RNA–Protein interactions for RNA: ENST00000414200.6

CCND3-204, Transcript of cyclin D3, humanhuman

TSL 2 BASIC

Gene CCND3, Length 1,724 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-204ENST00000414200 NISCHQ9Y2I1 1504 aa43.12■■■■■ 4.49
CCND3-204ENST00000414200 CCDC180Q9P1Z9 1646 aa38.39■■■■□ 3.74
CCND3-204ENST00000414200 ABCC9O60706 1549 aa37.97■■■■□ 3.67
CCND3-204ENST00000414200 RB1CC1Q8TDY2 1594 aa36.3■■■■□ 3.4
CCND3-204ENST00000414200 DCAF8L2P0C7V8 631 aa36.3■■■■□ 3.4
CCND3-204ENST00000414200 NACADO15069 1562 aa36.17■■■■□ 3.38
CCND3-204ENST00000414200 ZCCHC6Q5VYS8 1495 aaKnown RBP35.84■■■■□ 3.33
CCND3-204ENST00000414200 MYO15BQ96JP2 1530 aa35.8■■■■□ 3.32
CCND3-204ENST00000414200 DCAF1Q9Y4B6 1507 aa35.58■■■■□ 3.29
CCND3-204ENST00000414200 UNC13AQ9UPW8 1703 aa35.54■■■■□ 3.28
CCND3-204ENST00000414200 PABPN1Q86U42 306 aaKnown RBP eCLIP35.49■■■■□ 3.27
CCND3-204ENST00000414200 BICRAQ9NZM4 1560 aa35.27■■■■□ 3.24
CCND3-204ENST00000414200 DNAJC5BQ9UF47 199 aa35.16■■■■□ 3.22
CCND3-204ENST00000414200 SCRIBQ14160 1630 aa35.13■■■■□ 3.21
CCND3-204ENST00000414200 SHROOM4Q9ULL8 1493 aa34.71■■■■□ 3.15
CCND3-204ENST00000414200 EIF4G1Q04637 1599 aaKnown RBP34.34■■■■□ 3.09
CCND3-204ENST00000414200 CC2D2AQ9P2K1 1620 aa34.29■■■■□ 3.08
CCND3-204ENST00000414200 CECR2Q9BXF3 1484 aa34.11■■■■□ 3.05
CCND3-204ENST00000414200 SMARCA4P51532 1647 aa33.52■■■□□ 2.96
CCND3-204ENST00000414200 ATAD2BQ9ULI0 1458 aa33.42■■■□□ 2.94
CCND3-204ENST00000414200 BAZ1AQ9NRL2 1556 aaPredicted RBP33.41■■■□□ 2.94
CCND3-204ENST00000414200 NCAPD3P42695 1498 aa33.4■■■□□ 2.94
CCND3-204ENST00000414200 SUPT5HO00267 1087 aaKnown RBP33.34■■■□□ 2.93
CCND3-204ENST00000414200 SMARCA2P51531 1590 aa33.31■■■□□ 2.92
CCND3-204ENST00000414200 MROH2BQ7Z745 1585 aa33.27■■■□□ 2.92
CCND3-204ENST00000414200 HMGXB3Q12766 1538 aa33.19■■■□□ 2.9
CCND3-204ENST00000414200 PEG3Q9GZU2 1588 aa33.14■■■□□ 2.9
CCND3-204ENST00000414200 BAZ1BQ9UIG0 1483 aaKnown RBP33.13■■■□□ 2.89
CCND3-204ENST00000414200 WIZO95785 1651 aa32.92■■■□□ 2.86
CCND3-204ENST00000414200 NESP48681 1621 aa32.8■■■□□ 2.84
CCND3-204ENST00000414200 RSF1Q96T23 1441 aaPredicted RBP32.78■■■□□ 2.84
CCND3-204ENST00000414200 ERCC6Q03468 1493 aa32.71■■■□□ 2.83
CCND3-204ENST00000414200 LAMC3Q9Y6N6 1575 aa32.56■■■□□ 2.8
CCND3-204ENST00000414200 TOP2AP11388 1531 aaKnown RBP32.48■■■□□ 2.79
CCND3-204ENST00000414200 CADPSQ9ULU8 1353 aa32.45■■■□□ 2.78
CCND3-204ENST00000414200 CUX2O14529 1486 aa32.39■■■□□ 2.78
CCND3-204ENST00000414200 PDS5BQ9NTI5 1447 aa32.36■■■□□ 2.77
CCND3-204ENST00000414200 KIF21AQ7Z4S6 1674 aa32.36■■■□□ 2.77
CCND3-204ENST00000414200 CHIC1Q5VXU3 224 aa32.34■■■□□ 2.77
CCND3-204ENST00000414200 THOC2Q8NI27 1593 aaKnown RBP32.27■■■□□ 2.76
CCND3-204ENST00000414200 CFTRP13569 1480 aa32.18■■■□□ 2.74
CCND3-204ENST00000414200 CCDC88BA6NC98 1476 aa32.16■■■□□ 2.74
CCND3-204ENST00000414200 FANCD2Q9BXW9 1451 aa32.09■■■□□ 2.73
CCND3-204ENST00000414200 MRC2Q9UBG0 1479 aa32.05■■■□□ 2.72
CCND3-204ENST00000414200 CEP164Q9UPV0 1460 aa32.05■■■□□ 2.72
CCND3-204ENST00000414200 WDR62O43379 1518 aa31.95■■■□□ 2.7
CCND3-204ENST00000414200 PRDM2Q13029 1718 aa31.88■■■□□ 2.69
CCND3-204ENST00000414200 URB2Q14146 1524 aaKnown RBP31.8■■■□□ 2.68
CCND3-204ENST00000414200 DNAJC5Q9H3Z4 198 aa31.8■■■□□ 2.68
CCND3-204ENST00000414200 TOPBP1Q92547 1522 aa31.54■■■□□ 2.64
CCND3-204ENST00000414200 DNMBPQ6XZF7 1577 aa31.45■■■□□ 2.63
CCND3-204ENST00000414200 ABCC8Q09428 1581 aa31.44■■■□□ 2.62
CCND3-204ENST00000414200 IFT140Q96RY7 1462 aa31.38■■■□□ 2.61
CCND3-204ENST00000414200 ZNF608Q9ULD9 1512 aaPredicted RBP31.34■■■□□ 2.61
CCND3-204ENST00000414200 TRIM41Q8WV44 630 aa31.3■■■□□ 2.6
CCND3-204ENST00000414200 POLA1P09884 1462 aaPredicted RBP31.26■■■□□ 2.6
CCND3-204ENST00000414200 CUX1P39880 1505 aa31.22■■■□□ 2.59
CCND3-204ENST00000414200 TARBP1Q13395 1621 aaKnown RBP31.21■■■□□ 2.59
CCND3-204ENST00000414200 RAD54L2Q9Y4B4 1467 aa31.19■■■□□ 2.58
CCND3-204ENST00000414200 EIF4G3O43432 1585 aaKnown RBP31.16■■■□□ 2.58
CCND3-204ENST00000414200 FGD5Q6ZNL6 1462 aa31.15■■■□□ 2.58
CCND3-204ENST00000414200 SOGA1O94964 1423 aa31.14■■■□□ 2.57
CCND3-204ENST00000414200 AQRO60306 1485 aaKnown RBP eCLIP31.13■■■□□ 2.574e-7■■■■■ 38.3
CCND3-204ENST00000414200 LOC105371045A0A1W2PR82 267 aa31.1■■■□□ 2.57
CCND3-204ENST00000414200 OSCARQ8IYS5 282 aa31.07■■■□□ 2.56
CCND3-204ENST00000414200 TDRD9Q8NDG6 1382 aaKnown RBP31.05■■■□□ 2.56
CCND3-204ENST00000414200 WRNQ14191 1432 aaPredicted RBP eCLIP30.9■■■□□ 2.549e-6■■■■■ 50.1
CCND3-204ENST00000414200 WDR97A6NE52 1622 aa30.87■■■□□ 2.53
CCND3-204ENST00000414200 SYNJ1O43426 1573 aa30.87■■■□□ 2.53
CCND3-204ENST00000414200 FBLN2P98095 1184 aa30.86■■■□□ 2.53
CCND3-204ENST00000414200 TOP2BQ02880 1626 aa30.84■■■□□ 2.53
CCND3-204ENST00000414200 CHD1O14646 1710 aa30.83■■■□□ 2.53
CCND3-204ENST00000414200 BIVM-ERCC5R4GMW8 1640 aa30.83■■■□□ 2.53
CCND3-204ENST00000414200 SNAPC4Q5SXM2 1469 aa30.8■■■□□ 2.52
CCND3-204ENST00000414200 ABCA10Q8WWZ4 1543 aa30.79■■■□□ 2.52
CCND3-204ENST00000414200 GRIN2BQ13224 1484 aa30.77■■■□□ 2.52
CCND3-204ENST00000414200 GAPVD1Q14C86 1478 aa30.76■■■□□ 2.51
CCND3-204ENST00000414200 FAM9AQ8IZU1 332 aaPredicted RBP30.74■■■□□ 2.51
CCND3-204ENST00000414200 PBRM1Q86U86 1689 aa30.71■■■□□ 2.51
CCND3-204ENST00000414200 ABCA5Q8WWZ7 1642 aa30.7■■■□□ 2.51
CCND3-204ENST00000414200 MAGI1Q96QZ7 1491 aaPredicted RBP30.69■■■□□ 2.5
CCND3-204ENST00000414200 CHMP7Q8WUX9 453 aaPredicted RBP30.67■■■□□ 2.5
CCND3-204ENST00000414200 RIMBP3CA6NJZ7 1639 aa30.61■■■□□ 2.49
CCND3-204ENST00000414200 RIMBP3BA6NNM3 1639 aa30.61■■■□□ 2.49
CCND3-204ENST00000414200 RIMBP3Q9UFD9 1639 aa30.61■■■□□ 2.49
CCND3-204ENST00000414200 SYNJ2O15056 1496 aa30.6■■■□□ 2.49
CCND3-204ENST00000414200 ARHGEF11O15085 1522 aa30.56■■■□□ 2.48
CCND3-204ENST00000414200 EEA1Q15075 1411 aa30.49■■■□□ 2.47
CCND3-204ENST00000414200 CLASP1Q7Z460 1538 aa30.46■■■□□ 2.47
CCND3-204ENST00000414200 ADAMTS12P58397 1594 aa30.44■■■□□ 2.46
CCND3-204ENST00000414200 ERICH3Q5RHP9 1530 aa30.4■■■□□ 2.46
CCND3-204ENST00000414200 GRIN2AQ12879 1464 aa30.39■■■□□ 2.45
CCND3-204ENST00000414200 CYB5RLQ6IPT4 315 aa30.37■■■□□ 2.45
CCND3-204ENST00000414200 FHAD1B1AJZ9 1412 aa30.37■■■□□ 2.45
CCND3-204ENST00000414200 PCGF6Q9BYE7 350 aa30.33■■■□□ 2.45
CCND3-204ENST00000414200 ARAP1Q96P48 1450 aa30.31■■■□□ 2.44
CCND3-204ENST00000414200 RUSC2Q8N2Y8 1516 aa30.28■■■□□ 2.44
CCND3-204ENST00000414200 CEP170Q5SW79 1584 aa30.27■■■□□ 2.44
CCND3-204ENST00000414200 KIF27Q86VH2 1401 aa30.26■■■□□ 2.44
CCND3-204ENST00000414200 EHMT2Q96KQ7 1210 aa30.25■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms