Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.38■□□□□ 0.21
SFTPBP07988 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SFTPBP07988 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SFTPBP07988 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.38■□□□□ 0.21
SFTPBP07988 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.38■□□□□ 0.21
SFTPBP07988 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SFTPBP07988 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SFTPBP07988 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SFTPBP07988 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.38■□□□□ 0.21
SFTPBP07988 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SFTPBP07988 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SFTPBP07988 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.38■□□□□ 0.21
SFTPBP07988 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SFTPBP07988 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SFTPBP07988 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SFTPBP07988 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SFTPBP07988 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SFTPBP07988 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.38■□□□□ 0.21
SFTPBP07988 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SFTPBP07988 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.38■□□□□ 0.21
SFTPBP07988 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.38■□□□□ 0.21
SFTPBP07988 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SFTPBP07988 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.38■□□□□ 0.21
SFTPBP07988 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SFTPBP07988 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.38■□□□□ 0.21
SFTPBP07988 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.38■□□□□ 0.21
SFTPBP07988 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.38■□□□□ 0.21
SFTPBP07988 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SFTPBP07988 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SFTPBP07988 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SFTPBP07988 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SFTPBP07988 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.38■□□□□ 0.21
SFTPBP07988 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.38■□□□□ 0.21
SFTPBP07988 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.38■□□□□ 0.21
SFTPBP07988 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.38■□□□□ 0.21
SFTPBP07988 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SFTPBP07988 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SFTPBP07988 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.38■□□□□ 0.21
SFTPBP07988 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SFTPBP07988 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.38■□□□□ 0.21
SFTPBP07988 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SFTPBP07988 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SFTPBP07988 AC006333.2-201ENST00000607957 2099 ntBASIC16.38■□□□□ 0.21
SFTPBP07988 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SFTPBP07988 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SFTPBP07988 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SFTPBP07988 CROCCP3-202ENST00000420820 1947 ntBASIC16.37■□□□□ 0.21
SFTPBP07988 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.37■□□□□ 0.21
SFTPBP07988 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SFTPBP07988 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SFTPBP07988 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SFTPBP07988 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SFTPBP07988 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.37■□□□□ 0.21
SFTPBP07988 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.37■□□□□ 0.21
SFTPBP07988 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SFTPBP07988 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.37■□□□□ 0.21
SFTPBP07988 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SFTPBP07988 AC239809.2-201ENST00000415381 517 ntBASIC16.37■□□□□ 0.21
SFTPBP07988 TUBB8P6-201ENST00000436895 1288 ntBASIC16.37■□□□□ 0.21
SFTPBP07988 UBE2SP1-201ENST00000450587 669 ntBASIC16.37■□□□□ 0.21
SFTPBP07988 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.37■□□□□ 0.21
SFTPBP07988 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
SFTPBP07988 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.37■□□□□ 0.21
SFTPBP07988 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.37■□□□□ 0.21
SFTPBP07988 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.37■□□□□ 0.21
SFTPBP07988 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.37■□□□□ 0.21
SFTPBP07988 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.37■□□□□ 0.21
SFTPBP07988 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SFTPBP07988 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SFTPBP07988 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SFTPBP07988 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SFTPBP07988 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
SFTPBP07988 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SFTPBP07988 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SFTPBP07988 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.37■□□□□ 0.21
SFTPBP07988 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SFTPBP07988 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
SFTPBP07988 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SFTPBP07988 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SFTPBP07988 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.37■□□□□ 0.21
SFTPBP07988 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
SFTPBP07988 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.37■□□□□ 0.21
SFTPBP07988 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SFTPBP07988 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SFTPBP07988 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SFTPBP07988 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.36■□□□□ 0.21
SFTPBP07988 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SFTPBP07988 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
SFTPBP07988 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SFTPBP07988 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
SFTPBP07988 AC005332.8-201ENST00000622750 2735 ntBASIC16.36■□□□□ 0.21
SFTPBP07988 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SFTPBP07988 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SFTPBP07988 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SFTPBP07988 AL138781.2-201ENST00000617896 1843 ntBASIC16.36■□□□□ 0.21
SFTPBP07988 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SFTPBP07988 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SFTPBP07988 KRASP1-201ENST00000407852 552 ntBASIC16.36■□□□□ 0.21
SFTPBP07988 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.36■□□□□ 0.21
SFTPBP07988 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms