Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 SHF-207ENST00000560540 2062 ntTSL 5 BASIC30.19■■■□□ 2.42
DDX49Q9Y6V7 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC30.19■■■□□ 2.42
DDX49Q9Y6V7 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
DDX49Q9Y6V7 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
DDX49Q9Y6V7 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
DDX49Q9Y6V7 RNF166-209ENST00000567844 633 ntTSL 5 BASIC30.18■■■□□ 2.42
DDX49Q9Y6V7 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC30.18■■■□□ 2.42
DDX49Q9Y6V7 AC135731.1-201ENST00000569415 2548 ntBASIC30.17■■■□□ 2.42
DDX49Q9Y6V7 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC30.17■■■□□ 2.42
DDX49Q9Y6V7 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC30.17■■■□□ 2.42
DDX49Q9Y6V7 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
DDX49Q9Y6V7 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
DDX49Q9Y6V7 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC30.16■■■□□ 2.42
DDX49Q9Y6V7 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
DDX49Q9Y6V7 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
DDX49Q9Y6V7 AC016575.1-201ENST00000607026 382 ntBASIC30.14■■■□□ 2.42
DDX49Q9Y6V7 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.42
DDX49Q9Y6V7 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC30.14■■■□□ 2.41
DDX49Q9Y6V7 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC30.14■■■□□ 2.41
DDX49Q9Y6V7 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
DDX49Q9Y6V7 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
DDX49Q9Y6V7 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
DDX49Q9Y6V7 MIR3648-2-201ENST00000581792 180 ntBASIC30.11■■■□□ 2.41
DDX49Q9Y6V7 MIR3648-1-201ENST00000615959 180 ntBASIC30.11■■■□□ 2.41
DDX49Q9Y6V7 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
DDX49Q9Y6V7 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC30.1■■■□□ 2.41
DDX49Q9Y6V7 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
DDX49Q9Y6V7 DUX4L11-201ENST00000611504 1267 ntBASIC30.1■■■□□ 2.41
DDX49Q9Y6V7 DUX4L12-201ENST00000614593 1267 ntBASIC30.1■■■□□ 2.41
DDX49Q9Y6V7 DUX4L14-201ENST00000621227 1267 ntBASIC30.1■■■□□ 2.41
DDX49Q9Y6V7 CR559946.2-201ENST00000623684 991 ntBASIC30.1■■■□□ 2.41
DDX49Q9Y6V7 GDI1-215ENST00000630693 786 ntTSL 4 BASIC30.1■■■□□ 2.41
DDX49Q9Y6V7 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
DDX49Q9Y6V7 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC30.1■■■□□ 2.41
DDX49Q9Y6V7 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
DDX49Q9Y6V7 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
DDX49Q9Y6V7 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
DDX49Q9Y6V7 MACF1-219ENST00000484793 834 ntTSL 2 BASIC30.08■■■□□ 2.41
DDX49Q9Y6V7 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC30.07■■■□□ 2.4
DDX49Q9Y6V7 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
DDX49Q9Y6V7 MIR639-201ENST00000384974 98 ntBASIC30.07■■■□□ 2.4
DDX49Q9Y6V7 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
DDX49Q9Y6V7 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC30.06■■■□□ 2.4
DDX49Q9Y6V7 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC30.06■■■□□ 2.4
DDX49Q9Y6V7 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
DDX49Q9Y6V7 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC30.06■■■□□ 2.4
DDX49Q9Y6V7 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC30.06■■■□□ 2.4
DDX49Q9Y6V7 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
DDX49Q9Y6V7 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC30.05■■■□□ 2.4
DDX49Q9Y6V7 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC30.05■■■□□ 2.4
DDX49Q9Y6V7 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
DDX49Q9Y6V7 MIR4449-201ENST00000578365 66 ntBASIC30.05■■■□□ 2.4
DDX49Q9Y6V7 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
DDX49Q9Y6V7 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC30.04■■■□□ 2.4
DDX49Q9Y6V7 LINC01971-201ENST00000617888 1048 ntBASIC30.04■■■□□ 2.4
DDX49Q9Y6V7 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC30.04■■■□□ 2.4
DDX49Q9Y6V7 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
DDX49Q9Y6V7 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC30.03■■■□□ 2.4
DDX49Q9Y6V7 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
DDX49Q9Y6V7 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
DDX49Q9Y6V7 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
DDX49Q9Y6V7 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
DDX49Q9Y6V7 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
DDX49Q9Y6V7 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC30■■■□□ 2.39
DDX49Q9Y6V7 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC29.99■■■□□ 2.39
DDX49Q9Y6V7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC29.99■■■□□ 2.39
DDX49Q9Y6V7 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC29.99■■■□□ 2.39
DDX49Q9Y6V7 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
DDX49Q9Y6V7 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
DDX49Q9Y6V7 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
DDX49Q9Y6V7 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
DDX49Q9Y6V7 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
DDX49Q9Y6V7 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC29.97■■■□□ 2.39
DDX49Q9Y6V7 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC29.97■■■□□ 2.39
DDX49Q9Y6V7 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC29.96■■■□□ 2.39
DDX49Q9Y6V7 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC29.96■■■□□ 2.39
DDX49Q9Y6V7 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC29.96■■■□□ 2.39
DDX49Q9Y6V7 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
DDX49Q9Y6V7 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC29.95■■■□□ 2.38
DDX49Q9Y6V7 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC29.94■■■□□ 2.38
DDX49Q9Y6V7 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
DDX49Q9Y6V7 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC29.94■■■□□ 2.38
DDX49Q9Y6V7 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
DDX49Q9Y6V7 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC29.94■■■□□ 2.38
DDX49Q9Y6V7 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
DDX49Q9Y6V7 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
DDX49Q9Y6V7 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC29.93■■■□□ 2.38
DDX49Q9Y6V7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
DDX49Q9Y6V7 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC29.93■■■□□ 2.38
DDX49Q9Y6V7 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC29.93■■■□□ 2.38
DDX49Q9Y6V7 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
DDX49Q9Y6V7 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
DDX49Q9Y6V7 BX255925.1-201ENST00000566954 1854 ntBASIC29.92■■■□□ 2.38
DDX49Q9Y6V7 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
DDX49Q9Y6V7 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
DDX49Q9Y6V7 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC29.91■■■□□ 2.38
DDX49Q9Y6V7 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
DDX49Q9Y6V7 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC29.9■■■□□ 2.38
DDX49Q9Y6V7 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC29.9■■■□□ 2.38
DDX49Q9Y6V7 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC29.9■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms