Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
COMMD4Q9H0A8 AP002414.2-202ENST00000590929 1450 ntBASIC22.27■■□□□ 1.16
COMMD4Q9H0A8 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC22.27■■□□□ 1.15
COMMD4Q9H0A8 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COMMD4Q9H0A8 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COMMD4Q9H0A8 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COMMD4Q9H0A8 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COMMD4Q9H0A8 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
COMMD4Q9H0A8 AC136428.2-201ENST00000563187 214 ntBASIC22.25■■□□□ 1.15
COMMD4Q9H0A8 CAHM-201ENST00000604200 896 ntBASIC22.25■■□□□ 1.15
COMMD4Q9H0A8 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
COMMD4Q9H0A8 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
COMMD4Q9H0A8 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
COMMD4Q9H0A8 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC22.24■■□□□ 1.15
COMMD4Q9H0A8 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
COMMD4Q9H0A8 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COMMD4Q9H0A8 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.23■■□□□ 1.15
COMMD4Q9H0A8 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COMMD4Q9H0A8 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC22.23■■□□□ 1.15
COMMD4Q9H0A8 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
COMMD4Q9H0A8 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COMMD4Q9H0A8 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
COMMD4Q9H0A8 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
COMMD4Q9H0A8 AC097358.2-201ENST00000607541 1159 ntBASIC22.22■■□□□ 1.15
COMMD4Q9H0A8 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COMMD4Q9H0A8 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC22.22■■□□□ 1.15
COMMD4Q9H0A8 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
COMMD4Q9H0A8 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
COMMD4Q9H0A8 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
COMMD4Q9H0A8 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.21■■□□□ 1.15
COMMD4Q9H0A8 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
COMMD4Q9H0A8 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC22.21■■□□□ 1.15
COMMD4Q9H0A8 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
COMMD4Q9H0A8 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
COMMD4Q9H0A8 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC22.2■■□□□ 1.14
COMMD4Q9H0A8 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
COMMD4Q9H0A8 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
COMMD4Q9H0A8 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
COMMD4Q9H0A8 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC22.19■■□□□ 1.14
COMMD4Q9H0A8 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
COMMD4Q9H0A8 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
COMMD4Q9H0A8 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
COMMD4Q9H0A8 PKM-203ENST00000389093 2279 ntTSL 5 BASIC22.19■■□□□ 1.14
COMMD4Q9H0A8 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
COMMD4Q9H0A8 RPS2-209ENST00000529806 993 ntTSL 3 BASIC22.18■■□□□ 1.14
COMMD4Q9H0A8 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC22.18■■□□□ 1.14
COMMD4Q9H0A8 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COMMD4Q9H0A8 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC22.17■■□□□ 1.14
COMMD4Q9H0A8 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
COMMD4Q9H0A8 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COMMD4Q9H0A8 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
COMMD4Q9H0A8 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC22.17■■□□□ 1.14
COMMD4Q9H0A8 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
COMMD4Q9H0A8 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.16■■□□□ 1.14
COMMD4Q9H0A8 MEST-211ENST00000437945 1455 ntTSL 5 BASIC22.16■■□□□ 1.14
COMMD4Q9H0A8 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC22.16■■□□□ 1.14
COMMD4Q9H0A8 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
COMMD4Q9H0A8 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
COMMD4Q9H0A8 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC22.15■■□□□ 1.14
COMMD4Q9H0A8 MIR762-201ENST00000390236 83 ntBASIC22.13■■□□□ 1.13
COMMD4Q9H0A8 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
COMMD4Q9H0A8 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC22.12■■□□□ 1.13
COMMD4Q9H0A8 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC22.12■■□□□ 1.13
COMMD4Q9H0A8 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC22.12■■□□□ 1.13
COMMD4Q9H0A8 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
COMMD4Q9H0A8 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
COMMD4Q9H0A8 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC22.12■■□□□ 1.13
COMMD4Q9H0A8 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
COMMD4Q9H0A8 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC22.11■■□□□ 1.13
COMMD4Q9H0A8 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
COMMD4Q9H0A8 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
COMMD4Q9H0A8 AC018358.1-201ENST00000631079 1402 ntBASIC22.11■■□□□ 1.13
COMMD4Q9H0A8 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
COMMD4Q9H0A8 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
COMMD4Q9H0A8 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
COMMD4Q9H0A8 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
COMMD4Q9H0A8 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
COMMD4Q9H0A8 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
COMMD4Q9H0A8 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
COMMD4Q9H0A8 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC22.09■■□□□ 1.13
COMMD4Q9H0A8 CHML-205ENST00000638160 705 ntTSL 3 BASIC22.09■■□□□ 1.13
COMMD4Q9H0A8 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
COMMD4Q9H0A8 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.09■■□□□ 1.13
COMMD4Q9H0A8 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
COMMD4Q9H0A8 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC22.09■■□□□ 1.13
COMMD4Q9H0A8 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
COMMD4Q9H0A8 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
COMMD4Q9H0A8 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
COMMD4Q9H0A8 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
COMMD4Q9H0A8 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
COMMD4Q9H0A8 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
COMMD4Q9H0A8 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.12
COMMD4Q9H0A8 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.12
COMMD4Q9H0A8 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
COMMD4Q9H0A8 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
COMMD4Q9H0A8 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
COMMD4Q9H0A8 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
COMMD4Q9H0A8 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC22.07■■□□□ 1.12
COMMD4Q9H0A8 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC22.07■■□□□ 1.12
COMMD4Q9H0A8 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC22.07■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms