Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 C1QL1P1-201ENST00000568105 661 ntBASIC13.82□□□□□ -0.2
TRGV1A0A0A0MS02 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC13.82□□□□□ -0.2
TRGV1A0A0A0MS02 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
TRGV1A0A0A0MS02 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
TRGV1A0A0A0MS02 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC13.82□□□□□ -0.2
TRGV1A0A0A0MS02 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRGV1A0A0A0MS02 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
TRGV1A0A0A0MS02 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRGV1A0A0A0MS02 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
TRGV1A0A0A0MS02 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
TRGV1A0A0A0MS02 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRGV1A0A0A0MS02 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRGV1A0A0A0MS02 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRGV1A0A0A0MS02 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRGV1A0A0A0MS02 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC13.82□□□□□ -0.2
TRGV1A0A0A0MS02 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
TRGV1A0A0A0MS02 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRGV1A0A0A0MS02 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC13.82□□□□□ -0.2
TRGV1A0A0A0MS02 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRGV1A0A0A0MS02 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRGV1A0A0A0MS02 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
TRGV1A0A0A0MS02 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
TRGV1A0A0A0MS02 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
TRGV1A0A0A0MS02 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC13.81□□□□□ -0.2
TRGV1A0A0A0MS02 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRGV1A0A0A0MS02 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRGV1A0A0A0MS02 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
TRGV1A0A0A0MS02 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRGV1A0A0A0MS02 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TRGV1A0A0A0MS02 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRGV1A0A0A0MS02 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
TRGV1A0A0A0MS02 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
TRGV1A0A0A0MS02 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
TRGV1A0A0A0MS02 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRGV1A0A0A0MS02 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
TRGV1A0A0A0MS02 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRGV1A0A0A0MS02 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC13.81□□□□□ -0.2
TRGV1A0A0A0MS02 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRGV1A0A0A0MS02 KRT16P5-201ENST00000455284 522 ntBASIC13.81□□□□□ -0.2
TRGV1A0A0A0MS02 DENND3-207ENST00000518347 850 ntTSL 2 BASIC13.81□□□□□ -0.2
TRGV1A0A0A0MS02 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC13.81□□□□□ -0.2
TRGV1A0A0A0MS02 C1QBPP2-201ENST00000528754 825 ntBASIC13.81□□□□□ -0.2
TRGV1A0A0A0MS02 RN7SL471P-201ENST00000580476 299 ntBASIC13.81□□□□□ -0.2
TRGV1A0A0A0MS02 AC124016.1-201ENST00000609552 612 ntBASIC13.81□□□□□ -0.2
TRGV1A0A0A0MS02 AC110285.5-201ENST00000611501 352 ntBASIC13.81□□□□□ -0.2
TRGV1A0A0A0MS02 CABP2-204ENST00000636477 941 ntTSL 5 BASIC13.81□□□□□ -0.2
TRGV1A0A0A0MS02 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC13.81□□□□□ -0.2
TRGV1A0A0A0MS02 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRGV1A0A0A0MS02 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC13.81□□□□□ -0.2
TRGV1A0A0A0MS02 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRGV1A0A0A0MS02 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC13.81□□□□□ -0.2
TRGV1A0A0A0MS02 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRGV1A0A0A0MS02 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRGV1A0A0A0MS02 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRGV1A0A0A0MS02 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRGV1A0A0A0MS02 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TRGV1A0A0A0MS02 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRGV1A0A0A0MS02 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRGV1A0A0A0MS02 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRGV1A0A0A0MS02 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRGV1A0A0A0MS02 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC13.8□□□□□ -0.2
TRGV1A0A0A0MS02 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC13.8□□□□□ -0.2
TRGV1A0A0A0MS02 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC13.8□□□□□ -0.2
TRGV1A0A0A0MS02 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC13.8□□□□□ -0.2
TRGV1A0A0A0MS02 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRGV1A0A0A0MS02 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC13.8□□□□□ -0.2
TRGV1A0A0A0MS02 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC13.8□□□□□ -0.2
TRGV1A0A0A0MS02 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TRGV1A0A0A0MS02 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRGV1A0A0A0MS02 ISG20-202ENST00000379224 540 ntTSL 3 BASIC13.8□□□□□ -0.2
TRGV1A0A0A0MS02 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC13.8□□□□□ -0.2
TRGV1A0A0A0MS02 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC13.8□□□□□ -0.2
TRGV1A0A0A0MS02 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRGV1A0A0A0MS02 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC13.8□□□□□ -0.2
TRGV1A0A0A0MS02 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRGV1A0A0A0MS02 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TRGV1A0A0A0MS02 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRGV1A0A0A0MS02 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TRGV1A0A0A0MS02 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRGV1A0A0A0MS02 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC13.8□□□□□ -0.2
TRGV1A0A0A0MS02 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC13.8□□□□□ -0.2
TRGV1A0A0A0MS02 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRGV1A0A0A0MS02 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRGV1A0A0A0MS02 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
TRGV1A0A0A0MS02 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRGV1A0A0A0MS02 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRGV1A0A0A0MS02 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRGV1A0A0A0MS02 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRGV1A0A0A0MS02 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
TRGV1A0A0A0MS02 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC13.79□□□□□ -0.2
TRGV1A0A0A0MS02 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRGV1A0A0A0MS02 AL161938.1-201ENST00000569833 2180 ntBASIC13.79□□□□□ -0.2
TRGV1A0A0A0MS02 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRGV1A0A0A0MS02 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
TRGV1A0A0A0MS02 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC13.79□□□□□ -0.2
TRGV1A0A0A0MS02 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRGV1A0A0A0MS02 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRGV1A0A0A0MS02 KRT18P29-201ENST00000397031 1267 ntBASIC13.79□□□□□ -0.2
TRGV1A0A0A0MS02 SERF2-207ENST00000409614 582 ntTSL 2 BASIC13.79□□□□□ -0.2
TRGV1A0A0A0MS02 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 145.7 ms