Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
SMC5Q8IY18 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC31.65■■■□□ 2.66
SMC5Q8IY18 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
SMC5Q8IY18 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
SMC5Q8IY18 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC31.65■■■□□ 2.66
SMC5Q8IY18 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
SMC5Q8IY18 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC31.64■■■□□ 2.66
SMC5Q8IY18 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
SMC5Q8IY18 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC31.64■■■□□ 2.66
SMC5Q8IY18 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
SMC5Q8IY18 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC31.63■■■□□ 2.65
SMC5Q8IY18 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC31.63■■■□□ 2.65
SMC5Q8IY18 CALM3-209ENST00000597743 577 ntTSL 4 BASIC31.63■■■□□ 2.65
SMC5Q8IY18 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
SMC5Q8IY18 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC31.63■■■□□ 2.65
SMC5Q8IY18 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
SMC5Q8IY18 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
SMC5Q8IY18 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC31.62■■■□□ 2.65
SMC5Q8IY18 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
SMC5Q8IY18 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
SMC5Q8IY18 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC31.61■■■□□ 2.65
SMC5Q8IY18 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC31.6■■■□□ 2.65
SMC5Q8IY18 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC31.6■■■□□ 2.65
SMC5Q8IY18 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
SMC5Q8IY18 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC31.59■■■□□ 2.65
SMC5Q8IY18 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
SMC5Q8IY18 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC31.58■■■□□ 2.65
SMC5Q8IY18 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
SMC5Q8IY18 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
SMC5Q8IY18 CIB2-204ENST00000557846 934 ntTSL 3 BASIC31.58■■■□□ 2.65
SMC5Q8IY18 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
SMC5Q8IY18 AC018358.1-201ENST00000631079 1402 ntBASIC31.58■■■□□ 2.65
SMC5Q8IY18 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC31.57■■■□□ 2.64
SMC5Q8IY18 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC31.57■■■□□ 2.64
SMC5Q8IY18 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
SMC5Q8IY18 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC31.56■■■□□ 2.64
SMC5Q8IY18 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC31.56■■■□□ 2.64
SMC5Q8IY18 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
SMC5Q8IY18 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
SMC5Q8IY18 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
SMC5Q8IY18 AC044849.2-201ENST00000606596 710 ntBASIC31.55■■■□□ 2.64
SMC5Q8IY18 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
SMC5Q8IY18 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC31.55■■■□□ 2.64
SMC5Q8IY18 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC31.55■■■□□ 2.64
SMC5Q8IY18 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
SMC5Q8IY18 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
SMC5Q8IY18 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
SMC5Q8IY18 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
SMC5Q8IY18 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
SMC5Q8IY18 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
SMC5Q8IY18 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC31.52■■■□□ 2.64
SMC5Q8IY18 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC31.52■■■□□ 2.64
SMC5Q8IY18 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC31.51■■■□□ 2.63
SMC5Q8IY18 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
SMC5Q8IY18 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC31.51■■■□□ 2.63
SMC5Q8IY18 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
SMC5Q8IY18 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC31.5■■■□□ 2.63
SMC5Q8IY18 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC31.5■■■□□ 2.63
SMC5Q8IY18 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
SMC5Q8IY18 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SMC5Q8IY18 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC31.49■■■□□ 2.63
SMC5Q8IY18 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
SMC5Q8IY18 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SMC5Q8IY18 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
SMC5Q8IY18 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC31.48■■■□□ 2.63
SMC5Q8IY18 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC31.48■■■□□ 2.63
SMC5Q8IY18 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
SMC5Q8IY18 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
SMC5Q8IY18 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
SMC5Q8IY18 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC31.47■■■□□ 2.63
SMC5Q8IY18 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
SMC5Q8IY18 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
SMC5Q8IY18 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC31.46■■■□□ 2.63
SMC5Q8IY18 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
SMC5Q8IY18 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.63
SMC5Q8IY18 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
SMC5Q8IY18 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC31.45■■■□□ 2.63
SMC5Q8IY18 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC31.44■■■□□ 2.62
SMC5Q8IY18 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
SMC5Q8IY18 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
SMC5Q8IY18 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
SMC5Q8IY18 BOD1-206ENST00000480951 814 ntTSL 2 BASIC31.43■■■□□ 2.62
SMC5Q8IY18 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
SMC5Q8IY18 AC021231.2-201ENST00000594613 730 ntBASIC31.41■■■□□ 2.62
SMC5Q8IY18 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC31.41■■■□□ 2.62
SMC5Q8IY18 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC31.41■■■□□ 2.62
SMC5Q8IY18 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC31.4■■■□□ 2.62
SMC5Q8IY18 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC31.39■■■□□ 2.62
SMC5Q8IY18 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC31.39■■■□□ 2.62
SMC5Q8IY18 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC31.39■■■□□ 2.62
SMC5Q8IY18 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
SMC5Q8IY18 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC31.38■■■□□ 2.61
SMC5Q8IY18 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
SMC5Q8IY18 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
SMC5Q8IY18 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
SMC5Q8IY18 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC31.37■■■□□ 2.61
SMC5Q8IY18 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
SMC5Q8IY18 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
SMC5Q8IY18 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC31.36■■■□□ 2.61
SMC5Q8IY18 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC31.36■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms