Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
CRLF3Q8IUI8 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
CRLF3Q8IUI8 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CRLF3Q8IUI8 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CRLF3Q8IUI8 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CRLF3Q8IUI8 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC25.16■■□□□ 1.62
CRLF3Q8IUI8 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
CRLF3Q8IUI8 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CRLF3Q8IUI8 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CRLF3Q8IUI8 MIR762-201ENST00000390236 83 ntBASIC25.15■■□□□ 1.62
CRLF3Q8IUI8 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC25.15■■□□□ 1.62
CRLF3Q8IUI8 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
CRLF3Q8IUI8 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.62
CRLF3Q8IUI8 CHML-205ENST00000638160 705 ntTSL 3 BASIC25.14■■□□□ 1.62
CRLF3Q8IUI8 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
CRLF3Q8IUI8 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC25.13■■□□□ 1.61
CRLF3Q8IUI8 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.13■■□□□ 1.61
CRLF3Q8IUI8 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC25.13■■□□□ 1.61
CRLF3Q8IUI8 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CRLF3Q8IUI8 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC25.12■■□□□ 1.61
CRLF3Q8IUI8 DENR-202ENST00000455982 1052 ntTSL 5 BASIC25.12■■□□□ 1.61
CRLF3Q8IUI8 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC25.12■■□□□ 1.61
CRLF3Q8IUI8 MIR3665-201ENST00000578708 105 ntBASIC25.12■■□□□ 1.61
CRLF3Q8IUI8 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CRLF3Q8IUI8 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC25.12■■□□□ 1.61
CRLF3Q8IUI8 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
CRLF3Q8IUI8 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CRLF3Q8IUI8 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.11■■□□□ 1.61
CRLF3Q8IUI8 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CRLF3Q8IUI8 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CRLF3Q8IUI8 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CRLF3Q8IUI8 AC127502.1-201ENST00000399971 1502 ntBASIC25.09■■□□□ 1.61
CRLF3Q8IUI8 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CRLF3Q8IUI8 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CRLF3Q8IUI8 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC25.09■■□□□ 1.61
CRLF3Q8IUI8 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC25.08■■□□□ 1.61
CRLF3Q8IUI8 DUX4L28-201ENST00000623687 678 ntBASIC25.08■■□□□ 1.61
CRLF3Q8IUI8 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.08■■□□□ 1.61
CRLF3Q8IUI8 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CRLF3Q8IUI8 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
CRLF3Q8IUI8 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC25.07■■□□□ 1.6
CRLF3Q8IUI8 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
CRLF3Q8IUI8 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CRLF3Q8IUI8 AL449106.1-201ENST00000608517 1980 ntBASIC25.06■■□□□ 1.6
CRLF3Q8IUI8 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CRLF3Q8IUI8 AC005559.1-201ENST00000589661 871 ntBASIC25.06■■□□□ 1.6
CRLF3Q8IUI8 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CRLF3Q8IUI8 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CRLF3Q8IUI8 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CRLF3Q8IUI8 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC25.05■■□□□ 1.6
CRLF3Q8IUI8 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.05■■□□□ 1.6
CRLF3Q8IUI8 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
CRLF3Q8IUI8 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CRLF3Q8IUI8 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
CRLF3Q8IUI8 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
CRLF3Q8IUI8 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.03■■□□□ 1.6
CRLF3Q8IUI8 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC25.03■■□□□ 1.6
CRLF3Q8IUI8 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC25.03■■□□□ 1.6
CRLF3Q8IUI8 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC25.03■■□□□ 1.6
CRLF3Q8IUI8 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CRLF3Q8IUI8 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
CRLF3Q8IUI8 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
CRLF3Q8IUI8 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC25.01■■□□□ 1.59
CRLF3Q8IUI8 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
CRLF3Q8IUI8 AC100797.4-201ENST00000631653 1827 ntBASIC25■■□□□ 1.59
CRLF3Q8IUI8 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
CRLF3Q8IUI8 AC087741.3-201ENST00000624270 1347 ntBASIC25■■□□□ 1.59
CRLF3Q8IUI8 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC25■■□□□ 1.59
CRLF3Q8IUI8 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CRLF3Q8IUI8 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CRLF3Q8IUI8 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CRLF3Q8IUI8 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
CRLF3Q8IUI8 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.99■■□□□ 1.59
CRLF3Q8IUI8 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
CRLF3Q8IUI8 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CRLF3Q8IUI8 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CRLF3Q8IUI8 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CRLF3Q8IUI8 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
CRLF3Q8IUI8 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC24.97■■□□□ 1.59
CRLF3Q8IUI8 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CRLF3Q8IUI8 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CRLF3Q8IUI8 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CRLF3Q8IUI8 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CRLF3Q8IUI8 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
CRLF3Q8IUI8 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC24.96■■□□□ 1.59
CRLF3Q8IUI8 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.96■■□□□ 1.59
CRLF3Q8IUI8 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CRLF3Q8IUI8 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CRLF3Q8IUI8 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CRLF3Q8IUI8 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC24.95■■□□□ 1.58
CRLF3Q8IUI8 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CRLF3Q8IUI8 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24.94■■□□□ 1.58
CRLF3Q8IUI8 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC24.94■■□□□ 1.58
CRLF3Q8IUI8 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CRLF3Q8IUI8 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.94■■□□□ 1.58
CRLF3Q8IUI8 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
CRLF3Q8IUI8 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
CRLF3Q8IUI8 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
CRLF3Q8IUI8 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC24.93■■□□□ 1.58
CRLF3Q8IUI8 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.93■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms