RNA–Protein interactions for RNA: ENST00000239223.3

DUSP1-201, Transcript of dual specificity phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP1, Length 2,019 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP1-201ENST00000239223 NISCHQ9Y2I1 1504 aa44.18■■■■■ 4.66
DUSP1-201ENST00000239223 CCDC180Q9P1Z9 1646 aa38.59■■■■□ 3.77
DUSP1-201ENST00000239223 ZCCHC6Q5VYS8 1495 aaKnown RBP37.07■■■■□ 3.52
DUSP1-201ENST00000239223 ABCC9O60706 1549 aa36.85■■■■□ 3.49
DUSP1-201ENST00000239223 DCAF8L2P0C7V8 631 aa36.63■■■■□ 3.45
DUSP1-201ENST00000239223 DCAF1Q9Y4B6 1507 aa36.43■■■■□ 3.42
DUSP1-201ENST00000239223 MYO15BQ96JP2 1530 aa36.06■■■■□ 3.36
DUSP1-201ENST00000239223 SHROOM4Q9ULL8 1493 aa36.02■■■■□ 3.36
DUSP1-201ENST00000239223 NACADO15069 1562 aa35.97■■■■□ 3.35
DUSP1-201ENST00000239223 RB1CC1Q8TDY2 1594 aa35.75■■■■□ 3.31
DUSP1-201ENST00000239223 SCRIBQ14160 1630 aa35.59■■■■□ 3.29
DUSP1-201ENST00000239223 UNC13AQ9UPW8 1703 aa35.19■■■■□ 3.22
DUSP1-201ENST00000239223 BICRAQ9NZM4 1560 aa34.8■■■■□ 3.16
DUSP1-201ENST00000239223 PABPN1Q86U42 306 aaKnown RBP eCLIP34.72■■■■□ 3.15
DUSP1-201ENST00000239223 SUPT5HO00267 1087 aaKnown RBP34.47■■■■□ 3.11
DUSP1-201ENST00000239223 CECR2Q9BXF3 1484 aa34.45■■■■□ 3.11
DUSP1-201ENST00000239223 RSF1Q96T23 1441 aaPredicted RBP34.21■■■■□ 3.07
DUSP1-201ENST00000239223 MROH2BQ7Z745 1585 aa34.2■■■■□ 3.06
DUSP1-201ENST00000239223 BAZ1AQ9NRL2 1556 aaPredicted RBP34.09■■■■□ 3.05
DUSP1-201ENST00000239223 SMARCA4P51532 1647 aa34.04■■■■□ 3.04
DUSP1-201ENST00000239223 WIZO95785 1651 aa33.93■■■■□ 3.02
DUSP1-201ENST00000239223 EIF4G1Q04637 1599 aaKnown RBP33.73■■■□□ 2.99
DUSP1-201ENST00000239223 PEG3Q9GZU2 1588 aa33.57■■■□□ 2.97
DUSP1-201ENST00000239223 ATAD2BQ9ULI0 1458 aa33.53■■■□□ 2.96
DUSP1-201ENST00000239223 TOP2AP11388 1531 aaKnown RBP33.47■■■□□ 2.95
DUSP1-201ENST00000239223 SMARCA2P51531 1590 aa33.43■■■□□ 2.94
DUSP1-201ENST00000239223 CC2D2AQ9P2K1 1620 aa33.31■■■□□ 2.92
DUSP1-201ENST00000239223 BAZ1BQ9UIG0 1483 aaKnown RBP33.31■■■□□ 2.92
DUSP1-201ENST00000239223 NCAPD3P42695 1498 aa33.22■■■□□ 2.91
DUSP1-201ENST00000239223 CCDC88BA6NC98 1476 aa33.17■■■□□ 2.9
DUSP1-201ENST00000239223 HMGXB3Q12766 1538 aa33.16■■■□□ 2.9
DUSP1-201ENST00000239223 CHIC1Q5VXU3 224 aa32.83■■■□□ 2.85
DUSP1-201ENST00000239223 DNAJC5BQ9UF47 199 aa32.78■■■□□ 2.84
DUSP1-201ENST00000239223 ABCC8Q09428 1581 aa32.47■■■□□ 2.79
DUSP1-201ENST00000239223 CFTRP13569 1480 aa32.44■■■□□ 2.78
DUSP1-201ENST00000239223 CADPSQ9ULU8 1353 aa32.37■■■□□ 2.77
DUSP1-201ENST00000239223 TRIM41Q8WV44 630 aa32.33■■■□□ 2.77
DUSP1-201ENST00000239223 NESP48681 1621 aa32.31■■■□□ 2.76
DUSP1-201ENST00000239223 PRDM2Q13029 1718 aa32.29■■■□□ 2.76
DUSP1-201ENST00000239223 WRNQ14191 1432 aaPredicted RBP eCLIP32.17■■■□□ 2.74
DUSP1-201ENST00000239223 SYNJ1O43426 1573 aa32.14■■■□□ 2.74
DUSP1-201ENST00000239223 LAMC3Q9Y6N6 1575 aa32.14■■■□□ 2.74
DUSP1-201ENST00000239223 FANCD2Q9BXW9 1451 aa32.05■■■□□ 2.72
DUSP1-201ENST00000239223 CUX1P39880 1505 aa31.98■■■□□ 2.71
DUSP1-201ENST00000239223 TOP2BQ02880 1626 aa31.95■■■□□ 2.7
DUSP1-201ENST00000239223 BIVM-ERCC5R4GMW8 1640 aa31.92■■■□□ 2.7
DUSP1-201ENST00000239223 KIF21AQ7Z4S6 1674 aa31.9■■■□□ 2.7
DUSP1-201ENST00000239223 FAM9AQ8IZU1 332 aaPredicted RBP31.87■■■□□ 2.69
DUSP1-201ENST00000239223 PDS5BQ9NTI5 1447 aa31.86■■■□□ 2.69
DUSP1-201ENST00000239223 CEP164Q9UPV0 1460 aa31.85■■■□□ 2.69
DUSP1-201ENST00000239223 SOGA1O94964 1423 aa31.78■■■□□ 2.68
DUSP1-201ENST00000239223 RUSC2Q8N2Y8 1516 aa31.72■■■□□ 2.67
DUSP1-201ENST00000239223 URB2Q14146 1524 aaKnown RBP31.72■■■□□ 2.67
DUSP1-201ENST00000239223 DNMBPQ6XZF7 1577 aa31.7■■■□□ 2.66
DUSP1-201ENST00000239223 TOPBP1Q92547 1522 aa31.69■■■□□ 2.66
DUSP1-201ENST00000239223 LOC105371045A0A1W2PR82 267 aa31.65■■■□□ 2.66
DUSP1-201ENST00000239223 FGD5Q6ZNL6 1462 aa31.64■■■□□ 2.66
DUSP1-201ENST00000239223 POLA1P09884 1462 aaPredicted RBP31.53■■■□□ 2.64
DUSP1-201ENST00000239223 ERCC6Q03468 1493 aa31.53■■■□□ 2.64
DUSP1-201ENST00000239223 MRC2Q9UBG0 1479 aa31.52■■■□□ 2.64
DUSP1-201ENST00000239223 EHMT2Q96KQ7 1210 aa31.51■■■□□ 2.64
DUSP1-201ENST00000239223 RAD54L2Q9Y4B4 1467 aa31.47■■■□□ 2.63
DUSP1-201ENST00000239223 EEA1Q15075 1411 aa31.46■■■□□ 2.63
DUSP1-201ENST00000239223 CSRNP3Q8WYN3 585 aa31.41■■■□□ 2.62
DUSP1-201ENST00000239223 THOC2Q8NI27 1593 aaKnown RBP31.4■■■□□ 2.62
DUSP1-201ENST00000239223 CUX2O14529 1486 aa31.38■■■□□ 2.61
DUSP1-201ENST00000239223 WDR62O43379 1518 aa31.38■■■□□ 2.61
DUSP1-201ENST00000239223 KIF27Q86VH2 1401 aa31.33■■■□□ 2.61
DUSP1-201ENST00000239223 ABCA10Q8WWZ4 1543 aa31.31■■■□□ 2.6
DUSP1-201ENST00000239223 WDR97A6NE52 1622 aa31.3■■■□□ 2.6
DUSP1-201ENST00000239223 TARBP1Q13395 1621 aaKnown RBP31.26■■■□□ 2.59
DUSP1-201ENST00000239223 KIF21BO75037 1637 aa31.17■■■□□ 2.58
DUSP1-201ENST00000239223 TDRD9Q8NDG6 1382 aaKnown RBP31.17■■■□□ 2.58
DUSP1-201ENST00000239223 IGF1RP08069 1367 aa31.14■■■□□ 2.57
DUSP1-201ENST00000239223 RAPGEF2Q9Y4G8 1499 aa31.13■■■□□ 2.57
DUSP1-201ENST00000239223 ABCA5Q8WWZ7 1642 aa31.12■■■□□ 2.57
DUSP1-201ENST00000239223 GOLGA3Q08378 1498 aa31.11■■■□□ 2.57
DUSP1-201ENST00000239223 PRXQ9BXM0 1461 aa31.11■■■□□ 2.57
DUSP1-201ENST00000239223 IFT140Q96RY7 1462 aa31.07■■■□□ 2.56
DUSP1-201ENST00000239223 ZNF608Q9ULD9 1512 aaPredicted RBP31.05■■■□□ 2.56
DUSP1-201ENST00000239223 GAPVD1Q14C86 1478 aa31.04■■■□□ 2.56
DUSP1-201ENST00000239223 AQRO60306 1485 aaKnown RBP eCLIP31.02■■■□□ 2.562e-9■■■■■ 38.2
DUSP1-201ENST00000239223 UBTFP17480 764 aaKnown RBP31.01■■■□□ 2.55
DUSP1-201ENST00000239223 ERICH3Q5RHP9 1530 aa30.98■■■□□ 2.55
DUSP1-201ENST00000239223 CARMIL1Q5VZK9 1371 aa30.96■■■□□ 2.55
DUSP1-201ENST00000239223 TNIKQ9UKE5 1360 aa30.94■■■□□ 2.54
DUSP1-201ENST00000239223 PBRM1Q86U86 1689 aa30.93■■■□□ 2.54
DUSP1-201ENST00000239223 EIF4G3O43432 1585 aaKnown RBP30.9■■■□□ 2.54
DUSP1-201ENST00000239223 CUL7Q14999 1698 aa30.88■■■□□ 2.53
DUSP1-201ENST00000239223 CEP162Q5TB80 1403 aa30.84■■■□□ 2.53
DUSP1-201ENST00000239223 GRIN2BQ13224 1484 aa30.8■■■□□ 2.52
DUSP1-201ENST00000239223 ADAMTS12P58397 1594 aa30.73■■■□□ 2.51
DUSP1-201ENST00000239223 RANGAP1P46060 587 aaPredicted RBP30.71■■■□□ 2.51
DUSP1-201ENST00000239223 SNAPC4Q5SXM2 1469 aa30.7■■■□□ 2.51
DUSP1-201ENST00000239223 FHAD1B1AJZ9 1412 aa30.66■■■□□ 2.5
DUSP1-201ENST00000239223 CLIP1P30622 1438 aa30.63■■■□□ 2.49
DUSP1-201ENST00000239223 CTTNBP2Q8WZ74 1663 aa30.56■■■□□ 2.48
DUSP1-201ENST00000239223 MAGI1Q96QZ7 1491 aaPredicted RBP30.55■■■□□ 2.48
DUSP1-201ENST00000239223 GRIN2AQ12879 1464 aa30.47■■■□□ 2.47
DUSP1-201ENST00000239223 SYNJ2O15056 1496 aa30.46■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms