2E9Q956 681 aa20.75■□□□□ 0.91
Sec61a1-201ENSMUST00000032168 Hspa2P17156 633 aa20.75■□□□□ 0.91
Sec61a1-201ENSMUST00000032168 Tpx2A2APB8 745 aaKnown RBP20.74■□□□□ 0.91
Sec61a1-201ENSMUST00000032168 Chmp4cQ9D7F7 232 aa20.74■□□□□ 0.91
Sec61a1-201ENSMUST00000032168 Gli3Q61602 1583 aa20.74■□□□□ 0.91
Sec61a1-201ENSMUST00000032168 Simc1E9Q6E9 1354 aa20.73■□□□□ 0.91
Sec61a1-201ENSMUST00000032168 Tgfb1i1Q62219 461 aa20.73■□□□□ 0.91
Sec61a1-201ENSMUST00000032168 SympkQ80X82 1284 aa20.73■□□□□ 0.91
Sec61a1-201ENSMUST00000032168 Zkscan2G3X952 960 aa20.73■□□□□ 0.91
Sec61a1-201ENSMUST00000032168 Chmp7Q8R1T1 451 aa20.73■□□□□ 0.91
Sec61a1-201ENSMUST00000032168 Col18a1P39061 1774 aa20.72■□□□□ 0.91
Sec61a1-201ENSMUST00000032168 Pa2g4P50580 394 aaKnown RBP20.71■□□□□ 0.91
Sec61a1-201ENSMUST00000032168 Phkg2Q9DB30 406 aa20.71■□□□□ 0.91
Sec61a1-201ENSMUST00000032168 Atp10bB1AWN4 1474 aa20.71■□□□□ 0.91
Sec61a1-201ENSMUST00000032168 Ssh1Q76I79 1042 aa20.71■□□□□ 0.91
Sec61a1-201ENSMUST00000032168 PigbQ9JJQ0 542 aa20.71■□□□□ 0.91
Sec61a1-201ENSMUST00000032168 Scn4aQ9ER60 1841 aa20.71■□□□□ 0.91
Sec61a1-201ENSMUST00000032168 Hsp90b1P08113 802 aaKnown RBP20.71■□□□□ 0.91
Sec61a1-201ENSMUST00000032168 PsapQ61207 557 aaKnown RBP20.71■□□□□ 0.91
Sec61a1-201ENSMUST00000032168 Erc2Q6PH08 957 aa20.71■□□□□ 0.91
Sec61a1-201ENSMUST00000032168 Pdia6Q922R8 440 aaKnown RBP20.71■□□□□ 0.91
Sec61a1-201ENSMUST00000032168 Plcb2A3KGF7 1181 aa20.7■□□□□ 0.9
Sec61a1-201ENSMUST00000032168 Card10P58660 1021 aa20.7■□□□□ 0.9
Sec61a1-201ENSMUST00000032168 RgmbQ7TQ33 436 aa20.7■□□□□ 0.9
Sec61a1-201ENSMUST00000032168 Txnrd1Q9JMH6 613 aa20.7■□□□□ 0.9
Sec61a1-201ENSMUST00000032168 Tshz3Q8CGV9 1081 aa20.7■□□□□ 0.9
Sec61a1-201ENSMUST00000032168 Ddit3P35639 168 aa20.69■□□□□ 0.9
Sec61a1-201ENSMUST00000032168 Slc39a6Q8C145 765 aa20.69■□□□□ 0.9
Retrieved 100 of 22,080 RNA–protein pairs in 14.6 ms