RNA–Protein interactions for RNA: ENST00000251968.3

TSG101-201, Transcript of tumor susceptibility 101, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSG101, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSG101-201ENST00000251968 NISCHQ9Y2I1 1504 aa44.39■■■■■ 4.7
TSG101-201ENST00000251968 CCDC180Q9P1Z9 1646 aa38.91■■■■□ 3.82
TSG101-201ENST00000251968 ZCCHC6Q5VYS8 1495 aaKnown RBP37.22■■■■□ 3.55
TSG101-201ENST00000251968 ABCC9O60706 1549 aa37.1■■■■□ 3.53
TSG101-201ENST00000251968 DCAF8L2P0C7V8 631 aa36.8■■■■□ 3.48
TSG101-201ENST00000251968 DCAF1Q9Y4B6 1507 aa36.68■■■■□ 3.46
TSG101-201ENST00000251968 MYO15BQ96JP2 1530 aa36.36■■■■□ 3.41
TSG101-201ENST00000251968 NACADO15069 1562 aa36.29■■■■□ 3.4
TSG101-201ENST00000251968 RB1CC1Q8TDY2 1594 aa36.07■■■■□ 3.36
TSG101-201ENST00000251968 SHROOM4Q9ULL8 1493 aa36■■■■□ 3.35
TSG101-201ENST00000251968 SCRIBQ14160 1630 aa35.75■■■■□ 3.31
TSG101-201ENST00000251968 UNC13AQ9UPW8 1703 aa35.45■■■■□ 3.27
TSG101-201ENST00000251968 BICRAQ9NZM4 1560 aa35.01■■■■□ 3.2
TSG101-201ENST00000251968 PABPN1Q86U42 306 aaKnown RBP eCLIP34.9■■■■□ 3.18
TSG101-201ENST00000251968 CECR2Q9BXF3 1484 aa34.54■■■■□ 3.12
TSG101-201ENST00000251968 SUPT5HO00267 1087 aaKnown RBP34.45■■■■□ 3.11
TSG101-201ENST00000251968 BAZ1AQ9NRL2 1556 aaPredicted RBP34.31■■■■□ 3.08
TSG101-201ENST00000251968 MROH2BQ7Z745 1585 aa34.3■■■■□ 3.08
TSG101-201ENST00000251968 RSF1Q96T23 1441 aaPredicted RBP34.29■■■■□ 3.08
TSG101-201ENST00000251968 SMARCA4P51532 1647 aa34.23■■■■□ 3.07
TSG101-201ENST00000251968 WIZO95785 1651 aa34.05■■■■□ 3.04
TSG101-201ENST00000251968 EIF4G1Q04637 1599 aaKnown RBP33.98■■■■□ 3.03
TSG101-201ENST00000251968 PEG3Q9GZU2 1588 aa33.8■■■■□ 3
TSG101-201ENST00000251968 ATAD2BQ9ULI0 1458 aa33.72■■■□□ 2.99
TSG101-201ENST00000251968 SMARCA2P51531 1590 aa33.69■■■□□ 2.98
TSG101-201ENST00000251968 TOP2AP11388 1531 aaKnown RBP33.63■■■□□ 2.97
TSG101-201ENST00000251968 CC2D2AQ9P2K1 1620 aa33.59■■■□□ 2.97
TSG101-201ENST00000251968 BAZ1BQ9UIG0 1483 aaKnown RBP33.52■■■□□ 2.96
TSG101-201ENST00000251968 NCAPD3P42695 1498 aa33.47■■■□□ 2.95
TSG101-201ENST00000251968 HMGXB3Q12766 1538 aa33.42■■■□□ 2.94
TSG101-201ENST00000251968 CCDC88BA6NC98 1476 aa33.28■■■□□ 2.92
TSG101-201ENST00000251968 DNAJC5BQ9UF47 199 aa33.24■■■□□ 2.91
TSG101-201ENST00000251968 CHIC1Q5VXU3 224 aa32.77■■■□□ 2.84
TSG101-201ENST00000251968 CFTRP13569 1480 aa32.64■■■□□ 2.82
TSG101-201ENST00000251968 CADPSQ9ULU8 1353 aa32.59■■■□□ 2.81
TSG101-201ENST00000251968 PRDM2Q13029 1718 aa32.57■■■□□ 2.8
TSG101-201ENST00000251968 ABCC8Q09428 1581 aa32.51■■■□□ 2.8
TSG101-201ENST00000251968 NESP48681 1621 aa32.47■■■□□ 2.79
TSG101-201ENST00000251968 LAMC3Q9Y6N6 1575 aa32.42■■■□□ 2.78
TSG101-201ENST00000251968 TRIM41Q8WV44 630 aa32.4■■■□□ 2.78
TSG101-201ENST00000251968 WRNQ14191 1432 aaPredicted RBP eCLIP32.29■■■□□ 2.767e-7■■■■■ 52.5
TSG101-201ENST00000251968 FANCD2Q9BXW9 1451 aa32.25■■■□□ 2.75
TSG101-201ENST00000251968 SYNJ1O43426 1573 aa32.21■■■□□ 2.75
TSG101-201ENST00000251968 PDS5BQ9NTI5 1447 aa32.15■■■□□ 2.74
TSG101-201ENST00000251968 KIF21AQ7Z4S6 1674 aa32.14■■■□□ 2.74
TSG101-201ENST00000251968 TOP2BQ02880 1626 aa32.1■■■□□ 2.73
TSG101-201ENST00000251968 CUX1P39880 1505 aa32.09■■■□□ 2.73
TSG101-201ENST00000251968 BIVM-ERCC5R4GMW8 1640 aa32.09■■■□□ 2.73
TSG101-201ENST00000251968 CEP164Q9UPV0 1460 aa32.09■■■□□ 2.73
TSG101-201ENST00000251968 DNMBPQ6XZF7 1577 aa31.91■■■□□ 2.7
TSG101-201ENST00000251968 URB2Q14146 1524 aaKnown RBP31.87■■■□□ 2.69
TSG101-201ENST00000251968 TOPBP1Q92547 1522 aa31.87■■■□□ 2.69
TSG101-201ENST00000251968 ERCC6Q03468 1493 aa31.83■■■□□ 2.69
TSG101-201ENST00000251968 FAM9AQ8IZU1 332 aaPredicted RBP31.82■■■□□ 2.68
TSG101-201ENST00000251968 FGD5Q6ZNL6 1462 aa31.8■■■□□ 2.68
TSG101-201ENST00000251968 SOGA1O94964 1423 aa31.79■■■□□ 2.68
TSG101-201ENST00000251968 MRC2Q9UBG0 1479 aa31.77■■■□□ 2.68
TSG101-201ENST00000251968 RUSC2Q8N2Y8 1516 aa31.72■■■□□ 2.67
TSG101-201ENST00000251968 POLA1P09884 1462 aaPredicted RBP31.69■■■□□ 2.66
TSG101-201ENST00000251968 THOC2Q8NI27 1593 aaKnown RBP31.65■■■□□ 2.66
TSG101-201ENST00000251968 WDR62O43379 1518 aa31.63■■■□□ 2.65
TSG101-201ENST00000251968 EEA1Q15075 1411 aa31.6■■■□□ 2.65
TSG101-201ENST00000251968 RAD54L2Q9Y4B4 1467 aa31.6■■■□□ 2.65
TSG101-201ENST00000251968 LOC105371045A0A1W2PR82 267 aa31.53■■■□□ 2.64
TSG101-201ENST00000251968 CUX2O14529 1486 aa31.51■■■□□ 2.64
TSG101-201ENST00000251968 CSRNP3Q8WYN3 585 aa31.49■■■□□ 2.63
TSG101-201ENST00000251968 KIF27Q86VH2 1401 aa31.49■■■□□ 2.63
TSG101-201ENST00000251968 WDR97A6NE52 1622 aa31.49■■■□□ 2.63
TSG101-201ENST00000251968 ABCA10Q8WWZ4 1543 aa31.48■■■□□ 2.63
TSG101-201ENST00000251968 TARBP1Q13395 1621 aaKnown RBP31.45■■■□□ 2.62
TSG101-201ENST00000251968 EHMT2Q96KQ7 1210 aa31.42■■■□□ 2.62
TSG101-201ENST00000251968 IFT140Q96RY7 1462 aa31.32■■■□□ 2.6
TSG101-201ENST00000251968 TDRD9Q8NDG6 1382 aaKnown RBP31.3■■■□□ 2.6
TSG101-201ENST00000251968 ABCA5Q8WWZ7 1642 aa31.29■■■□□ 2.6
TSG101-201ENST00000251968 KIF21BO75037 1637 aa31.27■■■□□ 2.6
TSG101-201ENST00000251968 IGF1RP08069 1367 aa31.26■■■□□ 2.59
TSG101-201ENST00000251968 GAPVD1Q14C86 1478 aa31.22■■■□□ 2.59
TSG101-201ENST00000251968 PRXQ9BXM0 1461 aa31.2■■■□□ 2.58
TSG101-201ENST00000251968 ZNF608Q9ULD9 1512 aaPredicted RBP31.2■■■□□ 2.58
TSG101-201ENST00000251968 GOLGA3Q08378 1498 aa31.19■■■□□ 2.58
TSG101-201ENST00000251968 AQRO60306 1485 aaKnown RBP eCLIP31.17■■■□□ 2.58
TSG101-201ENST00000251968 RAPGEF2Q9Y4G8 1499 aa31.16■■■□□ 2.58
TSG101-201ENST00000251968 PBRM1Q86U86 1689 aa31.15■■■□□ 2.58
TSG101-201ENST00000251968 ERICH3Q5RHP9 1530 aa31.12■■■□□ 2.57
TSG101-201ENST00000251968 EIF4G3O43432 1585 aaKnown RBP31.11■■■□□ 2.57
TSG101-201ENST00000251968 CARMIL1Q5VZK9 1371 aa31.1■■■□□ 2.57
TSG101-201ENST00000251968 CUL7Q14999 1698 aa31.09■■■□□ 2.57
TSG101-201ENST00000251968 UBTFP17480 764 aaKnown RBP31.08■■■□□ 2.57
TSG101-201ENST00000251968 GRIN2BQ13224 1484 aa31.02■■■□□ 2.56
TSG101-201ENST00000251968 TNIKQ9UKE5 1360 aa31■■■□□ 2.55
TSG101-201ENST00000251968 ADAMTS12P58397 1594 aa30.9■■■□□ 2.54
TSG101-201ENST00000251968 SNAPC4Q5SXM2 1469 aa30.87■■■□□ 2.53
TSG101-201ENST00000251968 FHAD1B1AJZ9 1412 aa30.85■■■□□ 2.53
TSG101-201ENST00000251968 CEP162Q5TB80 1403 aa30.84■■■□□ 2.53
TSG101-201ENST00000251968 MAGI1Q96QZ7 1491 aaPredicted RBP30.79■■■□□ 2.52
TSG101-201ENST00000251968 CTTNBP2Q8WZ74 1663 aa30.75■■■□□ 2.51
TSG101-201ENST00000251968 RANGAP1P46060 587 aaPredicted RBP30.72■■■□□ 2.51
TSG101-201ENST00000251968 SYNJ2O15056 1496 aa30.69■■■□□ 2.5
TSG101-201ENST00000251968 CLIP1P30622 1438 aa30.68■■■□□ 2.5
TSG101-201ENST00000251968 GRIN2AQ12879 1464 aa30.65■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms