RNA–Protein interactions for RNA: ENST00000555663.1

AC104390.1-201, humanhuman

BASIC

Gene AC104390.1, Length 520 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC104390.1-201ENST00000555663 NISCHQ9Y2I1 1504 aa44.09■■■■■ 4.65
AC104390.1-201ENST00000555663 CCDC180Q9P1Z9 1646 aa39■■■■□ 3.83
AC104390.1-201ENST00000555663 ABCC9O60706 1549 aa37.61■■■■□ 3.61
AC104390.1-201ENST00000555663 ZCCHC6Q5VYS8 1495 aaKnown RBP36.83■■■■□ 3.49
AC104390.1-201ENST00000555663 DCAF8L2P0C7V8 631 aa36.61■■■■□ 3.45
AC104390.1-201ENST00000555663 DCAF1Q9Y4B6 1507 aa36.54■■■■□ 3.44
AC104390.1-201ENST00000555663 NACADO15069 1562 aa36.54■■■■□ 3.44
AC104390.1-201ENST00000555663 MYO15BQ96JP2 1530 aa36.52■■■■□ 3.44
AC104390.1-201ENST00000555663 RB1CC1Q8TDY2 1594 aa36.44■■■■□ 3.42
AC104390.1-201ENST00000555663 UNC13AQ9UPW8 1703 aa35.62■■■■□ 3.29
AC104390.1-201ENST00000555663 SCRIBQ14160 1630 aa35.57■■■■□ 3.28
AC104390.1-201ENST00000555663 BICRAQ9NZM4 1560 aa35.31■■■■□ 3.24
AC104390.1-201ENST00000555663 PABPN1Q86U42 306 aaKnown RBP eCLIP35.23■■■■□ 3.23
AC104390.1-201ENST00000555663 SHROOM4Q9ULL8 1493 aa35.08■■■■□ 3.21
AC104390.1-201ENST00000555663 EIF4G1Q04637 1599 aaKnown RBP34.33■■■■□ 3.09
AC104390.1-201ENST00000555663 CECR2Q9BXF3 1484 aa34.27■■■■□ 3.08
AC104390.1-201ENST00000555663 BAZ1AQ9NRL2 1556 aaPredicted RBP34.15■■■■□ 3.06
AC104390.1-201ENST00000555663 SMARCA4P51532 1647 aa34.1■■■■□ 3.05
AC104390.1-201ENST00000555663 DNAJC5BQ9UF47 199 aa34.07■■■■□ 3.04
AC104390.1-201ENST00000555663 CC2D2AQ9P2K1 1620 aa34.07■■■■□ 3.04
AC104390.1-201ENST00000555663 MROH2BQ7Z745 1585 aa33.98■■■■□ 3.03
AC104390.1-201ENST00000555663 ATAD2BQ9ULI0 1458 aa33.79■■■■□ 3
AC104390.1-201ENST00000555663 RSF1Q96T23 1441 aaPredicted RBP33.79■■■■□ 3
AC104390.1-201ENST00000555663 SMARCA2P51531 1590 aa33.78■■■■□ 3
AC104390.1-201ENST00000555663 PEG3Q9GZU2 1588 aa33.78■■■■□ 3
AC104390.1-201ENST00000555663 NCAPD3P42695 1498 aa33.71■■■□□ 2.99
AC104390.1-201ENST00000555663 WIZO95785 1651 aa33.64■■■□□ 2.98
AC104390.1-201ENST00000555663 HMGXB3Q12766 1538 aa33.58■■■□□ 2.97
AC104390.1-201ENST00000555663 BAZ1BQ9UIG0 1483 aaKnown RBP33.53■■■□□ 2.96
AC104390.1-201ENST00000555663 TOP2AP11388 1531 aaKnown RBP33.32■■■□□ 2.92
AC104390.1-201ENST00000555663 SUPT5HO00267 1087 aaKnown RBP33.29■■■□□ 2.92
AC104390.1-201ENST00000555663 CCDC88BA6NC98 1476 aa32.93■■■□□ 2.86
AC104390.1-201ENST00000555663 CADPSQ9ULU8 1353 aa32.75■■■□□ 2.83
AC104390.1-201ENST00000555663 LAMC3Q9Y6N6 1575 aa32.74■■■□□ 2.83
AC104390.1-201ENST00000555663 NESP48681 1621 aa32.69■■■□□ 2.82
AC104390.1-201ENST00000555663 CFTRP13569 1480 aa32.67■■■□□ 2.82
AC104390.1-201ENST00000555663 PDS5BQ9NTI5 1447 aa32.5■■■□□ 2.79
AC104390.1-201ENST00000555663 PRDM2Q13029 1718 aa32.46■■■□□ 2.79
AC104390.1-201ENST00000555663 ERCC6Q03468 1493 aa32.37■■■□□ 2.77
AC104390.1-201ENST00000555663 FANCD2Q9BXW9 1451 aa32.35■■■□□ 2.77
AC104390.1-201ENST00000555663 KIF21AQ7Z4S6 1674 aa32.34■■■□□ 2.77
AC104390.1-201ENST00000555663 CEP164Q9UPV0 1460 aa32.26■■■□□ 2.75
AC104390.1-201ENST00000555663 MRC2Q9UBG0 1479 aa32.11■■■□□ 2.73
AC104390.1-201ENST00000555663 THOC2Q8NI27 1593 aaKnown RBP32.11■■■□□ 2.73
AC104390.1-201ENST00000555663 WDR62O43379 1518 aa32■■■□□ 2.71
AC104390.1-201ENST00000555663 URB2Q14146 1524 aaKnown RBP32■■■□□ 2.71
AC104390.1-201ENST00000555663 ABCC8Q09428 1581 aa31.97■■■□□ 2.71
AC104390.1-201ENST00000555663 DNMBPQ6XZF7 1577 aa31.91■■■□□ 2.7
AC104390.1-201ENST00000555663 TOPBP1Q92547 1522 aa31.9■■■□□ 2.7
AC104390.1-201ENST00000555663 CUX2O14529 1486 aa31.89■■■□□ 2.7
AC104390.1-201ENST00000555663 CUX1P39880 1505 aa31.84■■■□□ 2.69
AC104390.1-201ENST00000555663 WRNQ14191 1432 aaPredicted RBP eCLIP31.83■■■□□ 2.69
AC104390.1-201ENST00000555663 TOP2BQ02880 1626 aa31.73■■■□□ 2.67
AC104390.1-201ENST00000555663 BIVM-ERCC5R4GMW8 1640 aa31.72■■■□□ 2.67
AC104390.1-201ENST00000555663 SYNJ1O43426 1573 aa31.72■■■□□ 2.67
AC104390.1-201ENST00000555663 POLA1P09884 1462 aaPredicted RBP31.65■■■□□ 2.66
AC104390.1-201ENST00000555663 FGD5Q6ZNL6 1462 aa31.65■■■□□ 2.66
AC104390.1-201ENST00000555663 IFT140Q96RY7 1462 aa31.59■■■□□ 2.65
AC104390.1-201ENST00000555663 SOGA1O94964 1423 aa31.56■■■□□ 2.64
AC104390.1-201ENST00000555663 TARBP1Q13395 1621 aaKnown RBP31.52■■■□□ 2.64
AC104390.1-201ENST00000555663 RAD54L2Q9Y4B4 1467 aa31.51■■■□□ 2.63
AC104390.1-201ENST00000555663 TRIM41Q8WV44 630 aa31.45■■■□□ 2.63
AC104390.1-201ENST00000555663 CHIC1Q5VXU3 224 aa31.41■■■□□ 2.62
AC104390.1-201ENST00000555663 ABCA10Q8WWZ4 1543 aa31.39■■■□□ 2.62
AC104390.1-201ENST00000555663 WDR97A6NE52 1622 aa31.38■■■□□ 2.61
AC104390.1-201ENST00000555663 ZNF608Q9ULD9 1512 aaPredicted RBP31.36■■■□□ 2.61
AC104390.1-201ENST00000555663 TDRD9Q8NDG6 1382 aaKnown RBP31.3■■■□□ 2.6
AC104390.1-201ENST00000555663 AQRO60306 1485 aaKnown RBP eCLIP31.27■■■□□ 2.6
AC104390.1-201ENST00000555663 EIF4G3O43432 1585 aaKnown RBP31.26■■■□□ 2.6
AC104390.1-201ENST00000555663 ABCA5Q8WWZ7 1642 aa31.21■■■□□ 2.59
AC104390.1-201ENST00000555663 GAPVD1Q14C86 1478 aa31.2■■■□□ 2.58
AC104390.1-201ENST00000555663 KIF27Q86VH2 1401 aa31.15■■■□□ 2.58
AC104390.1-201ENST00000555663 GRIN2BQ13224 1484 aa31.12■■■□□ 2.57
AC104390.1-201ENST00000555663 PBRM1Q86U86 1689 aa31.09■■■□□ 2.57
AC104390.1-201ENST00000555663 ERICH3Q5RHP9 1530 aa31.03■■■□□ 2.56
AC104390.1-201ENST00000555663 RUSC2Q8N2Y8 1516 aa30.99■■■□□ 2.55
AC104390.1-201ENST00000555663 MAGI1Q96QZ7 1491 aaPredicted RBP30.99■■■□□ 2.55
AC104390.1-201ENST00000555663 SNAPC4Q5SXM2 1469 aa30.98■■■□□ 2.55
AC104390.1-201ENST00000555663 IGF1RP08069 1367 aa30.96■■■□□ 2.55
AC104390.1-201ENST00000555663 EEA1Q15075 1411 aa30.91■■■□□ 2.54
AC104390.1-201ENST00000555663 FHAD1B1AJZ9 1412 aa30.86■■■□□ 2.53
AC104390.1-201ENST00000555663 ADAMTS12P58397 1594 aa30.86■■■□□ 2.53
AC104390.1-201ENST00000555663 SYNJ2O15056 1496 aa30.85■■■□□ 2.53
AC104390.1-201ENST00000555663 CUL7Q14999 1698 aa30.84■■■□□ 2.53
AC104390.1-201ENST00000555663 CHMP7Q8WUX9 453 aaPredicted RBP30.81■■■□□ 2.52
AC104390.1-201ENST00000555663 CSRNP3Q8WYN3 585 aa30.79■■■□□ 2.52
AC104390.1-201ENST00000555663 CARMIL1Q5VZK9 1371 aa30.79■■■□□ 2.52
AC104390.1-201ENST00000555663 CHD1O14646 1710 aa30.78■■■□□ 2.52
AC104390.1-201ENST00000555663 FBLN2P98095 1184 aa30.78■■■□□ 2.52
AC104390.1-201ENST00000555663 FAM9AQ8IZU1 332 aaPredicted RBP30.74■■■□□ 2.51
AC104390.1-201ENST00000555663 GRIN2AQ12879 1464 aa30.71■■■□□ 2.51
AC104390.1-201ENST00000555663 OSCARQ8IYS5 282 aa30.68■■■□□ 2.5
AC104390.1-201ENST00000555663 PRXQ9BXM0 1461 aa30.68■■■□□ 2.5
AC104390.1-201ENST00000555663 RAPGEF2Q9Y4G8 1499 aa30.66■■■□□ 2.5
AC104390.1-201ENST00000555663 NUP160Q12769 1436 aa30.56■■■□□ 2.48
AC104390.1-201ENST00000555663 KIF21BO75037 1637 aa30.53■■■□□ 2.48
AC104390.1-201ENST00000555663 CEP170Q5SW79 1584 aa30.53■■■□□ 2.48
AC104390.1-201ENST00000555663 CLASP1Q7Z460 1538 aa30.47■■■□□ 2.47
AC104390.1-201ENST00000555663 KIAA0586Q9BVV6 1533 aa30.42■■■□□ 2.46
AC104390.1-201ENST00000555663 GOLGA3Q08378 1498 aa30.38■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms