Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
FOXC2Q99958 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
FOXC2Q99958 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
FOXC2Q99958 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
FOXC2Q99958 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
FOXC2Q99958 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
FOXC2Q99958 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
FOXC2Q99958 WHAMMP2-203ENST00000563942 1603 ntBASIC21.61■■□□□ 1.05
FOXC2Q99958 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
FOXC2Q99958 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
FOXC2Q99958 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.6■■□□□ 1.05
FOXC2Q99958 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.6■■□□□ 1.05
FOXC2Q99958 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
FOXC2Q99958 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
FOXC2Q99958 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
FOXC2Q99958 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
FOXC2Q99958 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.58■■□□□ 1.05
FOXC2Q99958 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.58■■□□□ 1.05
FOXC2Q99958 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.58■■□□□ 1.05
FOXC2Q99958 DUX4L18-201ENST00000553347 1267 ntBASIC21.58■■□□□ 1.05
FOXC2Q99958 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.04
FOXC2Q99958 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
FOXC2Q99958 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
FOXC2Q99958 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.56■■□□□ 1.04
FOXC2Q99958 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
FOXC2Q99958 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
FOXC2Q99958 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
FOXC2Q99958 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.55■■□□□ 1.04
FOXC2Q99958 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
FOXC2Q99958 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
FOXC2Q99958 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
FOXC2Q99958 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
FOXC2Q99958 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
FOXC2Q99958 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.54■■□□□ 1.04
FOXC2Q99958 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
FOXC2Q99958 AC007029.1-201ENST00000604183 313 ntBASIC21.54■■□□□ 1.04
FOXC2Q99958 AL592293.1-201ENST00000502889 1188 ntBASIC21.53■■□□□ 1.04
FOXC2Q99958 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
FOXC2Q99958 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.53■■□□□ 1.04
FOXC2Q99958 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.53■■□□□ 1.04
FOXC2Q99958 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.53■■□□□ 1.04
FOXC2Q99958 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.53■■□□□ 1.04
FOXC2Q99958 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC21.52■■□□□ 1.04
FOXC2Q99958 AL161658.1-201ENST00000623641 1967 ntBASIC21.52■■□□□ 1.04
FOXC2Q99958 AC133552.2-201ENST00000619106 1032 ntBASIC21.52■■□□□ 1.04
FOXC2Q99958 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
FOXC2Q99958 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
FOXC2Q99958 AC127502.1-201ENST00000399971 1502 ntBASIC21.51■■□□□ 1.03
FOXC2Q99958 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.51■■□□□ 1.03
FOXC2Q99958 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.51■■□□□ 1.03
FOXC2Q99958 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
FOXC2Q99958 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
FOXC2Q99958 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
FOXC2Q99958 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.5■■□□□ 1.03
FOXC2Q99958 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
FOXC2Q99958 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC21.49■■□□□ 1.03
FOXC2Q99958 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.49■■□□□ 1.03
FOXC2Q99958 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
FOXC2Q99958 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
FOXC2Q99958 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.48■■□□□ 1.03
FOXC2Q99958 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
FOXC2Q99958 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
FOXC2Q99958 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC21.48■■□□□ 1.03
FOXC2Q99958 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
FOXC2Q99958 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
FOXC2Q99958 AC009831.1-201ENST00000580420 1582 ntBASIC21.48■■□□□ 1.03
FOXC2Q99958 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
FOXC2Q99958 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
FOXC2Q99958 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
FOXC2Q99958 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
FOXC2Q99958 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
FOXC2Q99958 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.47■■□□□ 1.03
FOXC2Q99958 AL157400.5-201ENST00000507624 621 ntBASIC21.47■■□□□ 1.03
FOXC2Q99958 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
FOXC2Q99958 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
FOXC2Q99958 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
FOXC2Q99958 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
FOXC2Q99958 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
FOXC2Q99958 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
FOXC2Q99958 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
FOXC2Q99958 AC131212.1-201ENST00000613771 668 ntBASIC21.46■■□□□ 1.03
FOXC2Q99958 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
FOXC2Q99958 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.46■■□□□ 1.03
FOXC2Q99958 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
FOXC2Q99958 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
FOXC2Q99958 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.45■■□□□ 1.02
FOXC2Q99958 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
FOXC2Q99958 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.45■■□□□ 1.02
FOXC2Q99958 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.45■■□□□ 1.02
FOXC2Q99958 AC074183.2-201ENST00000623112 922 ntBASIC21.45■■□□□ 1.02
FOXC2Q99958 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
FOXC2Q99958 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
FOXC2Q99958 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
FOXC2Q99958 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.44■■□□□ 1.02
FOXC2Q99958 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.44■■□□□ 1.02
FOXC2Q99958 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
FOXC2Q99958 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.44■■□□□ 1.02
FOXC2Q99958 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
FOXC2Q99958 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
FOXC2Q99958 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms