RNA–Protein interactions for RNA: ENST00000542103.5

C22orf39-205, Transcript of chromosome 22 open reading frame 39, humanhuman

TSL 1 (best) BASIC

Gene C22orf39, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C22orf39-205ENST00000542103 NISCHQ9Y2I1 1504 aa45.74■■■■■ 4.91
C22orf39-205ENST00000542103 CCDC180Q9P1Z9 1646 aa40.7■■■■■ 4.11
C22orf39-205ENST00000542103 ABCC9O60706 1549 aa40■■■■□ 3.99
C22orf39-205ENST00000542103 RB1CC1Q8TDY2 1594 aa38.36■■■■□ 3.73
C22orf39-205ENST00000542103 DCAF8L2P0C7V8 631 aa38.33■■■■□ 3.73
C22orf39-205ENST00000542103 NACADO15069 1562 aa38.27■■■■□ 3.72
C22orf39-205ENST00000542103 ZCCHC6Q5VYS8 1495 aaKnown RBP38.08■■■■□ 3.69
C22orf39-205ENST00000542103 MYO15BQ96JP2 1530 aa37.94■■■■□ 3.66
C22orf39-205ENST00000542103 DCAF1Q9Y4B6 1507 aa37.77■■■■□ 3.64
C22orf39-205ENST00000542103 UNC13AQ9UPW8 1703 aa37.63■■■■□ 3.62
C22orf39-205ENST00000542103 PABPN1Q86U42 306 aaKnown RBP eCLIP37.39■■■■□ 3.58
C22orf39-205ENST00000542103 BICRAQ9NZM4 1560 aa37.28■■■■□ 3.56
C22orf39-205ENST00000542103 SCRIBQ14160 1630 aa37.23■■■■□ 3.55
C22orf39-205ENST00000542103 DNAJC5BQ9UF47 199 aa36.85■■■■□ 3.49
C22orf39-205ENST00000542103 SHROOM4Q9ULL8 1493 aa36.7■■■■□ 3.47
C22orf39-205ENST00000542103 EIF4G1Q04637 1599 aaKnown RBP36.27■■■■□ 3.4
C22orf39-205ENST00000542103 CC2D2AQ9P2K1 1620 aa36.18■■■■□ 3.38
C22orf39-205ENST00000542103 CECR2Q9BXF3 1484 aa35.91■■■■□ 3.34
C22orf39-205ENST00000542103 SMARCA4P51532 1647 aa35.55■■■■□ 3.28
C22orf39-205ENST00000542103 BAZ1AQ9NRL2 1556 aaPredicted RBP35.44■■■■□ 3.26
C22orf39-205ENST00000542103 ATAD2BQ9ULI0 1458 aa35.35■■■■□ 3.25
C22orf39-205ENST00000542103 NCAPD3P42695 1498 aa35.3■■■■□ 3.24
C22orf39-205ENST00000542103 MROH2BQ7Z745 1585 aa35.3■■■■□ 3.24
C22orf39-205ENST00000542103 SMARCA2P51531 1590 aa35.27■■■■□ 3.24
C22orf39-205ENST00000542103 PEG3Q9GZU2 1588 aa35.15■■■■□ 3.22
C22orf39-205ENST00000542103 HMGXB3Q12766 1538 aa35.13■■■■□ 3.21
C22orf39-205ENST00000542103 BAZ1BQ9UIG0 1483 aaKnown RBP35.06■■■■□ 3.2
C22orf39-205ENST00000542103 WIZO95785 1651 aa34.96■■■■□ 3.19
C22orf39-205ENST00000542103 RSF1Q96T23 1441 aaPredicted RBP34.82■■■■□ 3.16
C22orf39-205ENST00000542103 NESP48681 1621 aa34.62■■■■□ 3.13
C22orf39-205ENST00000542103 TOP2AP11388 1531 aaKnown RBP34.5■■■■□ 3.11
C22orf39-205ENST00000542103 ERCC6Q03468 1493 aa34.44■■■■□ 3.1
C22orf39-205ENST00000542103 LAMC3Q9Y6N6 1575 aa34.41■■■■□ 3.1
C22orf39-205ENST00000542103 CADPSQ9ULU8 1353 aa34.28■■■■□ 3.08
C22orf39-205ENST00000542103 KIF21AQ7Z4S6 1674 aa34.22■■■■□ 3.07
C22orf39-205ENST00000542103 PDS5BQ9NTI5 1447 aa34.16■■■■□ 3.06
C22orf39-205ENST00000542103 CCDC88BA6NC98 1476 aa34.12■■■■□ 3.05
C22orf39-205ENST00000542103 THOC2Q8NI27 1593 aaKnown RBP34.08■■■■□ 3.05
C22orf39-205ENST00000542103 CFTRP13569 1480 aa34.07■■■■□ 3.04
C22orf39-205ENST00000542103 CUX2O14529 1486 aa34.06■■■■□ 3.04
C22orf39-205ENST00000542103 FANCD2Q9BXW9 1451 aa33.93■■■■□ 3.02
C22orf39-205ENST00000542103 SUPT5HO00267 1087 aaKnown RBP33.92■■■■□ 3.02
C22orf39-205ENST00000542103 CEP164Q9UPV0 1460 aa33.89■■■■□ 3.02
C22orf39-205ENST00000542103 PRDM2Q13029 1718 aa33.87■■■■□ 3.01
C22orf39-205ENST00000542103 MRC2Q9UBG0 1479 aa33.85■■■■□ 3.01
C22orf39-205ENST00000542103 WDR62O43379 1518 aa33.76■■■□□ 2.99
C22orf39-205ENST00000542103 URB2Q14146 1524 aaKnown RBP33.63■■■□□ 2.97
C22orf39-205ENST00000542103 TOPBP1Q92547 1522 aa33.38■■■□□ 2.93
C22orf39-205ENST00000542103 DNMBPQ6XZF7 1577 aa33.33■■■□□ 2.93
C22orf39-205ENST00000542103 ABCC8Q09428 1581 aa33.28■■■□□ 2.92
C22orf39-205ENST00000542103 DNAJC5Q9H3Z4 198 aa33.18■■■□□ 2.9
C22orf39-205ENST00000542103 IFT140Q96RY7 1462 aa33.15■■■□□ 2.9
C22orf39-205ENST00000542103 CUX1P39880 1505 aa33.13■■■□□ 2.89
C22orf39-205ENST00000542103 ZNF608Q9ULD9 1512 aaPredicted RBP33.1■■■□□ 2.89
C22orf39-205ENST00000542103 POLA1P09884 1462 aaPredicted RBP33.09■■■□□ 2.89
C22orf39-205ENST00000542103 TARBP1Q13395 1621 aaKnown RBP33.05■■■□□ 2.88
C22orf39-205ENST00000542103 FGD5Q6ZNL6 1462 aa33.01■■■□□ 2.88
C22orf39-205ENST00000542103 RAD54L2Q9Y4B4 1467 aa33■■■□□ 2.87
C22orf39-205ENST00000542103 EIF4G3O43432 1585 aaKnown RBP32.96■■■□□ 2.87
C22orf39-205ENST00000542103 SOGA1O94964 1423 aa32.94■■■□□ 2.86
C22orf39-205ENST00000542103 AQRO60306 1485 aaKnown RBP eCLIP32.89■■■□□ 2.861e-7■■□□□ 13.1
C22orf39-205ENST00000542103 SYNJ1O43426 1573 aa32.82■■■□□ 2.84
C22orf39-205ENST00000542103 WRNQ14191 1432 aaPredicted RBP eCLIP32.82■■■□□ 2.845e-6■■□□□ 12.5
C22orf39-205ENST00000542103 TDRD9Q8NDG6 1382 aaKnown RBP32.8■■■□□ 2.84
C22orf39-205ENST00000542103 BIVM-ERCC5R4GMW8 1640 aa32.79■■■□□ 2.84
C22orf39-205ENST00000542103 TOP2BQ02880 1626 aa32.78■■■□□ 2.84
C22orf39-205ENST00000542103 WDR97A6NE52 1622 aa32.77■■■□□ 2.84
C22orf39-205ENST00000542103 OSCARQ8IYS5 282 aa32.65■■■□□ 2.82
C22orf39-205ENST00000542103 ABCA10Q8WWZ4 1543 aa32.64■■■□□ 2.82
C22orf39-205ENST00000542103 CHD1O14646 1710 aa32.6■■■□□ 2.81
C22orf39-205ENST00000542103 SNAPC4Q5SXM2 1469 aa32.57■■■□□ 2.8
C22orf39-205ENST00000542103 PBRM1Q86U86 1689 aa32.57■■■□□ 2.8
C22orf39-205ENST00000542103 GAPVD1Q14C86 1478 aa32.56■■■□□ 2.8
C22orf39-205ENST00000542103 ABCA5Q8WWZ7 1642 aa32.56■■■□□ 2.8
C22orf39-205ENST00000542103 GRIN2BQ13224 1484 aa32.54■■■□□ 2.8
C22orf39-205ENST00000542103 FBLN2P98095 1184 aa32.51■■■□□ 2.8
C22orf39-205ENST00000542103 MAGI1Q96QZ7 1491 aaPredicted RBP32.46■■■□□ 2.79
C22orf39-205ENST00000542103 CHMP7Q8WUX9 453 aaPredicted RBP32.36■■■□□ 2.77
C22orf39-205ENST00000542103 SYNJ2O15056 1496 aa32.36■■■□□ 2.77
C22orf39-205ENST00000542103 ADAMTS12P58397 1594 aa32.26■■■□□ 2.76
C22orf39-205ENST00000542103 ERICH3Q5RHP9 1530 aa32.24■■■□□ 2.75
C22orf39-205ENST00000542103 RIMBP3CA6NJZ7 1639 aa32.23■■■□□ 2.75
C22orf39-205ENST00000542103 RIMBP3BA6NNM3 1639 aa32.23■■■□□ 2.75
C22orf39-205ENST00000542103 RIMBP3Q9UFD9 1639 aa32.23■■■□□ 2.75
C22orf39-205ENST00000542103 CLASP1Q7Z460 1538 aa32.18■■■□□ 2.74
C22orf39-205ENST00000542103 ARHGEF11O15085 1522 aa32.18■■■□□ 2.74
C22orf39-205ENST00000542103 GRIN2AQ12879 1464 aa32.15■■■□□ 2.74
C22orf39-205ENST00000542103 FHAD1B1AJZ9 1412 aa32.15■■■□□ 2.74
C22orf39-205ENST00000542103 TRIM41Q8WV44 630 aa32.13■■■□□ 2.73
C22orf39-205ENST00000542103 KIF27Q86VH2 1401 aa32.11■■■□□ 2.73
C22orf39-205ENST00000542103 CEP170Q5SW79 1584 aa32.05■■■□□ 2.72
C22orf39-205ENST00000542103 IGF1RP08069 1367 aa32.03■■■□□ 2.72
C22orf39-205ENST00000542103 NUP160Q12769 1436 aa31.99■■■□□ 2.71
C22orf39-205ENST00000542103 CUL7Q14999 1698 aa31.95■■■□□ 2.7
C22orf39-205ENST00000542103 RUSC2Q8N2Y8 1516 aa31.92■■■□□ 2.7
C22orf39-205ENST00000542103 ARAP1Q96P48 1450 aa31.92■■■□□ 2.7
C22orf39-205ENST00000542103 CYB5RLQ6IPT4 315 aa31.9■■■□□ 2.7
C22orf39-205ENST00000542103 CARMIL1Q5VZK9 1371 aa31.83■■■□□ 2.69
C22orf39-205ENST00000542103 ERCC6L2Q5T890 1561 aa31.81■■■□□ 2.68
C22orf39-205ENST00000542103 SHROOM2Q13796 1616 aa31.8■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms