Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 THA1P-201ENST00000590384 1145 ntBASIC21.74■■□□□ 1.07
CCDC168Q8NDH2 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC168Q8NDH2 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC168Q8NDH2 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.72■■□□□ 1.07
CCDC168Q8NDH2 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC168Q8NDH2 KRT8P33-201ENST00000508125 1423 ntBASIC21.71■■□□□ 1.07
CCDC168Q8NDH2 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CCDC168Q8NDH2 ECEL1P2-201ENST00000461596 1295 ntBASIC21.71■■□□□ 1.07
CCDC168Q8NDH2 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC168Q8NDH2 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC168Q8NDH2 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC168Q8NDH2 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC168Q8NDH2 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.7■■□□□ 1.06
CCDC168Q8NDH2 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC168Q8NDH2 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC168Q8NDH2 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC168Q8NDH2 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC168Q8NDH2 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC21.7■■□□□ 1.06
CCDC168Q8NDH2 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC168Q8NDH2 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
CCDC168Q8NDH2 AL356441.2-201ENST00000443009 864 ntBASIC21.69■■□□□ 1.06
CCDC168Q8NDH2 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC168Q8NDH2 AC133552.2-201ENST00000619106 1032 ntBASIC21.69■■□□□ 1.06
CCDC168Q8NDH2 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.69■■□□□ 1.06
CCDC168Q8NDH2 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC168Q8NDH2 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.68■■□□□ 1.06
CCDC168Q8NDH2 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
CCDC168Q8NDH2 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC168Q8NDH2 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.68■■□□□ 1.06
CCDC168Q8NDH2 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.68■■□□□ 1.06
CCDC168Q8NDH2 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC168Q8NDH2 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC168Q8NDH2 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC168Q8NDH2 RP9P-202ENST00000450133 1212 ntBASIC21.67■■□□□ 1.06
CCDC168Q8NDH2 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.67■■□□□ 1.06
CCDC168Q8NDH2 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.67■■□□□ 1.06
CCDC168Q8NDH2 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CCDC168Q8NDH2 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC168Q8NDH2 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC168Q8NDH2 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC168Q8NDH2 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC168Q8NDH2 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.65■■□□□ 1.06
CCDC168Q8NDH2 AL157400.5-201ENST00000507624 621 ntBASIC21.65■■□□□ 1.06
CCDC168Q8NDH2 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.65■■□□□ 1.06
CCDC168Q8NDH2 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.64■■□□□ 1.06
CCDC168Q8NDH2 DUX4L9-201ENST00000449051 1259 ntBASIC21.64■■□□□ 1.05
CCDC168Q8NDH2 WHAMMP2-203ENST00000563942 1603 ntBASIC21.64■■□□□ 1.05
CCDC168Q8NDH2 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC168Q8NDH2 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC168Q8NDH2 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC168Q8NDH2 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.63■■□□□ 1.05
CCDC168Q8NDH2 AC009831.1-201ENST00000580420 1582 ntBASIC21.63■■□□□ 1.05
CCDC168Q8NDH2 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.63■■□□□ 1.05
CCDC168Q8NDH2 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.63■■□□□ 1.05
CCDC168Q8NDH2 AC007029.1-201ENST00000604183 313 ntBASIC21.63■■□□□ 1.05
CCDC168Q8NDH2 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC168Q8NDH2 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC168Q8NDH2 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC168Q8NDH2 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC168Q8NDH2 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC168Q8NDH2 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.62■■□□□ 1.05
CCDC168Q8NDH2 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC21.62■■□□□ 1.05
CCDC168Q8NDH2 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CCDC168Q8NDH2 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC168Q8NDH2 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC168Q8NDH2 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC168Q8NDH2 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CCDC168Q8NDH2 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC168Q8NDH2 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC168Q8NDH2 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC168Q8NDH2 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.61■■□□□ 1.05
CCDC168Q8NDH2 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.61■■□□□ 1.05
CCDC168Q8NDH2 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC168Q8NDH2 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.61■■□□□ 1.05
CCDC168Q8NDH2 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.61■■□□□ 1.05
CCDC168Q8NDH2 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC168Q8NDH2 AC010980.1-201ENST00000587192 1142 ntBASIC21.6■■□□□ 1.05
CCDC168Q8NDH2 AC135983.2-203ENST00000454486 1613 ntBASIC21.6■■□□□ 1.05
CCDC168Q8NDH2 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.6■■□□□ 1.05
CCDC168Q8NDH2 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC168Q8NDH2 AC110285.7-201ENST00000624417 1536 ntBASIC21.6■■□□□ 1.05
CCDC168Q8NDH2 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CCDC168Q8NDH2 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC168Q8NDH2 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CCDC168Q8NDH2 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC168Q8NDH2 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC168Q8NDH2 AL592293.1-201ENST00000502889 1188 ntBASIC21.58■■□□□ 1.05
CCDC168Q8NDH2 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.58■■□□□ 1.05
CCDC168Q8NDH2 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC168Q8NDH2 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.58■■□□□ 1.05
CCDC168Q8NDH2 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCDC168Q8NDH2 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCDC168Q8NDH2 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC168Q8NDH2 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC168Q8NDH2 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.57■■□□□ 1.04
CCDC168Q8NDH2 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC168Q8NDH2 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC168Q8NDH2 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC168Q8NDH2 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.57■■□□□ 1.04
CCDC168Q8NDH2 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms