RNA–Protein interactions for RNA: ENST00000297347.7

MED30-201, Transcript of mediator complex subunit 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED30, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED30-201ENST00000297347 NISCHQ9Y2I1 1504 aa45.87■■■■■ 4.93
MED30-201ENST00000297347 ABCC9O60706 1549 aa41.31■■■■■ 4.2
MED30-201ENST00000297347 CCDC180Q9P1Z9 1646 aa41.18■■■■■ 4.18
MED30-201ENST00000297347 RB1CC1Q8TDY2 1594 aa39.26■■■■□ 3.88
MED30-201ENST00000297347 NACADO15069 1562 aa38.98■■■■□ 3.83
MED30-201ENST00000297347 DNAJC5BQ9UF47 199 aa38.87■■■■□ 3.81
MED30-201ENST00000297347 DCAF8L2P0C7V8 631 aa38.74■■■■□ 3.79
MED30-201ENST00000297347 PABPN1Q86U42 306 aaKnown RBP eCLIP38.45■■■■□ 3.75
MED30-201ENST00000297347 MYO15BQ96JP2 1530 aa38.42■■■■□ 3.74
MED30-201ENST00000297347 UNC13AQ9UPW8 1703 aa38.35■■■■□ 3.73
MED30-201ENST00000297347 BICRAQ9NZM4 1560 aa38.14■■■■□ 3.7
MED30-201ENST00000297347 ZCCHC6Q5VYS8 1495 aaKnown RBP38.01■■■■□ 3.67
MED30-201ENST00000297347 DCAF1Q9Y4B6 1507 aa37.89■■■■□ 3.66
MED30-201ENST00000297347 SHROOM4Q9ULL8 1493 aa37.61■■■■□ 3.61
MED30-201ENST00000297347 SCRIBQ14160 1630 aa37.54■■■■□ 3.6
MED30-201ENST00000297347 CC2D2AQ9P2K1 1620 aa37.31■■■■□ 3.56
MED30-201ENST00000297347 CECR2Q9BXF3 1484 aa37.23■■■■□ 3.55
MED30-201ENST00000297347 EIF4G1Q04637 1599 aaKnown RBP37.21■■■■□ 3.55
MED30-201ENST00000297347 NCAPD3P42695 1498 aa36■■■■□ 3.35
MED30-201ENST00000297347 ATAD2BQ9ULI0 1458 aa35.88■■■■□ 3.33
MED30-201ENST00000297347 SMARCA4P51532 1647 aa35.8■■■■□ 3.32
MED30-201ENST00000297347 DNAJC5Q9H3Z4 198 aa35.75■■■■□ 3.31
MED30-201ENST00000297347 SMARCA2P51531 1590 aa35.75■■■■□ 3.31
MED30-201ENST00000297347 HMGXB3Q12766 1538 aa35.71■■■■□ 3.31
MED30-201ENST00000297347 ERCC6Q03468 1493 aa35.67■■■■□ 3.3
MED30-201ENST00000297347 CUX2O14529 1486 aa35.64■■■■□ 3.3
MED30-201ENST00000297347 BAZ1AQ9NRL2 1556 aaPredicted RBP35.61■■■■□ 3.29
MED30-201ENST00000297347 BAZ1BQ9UIG0 1483 aaKnown RBP35.51■■■■□ 3.28
MED30-201ENST00000297347 PEG3Q9GZU2 1588 aa35.47■■■■□ 3.27
MED30-201ENST00000297347 NESP48681 1621 aa35.46■■■■□ 3.27
MED30-201ENST00000297347 MROH2BQ7Z745 1585 aa35.35■■■■□ 3.25
MED30-201ENST00000297347 LAMC3Q9Y6N6 1575 aa35.18■■■■□ 3.22
MED30-201ENST00000297347 THOC2Q8NI27 1593 aaKnown RBP35.13■■■■□ 3.21
MED30-201ENST00000297347 PDS5BQ9NTI5 1447 aa34.99■■■■□ 3.19
MED30-201ENST00000297347 KIF21AQ7Z4S6 1674 aa34.98■■■■□ 3.19
MED30-201ENST00000297347 WIZO95785 1651 aa34.91■■■■□ 3.18
MED30-201ENST00000297347 CADPSQ9ULU8 1353 aa34.89■■■■□ 3.18
MED30-201ENST00000297347 MRC2Q9UBG0 1479 aa34.71■■■■□ 3.15
MED30-201ENST00000297347 WDR62O43379 1518 aa34.63■■■■□ 3.13
MED30-201ENST00000297347 RSF1Q96T23 1441 aaPredicted RBP34.59■■■■□ 3.13
MED30-201ENST00000297347 CEP164Q9UPV0 1460 aa34.54■■■■□ 3.12
MED30-201ENST00000297347 FANCD2Q9BXW9 1451 aa34.5■■■■□ 3.11
MED30-201ENST00000297347 CFTRP13569 1480 aa34.48■■■■□ 3.11
MED30-201ENST00000297347 TOP2AP11388 1531 aaKnown RBP34.47■■■■□ 3.11
MED30-201ENST00000297347 URB2Q14146 1524 aaKnown RBP34.24■■■■□ 3.07
MED30-201ENST00000297347 TRIM41Q8WV44 630 aa34.13■■■■□ 3.05
MED30-201ENST00000297347 CCDC88BA6NC98 1476 aa34.09■■■■□ 3.05
MED30-201ENST00000297347 PRDM2Q13029 1718 aa34.07■■■■□ 3.05
MED30-201ENST00000297347 OSCARQ8IYS5 282 aa33.99■■■■□ 3.03
MED30-201ENST00000297347 IFT140Q96RY7 1462 aa33.86■■■■□ 3.01
MED30-201ENST00000297347 TOPBP1Q92547 1522 aa33.84■■■■□ 3.01
MED30-201ENST00000297347 ZNF608Q9ULD9 1512 aaPredicted RBP33.83■■■■□ 3.01
MED30-201ENST00000297347 ABCC8Q09428 1581 aa33.74■■■□□ 2.99
MED30-201ENST00000297347 DNMBPQ6XZF7 1577 aa33.69■■■□□ 2.98
MED30-201ENST00000297347 EIF4G3O43432 1585 aaKnown RBP33.62■■■□□ 2.97
MED30-201ENST00000297347 RIMBP3CA6NJZ7 1639 aa33.57■■■□□ 2.96
MED30-201ENST00000297347 RIMBP3BA6NNM3 1639 aa33.57■■■□□ 2.96
MED30-201ENST00000297347 RIMBP3Q9UFD9 1639 aa33.57■■■□□ 2.96
MED30-201ENST00000297347 TARBP1Q13395 1621 aaKnown RBP33.54■■■□□ 2.96
MED30-201ENST00000297347 AQRO60306 1485 aaKnown RBP eCLIP33.5■■■□□ 2.956e-6■■■■□ 25.1
MED30-201ENST00000297347 POLA1P09884 1462 aaPredicted RBP33.49■■■□□ 2.95
MED30-201ENST00000297347 ARHGEF11O15085 1522 aa33.46■■■□□ 2.95
MED30-201ENST00000297347 RAD54L2Q9Y4B4 1467 aa33.37■■■□□ 2.93
MED30-201ENST00000297347 CHD1O14646 1710 aa33.36■■■□□ 2.93
MED30-201ENST00000297347 SOGA1O94964 1423 aa33.33■■■□□ 2.93
MED30-201ENST00000297347 FBLN2P98095 1184 aa33.28■■■□□ 2.92
MED30-201ENST00000297347 TDRD9Q8NDG6 1382 aaKnown RBP33.28■■■□□ 2.92
MED30-201ENST00000297347 FGD5Q6ZNL6 1462 aa33.26■■■□□ 2.92
MED30-201ENST00000297347 CUX1P39880 1505 aa33.23■■■□□ 2.91
MED30-201ENST00000297347 CYB5RLQ6IPT4 315 aa33.21■■■□□ 2.91
MED30-201ENST00000297347 WDR97A6NE52 1622 aa33.18■■■□□ 2.9
MED30-201ENST00000297347 SNAPC4Q5SXM2 1469 aa33.16■■■□□ 2.9
MED30-201ENST00000297347 ARAP1Q96P48 1450 aa33.13■■■□□ 2.89
MED30-201ENST00000297347 GRIN2BQ13224 1484 aa33.05■■■□□ 2.88
MED30-201ENST00000297347 MAGI1Q96QZ7 1491 aaPredicted RBP33.05■■■□□ 2.88
MED30-201ENST00000297347 CHMP7Q8WUX9 453 aaPredicted RBP33.02■■■□□ 2.88
MED30-201ENST00000297347 CLASP1Q7Z460 1538 aa33.02■■■□□ 2.88
MED30-201ENST00000297347 SYNJ1O43426 1573 aa32.96■■■□□ 2.87
MED30-201ENST00000297347 SUPT5HO00267 1087 aaKnown RBP32.96■■■□□ 2.87
MED30-201ENST00000297347 SYNJ2O15056 1496 aa32.95■■■□□ 2.87
MED30-201ENST00000297347 GAPVD1Q14C86 1478 aa32.92■■■□□ 2.86
MED30-201ENST00000297347 PBRM1Q86U86 1689 aa32.89■■■□□ 2.86
MED30-201ENST00000297347 ABCA10Q8WWZ4 1543 aa32.88■■■□□ 2.85
MED30-201ENST00000297347 TRHP20396 242 aaPredicted RBP32.86■■■□□ 2.85
MED30-201ENST00000297347 ABCA5Q8WWZ7 1642 aa32.84■■■□□ 2.85
MED30-201ENST00000297347 WRNQ14191 1432 aaPredicted RBP eCLIP32.72■■■□□ 2.83
MED30-201ENST00000297347 TOP2BQ02880 1626 aa32.65■■■□□ 2.82
MED30-201ENST00000297347 BIVM-ERCC5R4GMW8 1640 aa32.65■■■□□ 2.82
MED30-201ENST00000297347 GRIN2AQ12879 1464 aa32.63■■■□□ 2.81
MED30-201ENST00000297347 ADAMTS12P58397 1594 aa32.6■■■□□ 2.81
MED30-201ENST00000297347 NUP160Q12769 1436 aa32.53■■■□□ 2.8
MED30-201ENST00000297347 CEP170Q5SW79 1584 aa32.52■■■□□ 2.8
MED30-201ENST00000297347 FHAD1B1AJZ9 1412 aa32.51■■■□□ 2.79
MED30-201ENST00000297347 ERCC6L2Q5T890 1561 aa32.5■■■□□ 2.79
MED30-201ENST00000297347 ERICH3Q5RHP9 1530 aa32.46■■■□□ 2.79
MED30-201ENST00000297347 SHROOM2Q13796 1616 aa32.39■■■□□ 2.78
MED30-201ENST00000297347 PRG4Q92954 1404 aaPredicted RBP32.22■■■□□ 2.75
MED30-201ENST00000297347 JPH4Q96JJ6 628 aa32.18■■■□□ 2.74
MED30-201ENST00000297347 RUSC2Q8N2Y8 1516 aa32.14■■■□□ 2.74
MED30-201ENST00000297347 IGF1RP08069 1367 aa32.04■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms