RNA–Protein interactions for RNA: ENSMUST00000022328.13

Ldb3-202, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 2,468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-202ENSMUST00000022328 Catsper2A2ARP9 588 aa13.57□□□□□ -0.24
Ldb3-202ENSMUST00000022328 Gsdma3Q5Y4Y6 464 aa13.57□□□□□ -0.24
Ldb3-202ENSMUST00000022328 Tmem132eQ6IEE6 982 aa13.57□□□□□ -0.24
Ldb3-202ENSMUST00000022328 Skap1Q3UUV5 355 aa13.56□□□□□ -0.24
Ldb3-202ENSMUST00000022328 Arfgef2A2A5R2 1792 aa13.56□□□□□ -0.24
Ldb3-202ENSMUST00000022328 Anapc15-psA0A140T8L6 141 aa13.56□□□□□ -0.24
Ldb3-202ENSMUST00000022328 Ccdc146E9Q9F7 977 aa13.56□□□□□ -0.24
Ldb3-202ENSMUST00000022328 Il4rP16382 810 aa13.56□□□□□ -0.24
Ldb3-202ENSMUST00000022328 Col14a1Q80X19 1797 aa13.56□□□□□ -0.24
Ldb3-202ENSMUST00000022328 Q3TQI7 289 aaKnown RBP13.55□□□□□ -0.24
Ldb3-202ENSMUST00000022328 Sipa1l2Q80TE4 1722 aa13.55□□□□□ -0.24
Ldb3-202ENSMUST00000022328 Robo1O89026 1612 aa13.55□□□□□ -0.24
Ldb3-202ENSMUST00000022328 Fam83gQ5SWY7 812 aa13.55□□□□□ -0.24
Ldb3-202ENSMUST00000022328 Topaz1E5FYH1 1653 aa13.55□□□□□ -0.24
Ldb3-202ENSMUST00000022328 Nfat5Q9WV30 1534 aa13.55□□□□□ -0.24
Ldb3-202ENSMUST00000022328 Thsd7aQ69ZU6 1645 aa13.54□□□□□ -0.24
Ldb3-202ENSMUST00000022328 Gimap6Q8K349 305 aa13.54□□□□□ -0.24
Ldb3-202ENSMUST00000022328 Fbln2P37889 1221 aa13.53□□□□□ -0.24
Ldb3-202ENSMUST00000022328 PogkQ80TC5 607 aa13.53□□□□□ -0.24
Ldb3-202ENSMUST00000022328 Amotl1Q9D4H4 968 aa13.53□□□□□ -0.24
Ldb3-202ENSMUST00000022328 Kdm6aO70546 1401 aa13.53□□□□□ -0.24
Ldb3-202ENSMUST00000022328 Nup153E9Q3G8 1462 aaKnown RBP13.53□□□□□ -0.24
Ldb3-202ENSMUST00000022328 Tex2Q6ZPJ0 1128 aaKnown RBP13.53□□□□□ -0.24
Ldb3-202ENSMUST00000022328 Tfip11Q9ERA6 838 aaKnown RBP13.53□□□□□ -0.24
Ldb3-202ENSMUST00000022328 ScaperF8VQ70 1398 aaKnown RBP13.52□□□□□ -0.24
Ldb3-202ENSMUST00000022328 Atg4a-psA0A0G2JFS9 396 aa13.52□□□□□ -0.24
Ldb3-202ENSMUST00000022328 Atg4aQ8C9S8 396 aa13.52□□□□□ -0.24
Ldb3-202ENSMUST00000022328 TimelessQ9R1X4 1197 aa13.52□□□□□ -0.24
Ldb3-202ENSMUST00000022328 Pnpla7A2AJ88 1352 aa13.52□□□□□ -0.25
Ldb3-202ENSMUST00000022328 Fyb1O35601 819 aa13.52□□□□□ -0.25
Ldb3-202ENSMUST00000022328 Gnai2P08752 355 aaKnown RBP13.52□□□□□ -0.25
Ldb3-202ENSMUST00000022328 Cyp2d12Q8BVD2 504 aa13.52□□□□□ -0.25
Ldb3-202ENSMUST00000022328 TatQ8QZR1 454 aa13.52□□□□□ -0.25
Ldb3-202ENSMUST00000022328 Kdm4cQ8VCD7 1054 aa13.52□□□□□ -0.25
Ldb3-202ENSMUST00000022328 Smarca5Q91ZW3 1051 aaKnown RBP13.52□□□□□ -0.25
Ldb3-202ENSMUST00000022328 Unc13bQ9Z1N9 1602 aa13.52□□□□□ -0.25
Ldb3-202ENSMUST00000022328 Ssh1Q76I79 1042 aa13.51□□□□□ -0.25
Ldb3-202ENSMUST00000022328 Kcnh5Q920E3 988 aa13.51□□□□□ -0.25
Ldb3-202ENSMUST00000022328 Chpf2Q3UU43 768 aa13.51□□□□□ -0.25
Ldb3-202ENSMUST00000022328 Nid2O88322 1403 aa13.51□□□□□ -0.25
Ldb3-202ENSMUST00000022328 Disp3A3KFU9 1347 aa13.5□□□□□ -0.25
Ldb3-202ENSMUST00000022328 Wdr17E9Q271 1322 aa13.5□□□□□ -0.25
Ldb3-202ENSMUST00000022328 GorabQ8BRM2 368 aa13.5□□□□□ -0.25
Ldb3-202ENSMUST00000022328 Ppp6r3Q922D4 844 aa13.5□□□□□ -0.25
Ldb3-202ENSMUST00000022328 Cyp46a1Q9WVK8 500 aa13.5□□□□□ -0.25
Ldb3-202ENSMUST00000022328 Myo5bP21271 1818 aa13.5□□□□□ -0.25
Ldb3-202ENSMUST00000022328 Pdia3P27773 505 aaKnown RBP13.5□□□□□ -0.25
Ldb3-202ENSMUST00000022328 Nucb1Q02819 459 aaKnown RBP13.5□□□□□ -0.25
Ldb3-202ENSMUST00000022328 Amotl2Q8K371 772 aa13.5□□□□□ -0.25
Ldb3-202ENSMUST00000022328 Stk36Q69ZM6 1316 aa13.49□□□□□ -0.25
Ldb3-202ENSMUST00000022328 Clcn1Q64347 994 aa13.49□□□□□ -0.25
Ldb3-202ENSMUST00000022328 Ppip5k2Q6ZQB6 1129 aa13.49□□□□□ -0.25
Ldb3-202ENSMUST00000022328 Abcc12Q80WJ6 1366 aa13.49□□□□□ -0.25
Ldb3-202ENSMUST00000022328 Isy1Q69ZQ2 285 aaKnown RBP13.49□□□□□ -0.25
Ldb3-202ENSMUST00000022328 1700010I14RikQ7TPG0 532 aa13.49□□□□□ -0.25
Ldb3-202ENSMUST00000022328 Cnksr1A2A9K7 700 aa13.48□□□□□ -0.25
Ldb3-202ENSMUST00000022328 Nsfl1cQ9CZ44 370 aaKnown RBP13.48□□□□□ -0.25
Ldb3-202ENSMUST00000022328 Alpk3Q924C5 1678 aa13.48□□□□□ -0.25
Ldb3-202ENSMUST00000022328 Atp8b2P98199 1209 aa13.48□□□□□ -0.25
Ldb3-202ENSMUST00000022328 Nphp1Q9QY53 687 aa13.48□□□□□ -0.25
Ldb3-202ENSMUST00000022328 Fmnl2A2APV2 1086 aa13.47□□□□□ -0.25
Ldb3-202ENSMUST00000022328 Tpm2P58774 284 aa13.47□□□□□ -0.25
Ldb3-202ENSMUST00000022328 Srgap3Q812A2 1099 aa13.47□□□□□ -0.25
Ldb3-202ENSMUST00000022328 EngaseQ8BX80 734 aa13.47□□□□□ -0.25
Ldb3-202ENSMUST00000022328 Ppp1r42Q8R1Z4 357 aa13.47□□□□□ -0.25
Ldb3-202ENSMUST00000022328 Dnajc10Q9DC23 793 aa13.47□□□□□ -0.25
Ldb3-202ENSMUST00000022328 Mmp8O70138 465 aa13.47□□□□□ -0.25
Ldb3-202ENSMUST00000022328 Rfx1P48377 963 aa13.47□□□□□ -0.25
Ldb3-202ENSMUST00000022328 Eif4a1P60843 406 aaKnown RBP13.46□□□□□ -0.25
Ldb3-202ENSMUST00000022328 Rsph3aQ3UFY4 516 aa13.46□□□□□ -0.25
Ldb3-202ENSMUST00000022328 CoilQ5SU73 570 aa13.46□□□□□ -0.25
Ldb3-202ENSMUST00000022328 Cc2d1aQ8K1A6 943 aa13.46□□□□□ -0.25
Ldb3-202ENSMUST00000022328 Elp1Q7TT37 1333 aaKnown RBP13.46□□□□□ -0.25
Ldb3-202ENSMUST00000022328 Cyp2d11P24457 504 aa13.46□□□□□ -0.26
Ldb3-202ENSMUST00000022328 Ddrgk1Q80WW9 315 aa13.46□□□□□ -0.26
Ldb3-202ENSMUST00000022328 Tnnt1O88346 262 aa13.45□□□□□ -0.26
Ldb3-202ENSMUST00000022328 Hoxa7P02830 229 aa13.45□□□□□ -0.26
Ldb3-202ENSMUST00000022328 Nom1Q3UFM5 854 aaKnown RBP13.45□□□□□ -0.26
Ldb3-202ENSMUST00000022328 Trim44Q9QXA7 346 aa13.45□□□□□ -0.26
Ldb3-202ENSMUST00000022328 Gli3Q61602 1583 aa13.45□□□□□ -0.26
Ldb3-202ENSMUST00000022328 Rnf123Q5XPI3 1314 aa13.44□□□□□ -0.26
Ldb3-202ENSMUST00000022328 Siglec1Q62230 1695 aa13.44□□□□□ -0.26
Ldb3-202ENSMUST00000022328 Nrxn3Q6P9K9 1571 aa13.44□□□□□ -0.26
Ldb3-202ENSMUST00000022328 Bcar3Q9QZK2 820 aa13.44□□□□□ -0.26
Ldb3-202ENSMUST00000022328 Aox2Q5SGK3 1345 aa13.44□□□□□ -0.26
Ldb3-202ENSMUST00000022328 Pcdh10E9PXQ7 1057 aa13.44□□□□□ -0.26
Ldb3-202ENSMUST00000022328 Zkscan2G3X952 960 aa13.44□□□□□ -0.26
Ldb3-202ENSMUST00000022328 Ddit3P35639 168 aa13.44□□□□□ -0.26
Ldb3-202ENSMUST00000022328 Dlg5E9Q9R9 1921 aa13.43□□□□□ -0.26
Ldb3-202ENSMUST00000022328 Atg3Q9CPX6 314 aa13.43□□□□□ -0.26
Ldb3-202ENSMUST00000022328 Q9D2X8 372 aa13.43□□□□□ -0.26
Ldb3-202ENSMUST00000022328 TnrQ8BYI9 1358 aa13.43□□□□□ -0.26
Ldb3-202ENSMUST00000022328 Mcmdc2E9Q956 681 aa13.42□□□□□ -0.26
Ldb3-202ENSMUST00000022328 Col1a2Q01149 1372 aa13.42□□□□□ -0.26
Ldb3-202ENSMUST00000022328 Cwc27Q3TKY6 469 aa13.42□□□□□ -0.26
Ldb3-202ENSMUST00000022328 Erc2Q6PH08 957 aa13.42□□□□□ -0.26
Ldb3-202ENSMUST00000022328 Slain2Q8CI08 581 aa13.42□□□□□ -0.26
Ldb3-202ENSMUST00000022328 Zbtb22Q9Z0G7 638 aa13.42□□□□□ -0.26
Ldb3-202ENSMUST00000022328 Echdc1Q9D9V3 322 aa13.41□□□□□ -0.26
Ldb3-202ENSMUST00000022328 Plcb2A3KGF7 1181 aa13.41□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 32.3 ms