Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 YBX1P4-201ENST00000392794 808 ntBASIC23.89■■□□□ 1.42
CHD6Q8TD26 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CHD6Q8TD26 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CHD6Q8TD26 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
CHD6Q8TD26 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CHD6Q8TD26 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC23.88■■□□□ 1.41
CHD6Q8TD26 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC23.88■■□□□ 1.41
CHD6Q8TD26 BEX3-202ENST00000372634 753 ntTSL 2 BASIC23.88■■□□□ 1.41
CHD6Q8TD26 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
CHD6Q8TD26 AC103834.1-201ENST00000520383 144 ntBASIC23.87■■□□□ 1.41
CHD6Q8TD26 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CHD6Q8TD26 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.87■■□□□ 1.41
CHD6Q8TD26 AC148477.6-201ENST00000623746 465 ntBASIC23.87■■□□□ 1.41
CHD6Q8TD26 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC23.86■■□□□ 1.41
CHD6Q8TD26 ECEL1P2-201ENST00000461596 1295 ntBASIC23.86■■□□□ 1.41
CHD6Q8TD26 AC104564.3-201ENST00000582367 638 ntBASIC23.86■■□□□ 1.41
CHD6Q8TD26 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.85■■□□□ 1.41
CHD6Q8TD26 AC133552.2-201ENST00000619106 1032 ntBASIC23.84■■□□□ 1.41
CHD6Q8TD26 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CHD6Q8TD26 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC23.83■■□□□ 1.41
CHD6Q8TD26 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
CHD6Q8TD26 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC23.83■■□□□ 1.4
CHD6Q8TD26 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
CHD6Q8TD26 AC026271.2-201ENST00000428091 497 ntBASIC23.82■■□□□ 1.4
CHD6Q8TD26 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CHD6Q8TD26 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CHD6Q8TD26 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC23.81■■□□□ 1.4
CHD6Q8TD26 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CHD6Q8TD26 AL139246.5-201ENST00000606645 996 ntBASIC23.81■■□□□ 1.4
CHD6Q8TD26 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.81■■□□□ 1.4
CHD6Q8TD26 BHLHE23-202ENST00000612929 1109 ntBASIC23.81■■□□□ 1.4
CHD6Q8TD26 AC009831.1-201ENST00000580420 1582 ntBASIC23.8■■□□□ 1.4
CHD6Q8TD26 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
CHD6Q8TD26 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CHD6Q8TD26 AC103724.3-201ENST00000564481 992 ntBASIC23.79■■□□□ 1.4
CHD6Q8TD26 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHD6Q8TD26 LINC00273-201ENST00000539813 1452 ntBASIC23.79■■□□□ 1.4
CHD6Q8TD26 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHD6Q8TD26 AL592293.1-201ENST00000502889 1188 ntBASIC23.79■■□□□ 1.4
CHD6Q8TD26 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.79■■□□□ 1.4
CHD6Q8TD26 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CHD6Q8TD26 AC007029.1-201ENST00000604183 313 ntBASIC23.78■■□□□ 1.4
CHD6Q8TD26 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.78■■□□□ 1.4
CHD6Q8TD26 RARRES2P6-201ENST00000567333 442 ntBASIC23.78■■□□□ 1.4
CHD6Q8TD26 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.77■■□□□ 1.4
CHD6Q8TD26 AC074183.2-201ENST00000623112 922 ntBASIC23.77■■□□□ 1.4
CHD6Q8TD26 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.77■■□□□ 1.4
CHD6Q8TD26 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHD6Q8TD26 AC239859.2-201ENST00000444165 318 ntBASIC23.77■■□□□ 1.4
CHD6Q8TD26 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC23.77■■□□□ 1.4
CHD6Q8TD26 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC23.77■■□□□ 1.4
CHD6Q8TD26 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
CHD6Q8TD26 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHD6Q8TD26 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CHD6Q8TD26 MIR6765-201ENST00000614092 87 ntBASIC23.76■■□□□ 1.39
CHD6Q8TD26 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
CHD6Q8TD26 MIR4508-201ENST00000584178 70 ntBASIC23.75■■□□□ 1.39
CHD6Q8TD26 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.75■■□□□ 1.39
CHD6Q8TD26 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CHD6Q8TD26 SMPD5-203ENST00000639008 1464 ntBASIC23.75■■□□□ 1.39
CHD6Q8TD26 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
CHD6Q8TD26 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.75■■□□□ 1.39
CHD6Q8TD26 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
CHD6Q8TD26 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.75■■□□□ 1.39
CHD6Q8TD26 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CHD6Q8TD26 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC23.74■■□□□ 1.39
CHD6Q8TD26 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC23.74■■□□□ 1.39
CHD6Q8TD26 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
CHD6Q8TD26 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
CHD6Q8TD26 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CHD6Q8TD26 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.74■■□□□ 1.39
CHD6Q8TD26 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
CHD6Q8TD26 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CHD6Q8TD26 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC23.73■■□□□ 1.39
CHD6Q8TD26 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CHD6Q8TD26 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
CHD6Q8TD26 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CHD6Q8TD26 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.72■■□□□ 1.39
CHD6Q8TD26 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CHD6Q8TD26 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CHD6Q8TD26 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
CHD6Q8TD26 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CHD6Q8TD26 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CHD6Q8TD26 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC23.72■■□□□ 1.39
CHD6Q8TD26 Z92544.1-202ENST00000571933 1220 ntBASIC23.71■■□□□ 1.39
CHD6Q8TD26 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CHD6Q8TD26 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC23.71■■□□□ 1.39
CHD6Q8TD26 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
CHD6Q8TD26 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.7■■□□□ 1.39
CHD6Q8TD26 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.7■■□□□ 1.38
CHD6Q8TD26 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
CHD6Q8TD26 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
CHD6Q8TD26 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
CHD6Q8TD26 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.69■■□□□ 1.38
CHD6Q8TD26 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CHD6Q8TD26 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC23.68■■□□□ 1.38
CHD6Q8TD26 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CHD6Q8TD26 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC23.68■■□□□ 1.38
CHD6Q8TD26 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CHD6Q8TD26 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms