Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COL1A2P08123 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.74■□□□□ 0.91
COL1A2P08123 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.74■□□□□ 0.91
COL1A2P08123 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.74■□□□□ 0.91
COL1A2P08123 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL1A2P08123 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.74■□□□□ 0.91
COL1A2P08123 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL1A2P08123 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COL1A2P08123 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
COL1A2P08123 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COL1A2P08123 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL1A2P08123 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.74■□□□□ 0.91
COL1A2P08123 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
COL1A2P08123 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COL1A2P08123 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL1A2P08123 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.73■□□□□ 0.91
COL1A2P08123 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
COL1A2P08123 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.73■□□□□ 0.91
COL1A2P08123 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COL1A2P08123 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
COL1A2P08123 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.73■□□□□ 0.91
COL1A2P08123 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COL1A2P08123 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.73■□□□□ 0.91
COL1A2P08123 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.73■□□□□ 0.91
COL1A2P08123 AC068587.9-201ENST00000641814 219 ntBASIC20.73■□□□□ 0.91
COL1A2P08123 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COL1A2P08123 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL1A2P08123 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.73■□□□□ 0.91
COL1A2P08123 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL1A2P08123 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.73■□□□□ 0.91
COL1A2P08123 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.73■□□□□ 0.91
COL1A2P08123 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.73■□□□□ 0.91
COL1A2P08123 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
COL1A2P08123 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.73■□□□□ 0.91
COL1A2P08123 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL1A2P08123 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL1A2P08123 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL1A2P08123 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.72■□□□□ 0.91
COL1A2P08123 AC092597.1-201ENST00000487352 616 ntBASIC20.72■□□□□ 0.91
COL1A2P08123 AC104390.1-201ENST00000555663 520 ntBASIC20.72■□□□□ 0.91
COL1A2P08123 AC069148.1-201ENST00000608741 768 ntBASIC20.72■□□□□ 0.91
COL1A2P08123 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL1A2P08123 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL1A2P08123 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL1A2P08123 AL032819.2-201ENST00000624543 2162 ntBASIC20.72■□□□□ 0.91
COL1A2P08123 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
COL1A2P08123 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL1A2P08123 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL1A2P08123 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL1A2P08123 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL1A2P08123 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL1A2P08123 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL1A2P08123 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.72■□□□□ 0.91
COL1A2P08123 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.72■□□□□ 0.91
COL1A2P08123 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
COL1A2P08123 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL1A2P08123 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.72■□□□□ 0.91
COL1A2P08123 AL157888.1-201ENST00000631930 593 ntBASIC20.72■□□□□ 0.91
COL1A2P08123 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COL1A2P08123 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
COL1A2P08123 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL1A2P08123 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL1A2P08123 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.71■□□□□ 0.91
COL1A2P08123 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL1A2P08123 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.71■□□□□ 0.91
COL1A2P08123 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL1A2P08123 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL1A2P08123 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL1A2P08123 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
COL1A2P08123 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL1A2P08123 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.71■□□□□ 0.91
COL1A2P08123 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL1A2P08123 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL1A2P08123 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
COL1A2P08123 AC034236.2-201ENST00000606662 1610 ntBASIC20.71■□□□□ 0.91
COL1A2P08123 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL1A2P08123 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
COL1A2P08123 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL1A2P08123 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.71■□□□□ 0.91
COL1A2P08123 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COL1A2P08123 AL645929.1-201ENST00000420084 975 ntBASIC20.71■□□□□ 0.91
COL1A2P08123 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.71■□□□□ 0.91
COL1A2P08123 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.71■□□□□ 0.91
COL1A2P08123 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.71■□□□□ 0.91
COL1A2P08123 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.71■□□□□ 0.91
COL1A2P08123 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
COL1A2P08123 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COL1A2P08123 AC093484.2-201ENST00000580996 2166 ntBASIC20.7■□□□□ 0.91
COL1A2P08123 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
COL1A2P08123 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL1A2P08123 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL1A2P08123 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL1A2P08123 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL1A2P08123 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.7■□□□□ 0.9
COL1A2P08123 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
COL1A2P08123 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL1A2P08123 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL1A2P08123 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL1A2P08123 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL1A2P08123 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms