Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNAP47Q5SQN1 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.36■□□□□ 0.53
SNAP47Q5SQN1 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNAP47Q5SQN1 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNAP47Q5SQN1 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNAP47Q5SQN1 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SNAP47Q5SQN1 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNAP47Q5SQN1 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNAP47Q5SQN1 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNAP47Q5SQN1 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNAP47Q5SQN1 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNAP47Q5SQN1 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNAP47Q5SQN1 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNAP47Q5SQN1 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNAP47Q5SQN1 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNAP47Q5SQN1 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
SNAP47Q5SQN1 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNAP47Q5SQN1 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNAP47Q5SQN1 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
SNAP47Q5SQN1 KRT8P45-201ENST00000414328 1447 ntBASIC18.35■□□□□ 0.53
SNAP47Q5SQN1 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SNAP47Q5SQN1 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNAP47Q5SQN1 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNAP47Q5SQN1 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNAP47Q5SQN1 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNAP47Q5SQN1 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.35■□□□□ 0.53
SNAP47Q5SQN1 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNAP47Q5SQN1 TSPY5P-201ENST00000426936 936 ntBASIC18.35■□□□□ 0.53
SNAP47Q5SQN1 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNAP47Q5SQN1 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.35■□□□□ 0.53
SNAP47Q5SQN1 AL512604.3-201ENST00000569583 964 ntBASIC18.35■□□□□ 0.53
SNAP47Q5SQN1 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.35■□□□□ 0.53
SNAP47Q5SQN1 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SNAP47Q5SQN1 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.35■□□□□ 0.53
SNAP47Q5SQN1 AC011558.1-201ENST00000623459 338 ntBASIC18.35■□□□□ 0.53
SNAP47Q5SQN1 AL023973.1-201ENST00000624619 620 ntBASIC18.35■□□□□ 0.53
SNAP47Q5SQN1 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
SNAP47Q5SQN1 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SNAP47Q5SQN1 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
SNAP47Q5SQN1 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNAP47Q5SQN1 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.35■□□□□ 0.53
SNAP47Q5SQN1 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
SNAP47Q5SQN1 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNAP47Q5SQN1 SDHAP1-207ENST00000440850 2000 ntBASIC18.35■□□□□ 0.53
SNAP47Q5SQN1 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNAP47Q5SQN1 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SNAP47Q5SQN1 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNAP47Q5SQN1 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNAP47Q5SQN1 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNAP47Q5SQN1 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNAP47Q5SQN1 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SNAP47Q5SQN1 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNAP47Q5SQN1 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.34■□□□□ 0.53
SNAP47Q5SQN1 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SNAP47Q5SQN1 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SNAP47Q5SQN1 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.34■□□□□ 0.53
SNAP47Q5SQN1 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SNAP47Q5SQN1 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNAP47Q5SQN1 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNAP47Q5SQN1 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SNAP47Q5SQN1 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNAP47Q5SQN1 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SNAP47Q5SQN1 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SNAP47Q5SQN1 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.34■□□□□ 0.53
SNAP47Q5SQN1 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.34■□□□□ 0.53
SNAP47Q5SQN1 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNAP47Q5SQN1 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNAP47Q5SQN1 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SNAP47Q5SQN1 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.34■□□□□ 0.53
SNAP47Q5SQN1 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.34■□□□□ 0.53
SNAP47Q5SQN1 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.34■□□□□ 0.53
SNAP47Q5SQN1 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SNAP47Q5SQN1 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNAP47Q5SQN1 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNAP47Q5SQN1 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SNAP47Q5SQN1 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNAP47Q5SQN1 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.34■□□□□ 0.53
SNAP47Q5SQN1 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.33■□□□□ 0.53
SNAP47Q5SQN1 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SNAP47Q5SQN1 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SNAP47Q5SQN1 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SNAP47Q5SQN1 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
SNAP47Q5SQN1 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SNAP47Q5SQN1 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.33■□□□□ 0.53
SNAP47Q5SQN1 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SNAP47Q5SQN1 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SNAP47Q5SQN1 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.33■□□□□ 0.53
SNAP47Q5SQN1 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SNAP47Q5SQN1 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SNAP47Q5SQN1 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNAP47Q5SQN1 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNAP47Q5SQN1 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.33■□□□□ 0.52
SNAP47Q5SQN1 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.33■□□□□ 0.52
SNAP47Q5SQN1 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.33■□□□□ 0.52
SNAP47Q5SQN1 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNAP47Q5SQN1 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
SNAP47Q5SQN1 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.33■□□□□ 0.52
SNAP47Q5SQN1 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNAP47Q5SQN1 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNAP47Q5SQN1 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms