Protein–RNA interactions for Protein: Q99884

SLC6A7, Sodium-dependent proline transporter, humanhuman

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A7Q99884 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
SLC6A7Q99884 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
SLC6A7Q99884 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
SLC6A7Q99884 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.87■■□□□ 1.09
SLC6A7Q99884 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SLC6A7Q99884 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLC6A7Q99884 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLC6A7Q99884 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLC6A7Q99884 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SLC6A7Q99884 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SLC6A7Q99884 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.86■■□□□ 1.09
SLC6A7Q99884 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SLC6A7Q99884 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.86■■□□□ 1.09
SLC6A7Q99884 DUX4L29-201ENST00000425409 679 ntBASIC21.86■■□□□ 1.09
SLC6A7Q99884 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SLC6A7Q99884 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SLC6A7Q99884 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
SLC6A7Q99884 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SLC6A7Q99884 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SLC6A7Q99884 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SLC6A7Q99884 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.85■■□□□ 1.09
SLC6A7Q99884 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SLC6A7Q99884 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SLC6A7Q99884 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLC6A7Q99884 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.84■■□□□ 1.09
SLC6A7Q99884 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.84■■□□□ 1.09
SLC6A7Q99884 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.84■■□□□ 1.09
SLC6A7Q99884 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.84■■□□□ 1.09
SLC6A7Q99884 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLC6A7Q99884 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SLC6A7Q99884 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SLC6A7Q99884 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SLC6A7Q99884 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
SLC6A7Q99884 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SLC6A7Q99884 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SLC6A7Q99884 BX255925.1-201ENST00000566954 1854 ntBASIC21.83■■□□□ 1.08
SLC6A7Q99884 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC6A7Q99884 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
SLC6A7Q99884 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC6A7Q99884 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.82■■□□□ 1.08
SLC6A7Q99884 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC6A7Q99884 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC6A7Q99884 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.81■■□□□ 1.08
SLC6A7Q99884 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.81■■□□□ 1.08
SLC6A7Q99884 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.81■■□□□ 1.08
SLC6A7Q99884 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
SLC6A7Q99884 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC6A7Q99884 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC6A7Q99884 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC6A7Q99884 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
SLC6A7Q99884 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SLC6A7Q99884 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.78■■□□□ 1.08
SLC6A7Q99884 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
SLC6A7Q99884 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.78■■□□□ 1.08
SLC6A7Q99884 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
SLC6A7Q99884 AC010864.1-201ENST00000609407 1511 ntBASIC21.77■■□□□ 1.08
SLC6A7Q99884 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC6A7Q99884 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC6A7Q99884 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC6A7Q99884 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC6A7Q99884 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SLC6A7Q99884 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC21.77■■□□□ 1.08
SLC6A7Q99884 AC021231.2-201ENST00000594613 730 ntBASIC21.77■■□□□ 1.08
SLC6A7Q99884 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.77■■□□□ 1.08
SLC6A7Q99884 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SLC6A7Q99884 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SLC6A7Q99884 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SLC6A7Q99884 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC6A7Q99884 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SLC6A7Q99884 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.76■■□□□ 1.07
SLC6A7Q99884 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC6A7Q99884 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.75■■□□□ 1.07
SLC6A7Q99884 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SLC6A7Q99884 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SLC6A7Q99884 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC6A7Q99884 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.74■■□□□ 1.07
SLC6A7Q99884 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC6A7Q99884 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SLC6A7Q99884 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
SLC6A7Q99884 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.74■■□□□ 1.07
SLC6A7Q99884 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SLC6A7Q99884 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.72■■□□□ 1.07
SLC6A7Q99884 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC6A7Q99884 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
SLC6A7Q99884 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC6A7Q99884 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.71■■□□□ 1.07
SLC6A7Q99884 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.71■■□□□ 1.07
SLC6A7Q99884 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC6A7Q99884 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC6A7Q99884 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.7■■□□□ 1.07
SLC6A7Q99884 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC6A7Q99884 AC108673.1-201ENST00000510422 1159 ntBASIC21.7■■□□□ 1.06
SLC6A7Q99884 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
SLC6A7Q99884 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC6A7Q99884 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
SLC6A7Q99884 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC6A7Q99884 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.69■■□□□ 1.06
SLC6A7Q99884 MIR6090-201ENST00000622481 60 ntBASIC21.69■■□□□ 1.06
SLC6A7Q99884 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC6A7Q99884 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms